prot_Ecto-sp13_S_contig5954.16507.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5954.16507.1
Unique Nameprot_Ecto-sp13_S_contig5954.16507.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length76
Homology
BLAST of mRNA_Ecto-sp13_S_contig5954.16507.1 vs. uniprot
Match: D7G1T8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T8_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 1.280e-26
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0
Query:    1 LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAK 52
            LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAK
Sbjct:  227 LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAK 278          
BLAST of mRNA_Ecto-sp13_S_contig5954.16507.1 vs. uniprot
Match: A0A482RU92_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU92_9ARCH)

HSP 1 Score: 62.4 bits (150), Expect = 1.190e-9
Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 0
Query:    1 LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKVFTPLAVLKEDNYFAQTSRNL 73
            L ++ +PTV+CF+DG+A   ++GF+GLT GL     DEWP   LAR L    +     VL E+    Q+ + L
Sbjct:  242 LIIRTMPTVVCFVDGIAQDKVVGFEGLTEGLEEGHEDEWPTVRLARLLVSKHMLRKDLVLDEEEVAVQSQQTL 314          
BLAST of mRNA_Ecto-sp13_S_contig5954.16507.1 vs. uniprot
Match: A0A835YQ77_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ77_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 3.420e-7
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAK 52
            LQV++LP V+ F DG++V  I GF+GL         DEWP  NLA+ LALAK
Sbjct:  230 LQVRVLPCVVIFRDGISVAQIQGFEGLNEEQEKGTEDEWPTGNLAKRLALAK 281          
BLAST of mRNA_Ecto-sp13_S_contig5954.16507.1 vs. uniprot
Match: A0A7S3H0T6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H0T6_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 1.570e-6
Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = 0
Query:    1 LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKVFTPLAVLKEDN 64
            L ++ +PTV+ F+DGVA+  I+GF+ L   +PP + D WP   LAR LA         ++ +D 
Sbjct:  193 LVIRTMPTVVIFLDGVAIDKILGFEELADSMPPGQEDSWPTIVLARLLAAKGGINSKVIVDDDE 256          
BLAST of mRNA_Ecto-sp13_S_contig5954.16507.1 vs. uniprot
Match: J9IP16_9SPIT (Thioredoxin domain-containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IP16_9SPIT)

HSP 1 Score: 52.4 bits (124), Expect = 3.600e-6
Identity = 27/71 (38.03%), Postives = 42/71 (59.15%), Query Frame = 0
Query:    1 LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKVFTPLAVLKEDNYFAQTSR 71
            LQV++LPT+ICFIDGVAV  ++GF+ L A       D++P+  L R L  + V   L+  ++   F +  +
Sbjct:  176 LQVQVLPTIICFIDGVAVDRVVGFEDLGAK------DDFPMIALTRRLIRSGVLKALSKAEKGQIFVKRGK 240          
BLAST of mRNA_Ecto-sp13_S_contig5954.16507.1 vs. uniprot
Match: A0A077ZT00_STYLE (Phosducin-like protein 3 isoform 1 n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A077ZT00_STYLE)

HSP 1 Score: 51.2 bits (121), Expect = 9.290e-6
Identity = 27/57 (47.37%), Postives = 37/57 (64.91%), Query Frame = 0
Query:    1 LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKVFTPL 57
            LQV++LPT+ICFIDG+AV  I+GF+ L A       D++P  +L R L  + V  PL
Sbjct:  173 LQVQVLPTMICFIDGIAVDRIVGFEDLGAR------DDFPQISLTRRLIRSGVLKPL 223          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5954.16507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G1T8_ECTSI1.280e-26100.00Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
A0A482RU92_9ARCH1.190e-939.73Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A835YQ77_9STRA3.420e-751.92Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
A0A7S3H0T6_9STRA1.570e-637.50Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
J9IP16_9SPIT3.600e-638.03Thioredoxin domain-containing protein n=1 Tax=Oxyt... [more]
A0A077ZT00_STYLE9.290e-647.37Phosducin-like protein 3 isoform 1 n=1 Tax=Stylony... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5954contigEcto-sp13_S_contig5954:29..256 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5954.16507.1mRNA_Ecto-sp13_S_contig5954.16507.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5954 29..256 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5954.16507.1 ID=prot_Ecto-sp13_S_contig5954.16507.1|Name=mRNA_Ecto-sp13_S_contig5954.16507.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=76bp
LQVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELAL
AKVFTPLAVLKEDNYFAQTSRNLFI*
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