prot_Ecto-sp13_S_contig6000.16593.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6000.16593.1
Unique Nameprot_Ecto-sp13_S_contig6000.16593.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length392
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6000.16593.1 vs. uniprot
Match: D8LUA4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA4_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 8.130e-144
Identity = 272/391 (69.57%), Postives = 284/391 (72.63%), Query Frame = 0 
Query:    1 MNVLRACRLYNRRLCERFLASGGKSSPTVRLYISVSGPEDVEGICSDGLSALGRPAVVLFPDPRQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQDQMDTDAQERPPRRGGGRGAAGSGERGPNRRIGVQKGAXXXXXXXXXXXASLARVGGATVPAELLERVEASGRVTRVMGQAPAGGGEGRESSPTSSSTPEGKALADAGGEAEDSGGAAQGTSYFIFPERCFPLALPEFHVLCASGAVGEDKRSLDGALSKLGADNLLGPGPAADLLLQLENKTEEQVKAYLERMQEDVTPAEASRLQATHGNLRWKAANVASLRAGADEQRALQEAILRHDTQEEHENKADGGGGTATRAQQAQVSLPSRT 391
            MNVLRACRLYNRRLCE FLASGGKSSPTVRLYISVSG            + + + AV+L PD                                                         Q Q+DT+AQERP              RGPNRRIGVQKG XXXXXXXXXX ASLARVGGATVPAEL+ERVEASGRVTRV+GQAPAGGG GRESSPTSSSTPE  A ADAGGEAEDSGGAA+G SYFIFPERCFPLALPEFHVLCASGAVGEDKRSLDGALSKLGADNLLGP PAADLLLQ+ENK EEQVKAYL+RMQEDVTPAEASRLQATHGNLRWKAANVASLRA ADEQRALQEAILRH+TQEE E      GGT TRAQQAQVSLPSRT
Sbjct:  314 MNVLRACRLYNRRLCEGFLASGGKSSPTVRLYISVSG------------AVILQLAVILPPD---------------------------------------------------------QAQIDTNAQERPXXXXXXXXXXXXXARGPNRRIGVQKGXXXXXXXXXXX-ASLARVGGATVPAELVERVEASGRVTRVVGQAPAGGGAGRESSPTSSSTPERNAFADAGGEAEDSGGAAKGASYFIFPERCFPLALPEFHVLCASGAVGEDKRSLDGALSKLGADNLLGPAPAADLLLQVENKMEEQVKAYLKRMQEDVTPAEASRLQATHGNLRWKAANVASLRADADEQRALQEAILRHETQEEQEXXXXXXGGTVTRAQQAQVSLPSRT 634
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6000.16593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUA4_ECTSI8.130e-14469.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6000contigEcto-sp13_S_contig6000:2074..5721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6000.16593.1mRNA_Ecto-sp13_S_contig6000.16593.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6000 142..5835 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6000.16593.1 ID=prot_Ecto-sp13_S_contig6000.16593.1|Name=mRNA_Ecto-sp13_S_contig6000.16593.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=392bp
MNVLRACRLYNRRLCERFLASGGKSSPTVRLYISVSGPEDVEGICSDGLS
ALGRPAVVLFPDPRQAAAAAAAAAAVSTTSSSSGTSSTATTAAAAATPIT
TADASGAVILQLAVILPPDQDQMDTDAQERPPRRGGGRGAAGSGERGPNR
RIGVQKGAGAGAGAGGGGGASLARVGGATVPAELLERVEASGRVTRVMGQ
APAGGGEGRESSPTSSSTPEGKALADAGGEAEDSGGAAQGTSYFIFPERC
FPLALPEFHVLCASGAVGEDKRSLDGALSKLGADNLLGPGPAADLLLQLE
NKTEEQVKAYLERMQEDVTPAEASRLQATHGNLRWKAANVASLRAGADEQ
RALQEAILRHDTQEEHENKADGGGGTATRAQQAQVSLPSRT*
back to top