prot_Ecto-sp13_S_contig5982.16557.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5982.16557.1
Unique Nameprot_Ecto-sp13_S_contig5982.16557.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length193
Homology
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA)

HSP 1 Score: 298 bits (764), Expect = 4.200e-101
Identity = 148/192 (77.08%), Postives = 170/192 (88.54%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            MGIDL AGGRRVGHK R+ P SDNVYL LLVKL+RFLARRTDS F  VVLKRLYMS+TNR PLS+SRLAR+M++K+  TAV+VGTVTDD RLLEVPK+SVCALRFTETARARIL +GGEC+TFDQLALRAPKG+ TVLLRGPK  RE  +HFGHR+T  ++ THD VKPY+RSKGRKFE+ARGRR++NGFK+
Sbjct:    1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.200e-100
Identity = 151/192 (78.65%), Postives = 168/192 (87.50%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            MGIDL AGGRRVGHKVRTSPKS NVYL LLV+L+RFLARRTDS F  VVLKRLYMSKTN  P+S+SRL RYM+ KE  TAV+VGTVTDD RLL++P L VCAL+FTE ARARIL AGGE +TFDQLAL+ PKGA TVLLRGPKNAREAVRHFGHR+T++++HTH  VKPY+RSKGRKFEKARGRR S GFKV
Sbjct:    1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA)

HSP 1 Score: 296 bits (757), Expect = 4.900e-100
Identity = 149/192 (77.60%), Postives = 169/192 (88.02%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            MGIDLVAGGRRVGHK R++PKSDNVYLGLL KL++FLARRT+S F   VLKRLYMSKTNR PL L RL+++M  K+  TAV+V TVTDD RLLEVPK++VCALRFTE+AR+RI+AAGGEC+TFDQLAL+ P G+N VLLRGPKNAREA RHFGHRTTV N HTH+ VKPY+RSKGRKFEKARGRR SNGFKV
Sbjct:    1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN)

HSP 1 Score: 291 bits (744), Expect = 4.680e-98
Identity = 146/192 (76.04%), Postives = 165/192 (85.94%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            MGID+VAGGRRVGHK RT  KS+NVYL LLVKL+RFLARRTDSAF   VLKRL+MS+TNR PLSLS LAR+MR K+   AVLVGT+TDD R+L VPK++VCALRFTETARARI+ AGGEC+TFDQLALRAPKG+NTVLLRGPK ARE   HFGHR+T  ++ TH  VKPY+R+KGRKFEKARGRR S GFKV
Sbjct:    1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA)

HSP 1 Score: 282 bits (721), Expect = 1.440e-94
Identity = 143/192 (74.48%), Postives = 165/192 (85.94%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            MGIDL +GGRR GHK RT+PKSDNVYL LLVKL+RFLARRTDS F  V+LKRL+MSK NR P+++SRL R+M+ KE  TAV+VGT+TDD R+LEVPKLSV AL+ T TARARIL AGGE +TFD+LALRAPKG N VLLRGP + REA+ HFGHR+TV N+HTHD+VKPY RSKGRKFEKARGRRRS GFK+
Sbjct:    1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: A0A8D0ZR79_PIG (Ribosomal_L18e/L15P domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A8D0ZR79_PIG)

HSP 1 Score: 280 bits (716), Expect = 2.420e-94
Identity = 146/157 (92.99%), Postives = 150/157 (95.54%), Query Frame = 0
Query:   36 FLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            FL RRTDSAFA VVLKRLYMSKTNRAPLSLSRL   +RNKETSTAVLVGTVTDDVRLL VPKLSVCALRFTETARARILAAGGECITFDQLALRAPKG NTVLLRGPKNAREAVRHFGH+TTVNNLHTHDSVKPY+RSKGRKFEKARGRRRSNGFK+
Sbjct:    2 FLTRRTDSAFAKVVLKRLYMSKTNRAPLSLSRL---VRNKETSTAVLVGTVTDDVRLLAVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGTNTVLLRGPKNAREAVRHFGHKTTVNNLHTHDSVKPYVRSKGRKFEKARGRRRSNGFKI 155          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: A0A7S2BC13_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BC13_9STRA)

HSP 1 Score: 279 bits (713), Expect = 3.700e-93
Identity = 145/194 (74.74%), Postives = 165/194 (85.05%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETS--TAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            MGIDLVAGGRRVGHKVRT+P SDNVYL LLVKL+ FLARRT S F   V KRL+MSKTN+ P+S+S++A+YM  +E    TAV+VGTVTDD+RL E+P L VCALRFTE ARARI+ AGGEC+TFDQLAL APKG+N VLLRG  N REA++HFGHR TV NLHTHD+VKPY+RSKGRKFEKARGRRRS GFKV
Sbjct:   12 MGIDLVAGGRRVGHKVRTAPVSDNVYLKLLVKLYAFLARRTGSDFCKTVTKRLFMSKTNKPPISVSKIAKYMTPQEGKGKTAVIVGTVTDDIRLSELPALRVCALRFTEGARARIVKAGGECLTFDQLALEAPKGSNCVLLRGSMN-REALKHFGHRCTVKNLHTHDNVKPYVRSKGRKFEKARGRRRSTGFKV 204          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: A0A5D6XV36_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XV36_9STRA)

HSP 1 Score: 276 bits (707), Expect = 2.830e-92
Identity = 138/191 (72.25%), Postives = 164/191 (85.86%), Query Frame = 0
Query:    2 GIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            GIDL+AGG+ VG K RT+PKS+NVYL LLV+L+RFLARRT+S F ++VL+RLY S TN+AP+S+ R+ARYM   E   AV+VGTVTDD+RLL VPK+SV AL FTETARARI  AGGEC++FDQLALRAPKGANTVLLRG + ARE  RHFGH++TVN++HTHD VKPY+RSKGRKFE ARGRR+S GFKV
Sbjct:   12 GIDLIAGGKVVGKKNRTAPKSENVYLNLLVRLYRFLARRTNSKFNSIVLRRLYQSNTNQAPMSIGRVARYMTGHEGKLAVIVGTVTDDIRLLNVPKVSVVALAFTETARARITNAGGECLSFDQLALRAPKGANTVLLRGRRTAREVYRHFGHKSTVNSVHTHDHVKPYVRSKGRKFEMARGRRKSRGFKV 202          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: H3GFQ7_PHYRM (Ribosomal_L18e/L15P domain-containing protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3GFQ7_PHYRM)

HSP 1 Score: 272 bits (696), Expect = 9.520e-91
Identity = 135/192 (70.31%), Postives = 164/192 (85.42%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            MGIDLVAGG+ VG K RT+PKSDNVYL LLV+L+RFLARRTD+ F ++VL+RLY S TN+APLSL ++AR+M+  E   AV+V TVTDD+RLL VPKL+VCAL F+ETARARI+  GGEC++FDQLALRAPKGANTVLLRG + AR    HFGH++T+ ++HTHD VKPY+RSKGRKFE+ARGRR+S GFKV
Sbjct:    1 MGIDLVAGGKVVGKKNRTNPKSDNVYLNLLVRLYRFLARRTDAKFNDIVLRRLYQSNTNQAPLSLGKVARFMKKHEGKIAVVVATVTDDIRLLNVPKLTVCALSFSETARARIVKNGGECLSFDQLALRAPKGANTVLLRGARKARGVYAHFGHKSTLESVHTHDHVKPYVRSKGRKFEQARGRRKSRGFKV 192          
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Match: A0A024TMV8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=8 Tax=Eukaryota TaxID=2759 RepID=A0A024TMV8_9STRA)

HSP 1 Score: 272 bits (696), Expect = 9.520e-91
Identity = 134/192 (69.79%), Postives = 164/192 (85.42%), Query Frame = 0
Query:    1 MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVLKRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSVCALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVRHFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV 192
            MG D+VAGG+  G K RT+PKS+NVYL LLV+L+RFLARRTD+ F   VLKRLYMS+TN+ P+S++R+ARYM+NKE   AV+VGT+TDD+RL +VPKL++ AL FTE+ARAR+L AGGE +TFDQLALRAPKG NTVLLRG K ARE  RHFGH +T+++++THD VKPY+RSKGRKFEKARGRR S GFKV
Sbjct:    1 MGKDIVAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNQNVLKRLYMSRTNQPPMSIARVARYMKNKEDQIAVVVGTITDDIRLFDVPKLTIAALGFTESARARVLKAGGEILTFDQLALRAPKGQNTVLLRGRKTAREVYRHFGHESTLDSVNTHDHVKPYVRSKGRKFEKARGRRNSRGFKV 192          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5982.16557.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3NFY8_9STRA4.200e-10177.08Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2UVJ6_9STRA1.200e-10078.65Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZAE3_9STRA4.900e-10077.60Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonem... [more]
F0Y951_AURAN4.680e-9876.04Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A4D9D1Z3_9STRA1.440e-9474.48Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A8D0ZR79_PIG2.420e-9492.99Ribosomal_L18e/L15P domain-containing protein n=3 ... [more]
A0A7S2BC13_9STRA3.700e-9374.74Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5D6XV36_9STRA2.830e-9272.25Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
H3GFQ7_PHYRM9.520e-9170.31Ribosomal_L18e/L15P domain-containing protein n=23... [more]
A0A024TMV8_9STRA9.520e-9169.79Ribosomal_L18e/L15P domain-containing protein n=8 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021131Ribosomal protein L18e/L15PPFAMPF17135Ribosomal_L18coord: 2..192
e-value: 1.3E-86
score: 288.8
NoneNo IPR availableGENE3D3.100.10.10coord: 1..192
e-value: 4.3E-85
score: 285.9
IPR000039Ribosomal protein L18ePANTHERPTHR1093460S RIBOSOMAL PROTEIN L18coord: 1..191
IPR021132Ribosomal protein L18e, conserved sitePROSITEPS01106RIBOSOMAL_L18Ecoord: 51..68
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 21..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5982contigEcto-sp13_S_contig5982:5576..7840 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5982.16557.1mRNA_Ecto-sp13_S_contig5982.16557.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5982 5576..7840 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5982.16557.1 ID=prot_Ecto-sp13_S_contig5982.16557.1|Name=mRNA_Ecto-sp13_S_contig5982.16557.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=193bp
MGIDLVAGGRRVGHKVRTSPKSDNVYLGLLVKLFRFLARRTDSAFANVVL
KRLYMSKTNRAPLSLSRLARYMRNKETSTAVLVGTVTDDVRLLEVPKLSV
CALRFTETARARILAAGGECITFDQLALRAPKGANTVLLRGPKNAREAVR
HFGHRTTVNNLHTHDSVKPYIRSKGRKFEKARGRRRSNGFKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021131Ribosomal_L18e/L15P
IPR000039Ribosomal_L18e
IPR021132Ribosomal_L18e_CS
IPR036227L18e/L15P_sf