prot_Ecto-sp13_S_contig6001.16596.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6001.16596.1
Unique Nameprot_Ecto-sp13_S_contig6001.16596.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length212
Homology
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: D7FK62_ECTSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK62_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 1.430e-132
Identity = 204/211 (96.68%), Postives = 204/211 (96.68%), Query Frame = 0
Query:    1 MNLAMRGSPLSSGAIRRLARLPTPSLQSAPRLSTACGLTPTSASRLSVAASPIPSPFQHGSRRPASTTIGSSDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
            MNLAMRGSPLSSGAIRRLAR PTPSLQSAPR STACG TPTSASRLS AASP PSPFQHGSRRPASTTIGS DSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPD TLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR
Sbjct:    1 MNLAMRGSPLSSGAIRRLARAPTPSLQSAPRFSTACGFTPTSASRLSAAASPRPSPFQHGSRRPASTTIGSGDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: A0A6H5K3Y3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Y3_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 2.020e-66
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0
Query:  105 MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMR 210
            MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPD TLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMR
Sbjct:    1 MAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMR 106          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: A0A835Z0M6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M6_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.080e-41
Identity = 74/138 (53.62%), Postives = 97/138 (70.29%), Query Frame = 0
Query:   74 STTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
            ST+++ +A+G   KR+LY GH P SP QR  +   +  +A  DPERADMVA LGE TG  AL+Q++  ML DP+G E+LR RP ++E +VDL AL  LP  T GK+Y++FM  N F+PD R PV++VDD DLAYVM R
Sbjct:    7 STSSSKSAAGEPCKRILYKGHNPISPSQRVGLTFISAFSAFADPERADMVAALGETTGHRALKQMHHRMLQDPDGIELLRERPQLDEHSVDLEALGQLPSGTFGKAYADFMAHNQFTPDSRLPVRFVDDADLAYVMAR 144          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: A0A7M7T4E7_STRPU (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7T4E7_STRPU)

HSP 1 Score: 139 bits (351), Expect = 2.620e-37
Identity = 69/130 (53.08%), Postives = 88/130 (67.69%), Query Frame = 0
Query:   82 SGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
            S P    +LY  H PT+P+Q+  +   +   +L DP R DMVA LGE TG +AL +L+R M  DP GR+IL  RP IN  TVD+  LA+LPDDT GK Y +FMK+N  S D R PV++VDDPDLAYV++R
Sbjct:   32 SAPNVDGLLYEHHTPTTPIQKMLLTAGSAFMSLYDPYRHDMVAVLGETTGSVALPRLHRLMKEDPVGRQILEERPRINSDTVDMKYLASLPDDTFGKLYHDFMKKNKISADTRDPVRFVDDPDLAYVLQR 161          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: A0A485K2E7_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K2E7_9STRA)

HSP 1 Score: 137 bits (346), Expect = 1.700e-36
Identity = 75/155 (48.39%), Postives = 99/155 (63.87%), Query Frame = 0
Query:   57 FQHGSRRPASTTIGSSDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
             +H  RR A  T  ++ STT+   A+G   K VLY  H PTSPLQ+ A+A  +  T   DPER DM+A LG+VTG +AL Q++  M +DP GR+IL  +P      VD+ AL  LP DT G +Y+ FM  + F  DGR+ VK+VDDP+LAYVM+R
Sbjct:   12 LRHPDRRAAVATATAALSTTS---AAGLPTKHVLYKAHVPTSPLQKIAVAVGSAFTVFTDPERGDMLAALGDVTGAVALRQMHLKMYSDPVGRQILAEKPRFRSHLVDIDALRLLPTDTFGFAYTQFMDAHGFEADGRADVKFVDDPELAYVMQR 163          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: A0A813SSC9_9BILA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813SSC9_9BILA)

HSP 1 Score: 135 bits (339), Expect = 6.700e-36
Identity = 63/122 (51.64%), Postives = 85/122 (69.67%), Query Frame = 0
Query:   90 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
            LYS H PTS LQ++ +A  + + ++ DP R DM++  GE TG LAL+ + + M+ DPEG +ILR RP+IN +TVDL  L  LP  TLGK YSNF+ +   +PD R PV ++DD DLAY+MRR
Sbjct:    4 LYSSHIPTSFLQKSLLAVGSGIMSISDPSRDDMISVFGETTGSLALKYIQQKMILDPEGEQILRDRPIINSSTVDLEQLKMLPAGTLGKEYSNFLSKYTLTPDARRPVNFIDDRDLAYIMRR 125          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: A0A819M3J9_9BILA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819M3J9_9BILA)

HSP 1 Score: 134 bits (338), Expect = 9.460e-36
Identity = 62/122 (50.82%), Postives = 86/122 (70.49%), Query Frame = 0
Query:   90 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
            LY+ H+PT+ +Q++ +A  + +T+++DP R DM++  GE TG LAL+ +   M  DPEG +IL+ RPVIN  TVDL  L  LP  TLGK YSNF+ + N +PD R PV ++DD DLAY+MRR
Sbjct:    4 LYATHKPTNLIQKSILAVGSGITSILDPSRDDMISVFGETTGILALKYIQEKMTIDPEGDQILKKRPVINTTTVDLDYLKTLPTGTLGKEYSNFLAKYNLTPDARRPVSFIDDADLAYIMRR 125          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: D0NLX9_PHYIT (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLX9_PHYIT)

HSP 1 Score: 135 bits (339), Expect = 1.220e-35
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 0
Query:   87 KRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
            +R+ Y  H PTSPLQ+  ++  + +T   +PER DM+A LGEVTGR AL +++  M ADP G  IL  +PVI    +D+  L ALP+D+ G+ Y+ FM  + F  DGRSPV++VDDP+LAYVM+R
Sbjct:   10 RRIQYDSHMPTSPLQKLVLSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNDKIDMDYLRALPEDSFGRRYATFMDSHGFDADGRSPVRFVDDPELAYVMQR 134          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: A0A662WU27_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WU27_9STRA)

HSP 1 Score: 133 bits (335), Expect = 3.940e-35
Identity = 63/125 (50.40%), Postives = 85/125 (68.00%), Query Frame = 0
Query:   87 KRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
            +RV+Y  H PT+PLQ+  ++  + VT   +PER DM+A LGEVTGR AL Q++  M ADP G  IL  +PVI    +D+  L ALP D+ G +Y+ FM  + F  DGRS V++VDDP+LAYVM+R
Sbjct:    2 RRVMYDSHMPTTPLQKLLLSVASAVTVFANPERGDMLAALGEVTGRDALRQIHARMCADPVGARILAEKPVIRNEQIDMPYLRALPSDSFGHAYATFMDSHGFDADGRSLVRFVDDPELAYVMQR 126          
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Match: A0A7R8ZZ82_9CRUS (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8ZZ82_9CRUS)

HSP 1 Score: 134 bits (336), Expect = 4.870e-35
Identity = 66/122 (54.10%), Postives = 87/122 (71.31%), Query Frame = 0
Query:   90 LYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRR 211
            LY GH  T+PLQ+  +   +T+ AL  P R DMVA  GEVTG LAL  ++R ML D EG++ILR +P +N  TVDL AL +LP+ TLG++Y+ F+  N  SPD R PV++VDDP+LAYVM+R
Sbjct:   42 LYPGHIRTTPLQKALLGVGSTLMALYSPARDDMVAVNGEVTGMLALPWMHRKMLEDAEGQQILREKPKLNSYTVDLDALRSLPEGTLGRAYTQFLDVNGVSPDTRLPVRFVDDPELAYVMQR 163          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6001.16596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK62_ECTSI1.430e-13296.68Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6H5K3Y3_9PHAE2.020e-6699.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z0M6_9STRA1.080e-4153.62Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7M7T4E7_STRPU2.620e-3753.08Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A485K2E7_9STRA1.700e-3648.39Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A813SSC9_9BILA6.700e-3651.64Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A819M3J9_9BILA9.460e-3650.82Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
D0NLX9_PHYIT1.220e-3549.60Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A662WU27_9STRA3.940e-3550.40Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7R8ZZ82_9CRUS4.870e-3554.10Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007715Ubiquinone biosynthesis protein Coq4PFAMPF05019Coq4coord: 91..211
e-value: 2.6E-44
score: 151.2
IPR007715Ubiquinone biosynthesis protein Coq4PANTHERPTHR12922UBIQUINONE BIOSYNTHESIS PROTEINcoord: 89..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6001contigEcto-sp13_S_contig6001:5672..7949 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6001.16596.1mRNA_Ecto-sp13_S_contig6001.16596.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6001 5612..8620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6001.16596.1 ID=prot_Ecto-sp13_S_contig6001.16596.1|Name=mRNA_Ecto-sp13_S_contig6001.16596.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
MNLAMRGSPLSSGAIRRLARLPTPSLQSAPRLSTACGLTPTSASRLSVAA
SPIPSPFQHGSRRPASTTIGSSDSTTANTTASGPAAKRVLYSGHQPTSPL
QRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGRE
ILRARPVINEATVDLAALAALPDDTLGKSYSNFMKENNFSPDGRSPVKYV
DDPDLAYVMRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007715Coq4