prot_Ecto-sp13_S_contig60397.16671.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60397.16671.1
Unique Nameprot_Ecto-sp13_S_contig60397.16671.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: A0A6H5K5W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W6_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 6.400e-26
Identity = 48/49 (97.96%), Postives = 49/49 (100.00%), Query Frame = 0
Query:    1 MLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKPIR 49
            MLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKP+R
Sbjct:  123 MLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKPMR 171          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: D7G2B3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2B3_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 7.730e-25
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
Query:    1 MLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKPIR 49
            MLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKPIR
Sbjct:  196 MLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKPIR 244          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: A0A835ZA45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA45_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.130e-15
Identity = 34/41 (82.93%), Postives = 39/41 (95.12%), Query Frame = 0
Query:    3 VSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKF 43
            VSGNI+SSA+NEERI CHFQGKQYLGWKA R+K+KEL+EKF
Sbjct:  190 VSGNIMSSADNEERIMCHFQGKQYLGWKACREKVKELREKF 230          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: A0A7S1BBZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BBZ4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.260e-11
Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    3 VSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKP 47
            VSGN +SS +  ERI  HF GKQY+GWK VRDKLKEL +K+  +P
Sbjct:  112 VSGNFMSSRDANERIAAHFAGKQYVGWKKVRDKLKELDKKYAGRP 156          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: A0A7S3UYV8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYV8_HETAK)

HSP 1 Score: 62.4 bits (150), Expect = 4.530e-10
Identity = 25/40 (62.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    3 VSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEK 42
            +SGN++SS +N+ERI  HFQGK Y+GWKAVRDK+ E++E+
Sbjct:  198 ISGNLMSSTDNDERIDAHFQGKLYIGWKAVRDKVAEIEER 237          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: A0A7S2LLV4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLV4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.210e-10
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    3 VSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKP 47
            VSGN +SS + +ERI  H+ GKQY+GWK VR+K KEL EK+ N P
Sbjct:  312 VSGNFMSSRDADERIAAHYAGKQYVGWKMVREKCKELDEKYRNLP 356          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: A0A7S2D4R8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4R8_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.050e-9
Identity = 23/39 (58.97%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    2 LVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELK 40
            +VSGN +++ +N +R+RCHF+GKQY GWK +RDKL EL+
Sbjct:  200 VVSGNFMNATDNGDRLRCHFEGKQYQGWKRIRDKLAELR 238          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: A0A7S1CYK9_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYK9_CYCTE)

HSP 1 Score: 57.4 bits (137), Expect = 3.460e-9
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    3 VSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKF 43
            VSGN +S+ + +ERI  H+ GKQY+GWK VRDKLKEL+  +
Sbjct:   34 VSGNFMSARDADERIAAHYAGKQYVGWKLVRDKLKELQSTY 74          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: B8BQQ5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQQ5_THAPS)

HSP 1 Score: 59.7 bits (143), Expect = 4.060e-9
Identity = 26/40 (65.00%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    3 VSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEK 42
            VSGN +SS + +ERI  H+ GKQY+GWK VRDKLKEL++K
Sbjct:  339 VSGNFMSSRDADERIAAHYAGKQYVGWKLVRDKLKELQKK 378          
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Match: A0A7S2RM59_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM59_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 7.180e-9
Identity = 23/38 (60.53%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    3 VSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELK 40
            VSGN ++S++N +R+RCHF+GKQY GW+ +RDKL  LK
Sbjct:  216 VSGNFMNSSDNGDRLRCHFEGKQYQGWRKIRDKLAVLK 253          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60397.16671.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5W6_9PHAE6.400e-2697.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2B3_ECTSI7.730e-25100.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZA45_9STRA1.130e-1582.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1BBZ4_9STRA7.260e-1162.22Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S3UYV8_HETAK4.530e-1062.50Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2LLV4_9STRA6.210e-1060.00Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2D4R8_9STRA2.050e-958.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1CYK9_CYCTE3.460e-958.54Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
B8BQQ5_THAPS4.060e-965.00Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2RM59_9STRA7.180e-960.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004882Luc7-relatedPFAMPF03194LUC7coord: 3..46
e-value: 3.8E-11
score: 43.1
IPR004882Luc7-relatedPANTHERPTHR12375RNA-BINDING PROTEIN LUC7-RELATEDcoord: 3..45
NoneNo IPR availablePANTHERPTHR12375:SF18LUC7-LIKE PROTEIN 3coord: 3..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60397contigEcto-sp13_S_contig60397:546..695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60397.16671.1mRNA_Ecto-sp13_S_contig60397.16671.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60397 546..695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60397.16671.1 ID=prot_Ecto-sp13_S_contig60397.16671.1|Name=mRNA_Ecto-sp13_S_contig60397.16671.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
MLVSGNILSSAENEERIRCHFQGKQYLGWKAVRDKLKELKEKFENKPIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004882Luc7-rel