prot_Ecto-sp13_S_contig594.16490.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig594.16490.1
Unique Nameprot_Ecto-sp13_S_contig594.16490.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length542
Homology
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: D8LNR2_ECTSI (Zinc finger, C2H2 type family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNR2_ECTSI)

HSP 1 Score: 780 bits (2013), Expect = 5.210e-272
Identity = 498/549 (90.71%), Postives = 507/549 (92.35%), Query Frame = 0
Query:    1 MMPSPSTGNVTAAYRGGDDRFGGDDEGVNPTVERGVPAEKEQLRRNLSLLKKKMHGQAGSRRSQSAGPRAGELFGDPNAAPSGPGGPDSHVEGGGRQHLHMTTGTAPAMMPADPGAFLRDRDAAGRALGRRGVGGGARRRPPTDGLGSPYAIDPNPRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHQACI--NPAGGRRHGPFEGKHDSRRAGFNSTRTAAPADVAKSRPHDESGAGDVGGGGTGYTRRGTHAAAPARAGGGRACVGGAPGGQGSPDRRRAWEGDNGGXXXX-SQGDXXXXXXXXXXXXXXXXXXXXXD-----DGYVDDLPPDAFPDEQVELEQCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGXXXXXXXXXXXGPPGGYDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSGSLLGQAARKTASGASGKGRGQRW 541
            MMPSPSTGN+TAAYRGG DRFGGDDEG+NP VERGVPAEKEQLRRNLSLLKKKMHGQAGSRRSQSAGPRAGELFGDPNAAPSGPGG DSH+EGGGRQHLHMTTGTAPAMMPADPGAFLRDRDAA RALGRRGVGGGAR     DG GSPYAIDPN RGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        NPAGGRRHGPFEGKHDS R GF S RTAAPADVA+SRPHD SGAGDVGGGGT YTRRGTHAAAPAR GGGRA VGGA GGQGSPDRRRAWEG+NGGXXXX SQGDXXXXXXXXXXXXXXXXXXXX       +GY DDLPPDAFPDEQVELE+CRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGG   XXXXXXXX PP G+DDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNI+AKPSVLKKGSGSLLGQAARKTASGASGKGRGQRW
Sbjct:  515 MMPSPSTGNLTAAYRGGGDRFGGDDEGMNPPVERGVPAEKEQLRRNLSLLKKKMHGQAGSRRSQSAGPRAGELFGDPNAAPSGPGGVDSHLEGGGRQHLHMTTGTAPAMMPADPGAFLRDRDAAERALGRRGVGGGARXXXXPDGPGSPYAIDPNARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTNPAGGRRHGPFEGKHDSPRTGFTSGRTAAPADVARSRPHDHSGAGDVGGGGTRYTRRGTHAAAPARPGGGRARVGGASGGQGSPDRRRAWEGENGGXXXXXSQGDXXXXXXXXXXXXXXXXXXXXGXXXXXXEGYADDLPPDAFPDEQVELEECRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGRGGXXXXXXXXXPPRGFDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIRAKPSVLKKGSGSLLGQAARKTASGASGKGRGQRW 1063          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A835Z9Y9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Y9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.280e-38
Identity = 102/187 (54.55%), Postives = 124/187 (66.31%), Query Frame = 0
Query:  345 VELEQCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKE----KGRAGGXXXXXXXXXXXGPPGGYDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSGSLLGQAARK 527
            V+L+QC  CGRRF   A  KH   C +VF  KRK FD A+MR+ GTE+ +F  +    +G A  XXXXXXXXXXX      DD PV G    GA+S+KWRQQS  FR+A+R AR+V  AQ  G  LA LP    +APDPSL+PCPHC RRF+E A ERH+  C +I+A+PS L KGSG  LG A+RK
Sbjct:  234 VQLQQCPDCGRRFNEKAFGKHVSVCRQVFLQKRKAFDAAKMRVAGTEMAEFTAKTPSGRGSAXXXXXXXXXXXXXXXXXTGDDQPVAGNG--GAKSAKWRQQSAAFREAIRSARMVTQAQAKGIPLARLPAAAAAAPDPSLVPCPHCARRFNEAAAERHIPRCSSIRAQPSRLAKGSGRGLGVASRK 418          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A7S4DGN0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGN0_HETAK)

HSP 1 Score: 137 bits (346), Expect = 8.530e-34
Identity = 90/179 (50.28%), Postives = 114/179 (63.69%), Query Frame = 0
Query:  353 CGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTE----LEKFAKEKGRAGGXXXXXXXXXXXGPPGGYDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSGSLLGQAARK 527
            CGR+F   AL KH + C KVF  KR+ FDT + R+ G E    L K  +E+     XXXXXXXXXXX      +D PVG   A     SKW+ QS Q R+A++Q R++A  +K GKSLADLP   PSAPDPSL+PCP CGRRF++ A +RH+  C  I+ KP  L++G+   LG AARK
Sbjct:   38 CGRKFNEKALAKHEKVCRKVFVEKRRAFDTQQQRITGEEHAKALAKTKQEEAARXXXXXXXXXXXXXXXXANPEDQPVGNGKA-----SKWKAQSDQLREAMKQQRLIARYEKEGKSLADLPQMAPSAPDPSLVPCPTCGRRFNQQAADRHIPKCATIRNKPKTLQRGARVGLGAAARK 211          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A5A8D635_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D635_CAFRO)

HSP 1 Score: 137 bits (346), Expect = 6.820e-31
Identity = 96/190 (50.53%), Postives = 118/190 (62.11%), Query Frame = 0
Query:  342 DEQVELEQCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGXXXXXXXXXXX------------GPPGGYDDTPVGGA-AARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSG 518
            D+ V +E C TCGR+F P ALEKH+R C KVFQ KR+ FD+   R+    L       G  GGXXXXXXXXXXX            GPP G   +  GGA AA  A+   WRQ+S Q R+A++ +R++  AQK GK L DLPP   +APDPSL+PCPHCGR F+ +A ERH+  C   KAKPS L +G G
Sbjct:  469 DDGVRVE-CSTCGRKFRPDALEKHARVCLKVFQKKRRKFDSTSARMPPEALA-----VGADGGXXXXXXXXXXXXGAPARGPRSRGGPPAG---SAAGGADAAARAKREAWRQKSSQLREAMKASRMITKAQKEGKDLRDLPPMPAAAPDPSLVPCPHCGRTFNAVAAERHIPKCATTKAKPSRLARGGG 649          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A5A8DGU2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DGU2_CAFRO)

HSP 1 Score: 137 bits (345), Expect = 1.260e-30
Identity = 82/190 (43.16%), Postives = 105/190 (55.26%), Query Frame = 0
Query:  330 GYVDDLPPDAFPDEQVELEQCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGXXXXXXXXXXXGPPGGYDDTPVGGA-AARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSG 518
            G + + P     D+ V +E C TCGR+F P ALEKH+R C KVFQ KR+ FD+                                 GPP G   +  GGA AA  A+   WRQ+S Q R+A++ +R++  AQK GK L DLPP   +APDPSL+PCPHCGR F+ +A ERH+  C   KAKPS L +G G
Sbjct:  568 GAMSEYPEPDEEDDGVRVE-CSTCGRKFRPDALEKHARVCLKVFQKKRRKFDSTR------------------------------GGPPAG---SAAGGADAAARAKREAWRQKSSQLREAMKASRMITKAQKEGKDLRDLPPMPAAAPDPSLVPCPHCGRTFNAVAAERHIPKCATTKAKPSRLARGGG 723          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A5D6XYR0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XYR0_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.180e-29
Identity = 86/187 (45.99%), Postives = 114/187 (60.96%), Query Frame = 0
Query:  330 GYVDDLPPDAFPDEQVELEQCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGXXXXXXXXXXXGPPGGYDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKG 516
            G+     PD FPDE  E+ +C  C RRF   +L KH + C KVF  +RKVF+ A  RL+GTE EK AK+ G++G XXXXXXXXXXX      ++ P+        +   W+ +S  FRDA++ +R V  A K G+   +LPP KPSAPDPSLI C +C RRF++ A ERH+  C+  K +   LK G
Sbjct:   10 GFGSSEQPDEFPDESEEMAECDNCHRRFNVNSLVKHRKVCEKVFTGQRKVFNMAAKRLEGTEAEKVAKKTGKSGXXXXXXXXXXXX-----AEEQPL--------KKPDWKSKSSAFRDAMKASRDVTIALKEGR---ELPPMKPSAPDPSLIQCEYCSRRFNDKAAERHITFCRE-KTQRDSLKSG 179          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A7R9VCN1_9CHLO (Hypothetical protein n=2 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VCN1_9CHLO)

HSP 1 Score: 128 bits (321), Expect = 1.600e-27
Identity = 72/177 (40.68%), Postives = 101/177 (57.06%), Query Frame = 0
Query:  342 DEQVELEQCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGXXXXXXXXXXXGPPGGYDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSG 518
            D  ++  +C +CGRRF P ALEKH+R C +VF  KR+ +D++  RL+GTE   +A    R GG             P  +  +  G + + G    KW+ QS+  +DA++  R +      G+ + ++P    SAPDPSL+ CPHCGRRF+E A ERHM HC N  AKP  LK G+G
Sbjct:  597 DSDMDRVECGSCGRRFLPEALEKHARVCSRVFANKRRPYDSSRHRLEGTEAAAYAGP--RRGGK------------PAAHGSSHGGKSGSGGGEVPKWKAQSQALQDAMKNMRELKSRLARGEDIRNIPVVA-SAPDPSLVQCPHCGRRFNERAAERHMSHCANTVAKPKFLKAGTG 758          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A8J4ER22_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4ER22_9CHLO)

HSP 1 Score: 123 bits (309), Expect = 5.770e-27
Identity = 90/197 (45.69%), Postives = 112/197 (56.85%), Query Frame = 0
Query:  334 DLPPDA--FPDEQVELE-QCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKF---------AKEKGRAGGXXXXXXXXXXXGPPGGYDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSG 518
            DLPPDA  + D+  E   QC TCGRRF P A +KH+R C KVF  KRKVF++A  R+ GT+   F         A   G    XXXXXXXX   G  GG  D   GG          W+ QS Q R A+R+ R V  A   G+ + ++P   PSAPDPSL+ CP+CGRRF+  A ERH+  C +I +KP  LK G+G
Sbjct:  219 DLPPDADGYGDDGGEARVQCGTCGRRFLPEAYDKHARVCAKVFAGKRKVFNSAAKRIGGTDAAGFYNPRAAQRPAPPAGXXXXXXXXXXXXSAMGRGGGPGDFRGGGG------KPAWKAQSDQLRQAMREMRKVGAALARGEDIRNIPH-VPSAPDPSLVQCPNCGRRFNAQAAERHIPRCASIVSKPKFLKAGTG 408          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A812UVN6_SYMMI (ZC2HC1A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UVN6_SYMMI)

HSP 1 Score: 118 bits (295), Expect = 7.450e-27
Identity = 86/187 (45.99%), Postives = 112/187 (59.89%), Query Frame = 0
Query:  343 EQVELEQCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGT-ELEKFAKEKGRA----GGXXXXXXXXXXXGPPGGYDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSVLKKGSGSLLGQA 524
            EQ+E   C  CGR+F P   EKH + C KVF  K K FD+ +MR+    EL K  +   R+      XXXXXXXXXXX                      KW++QS QFR+A+R AR+VA A+K+G  + ++    PSAPDPSL+PCP+CGR F+E A ERH+  CKNI+A+P  LK+GSG   G+A
Sbjct:   17 EQLE---CPDCGRKFNPIPYEKHVKICAKVFLQKSKAFDSKKMRIADNPELLKIQQAALRSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGKWKEQSNQFREAMRMARMVAKAEKTGGPMPEM---APSAPDPSLVPCPNCGRTFNERAAERHIPQCKNIRAQPKSLKRGSGGAGGRA 197          
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Match: A0A8J5J921_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J921_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.060e-26
Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = 0
Query:  338 DAFPDEQVELEQCRTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKGRAGGXXXXXXXXXXXGP----PGGYDDTPVGGAAARGARSSKWRQQSKQFRDALRQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHMQHCKNIKAKPSV 512
            D + D   ++EQC  C R+F  A+ +KH + C KVF  +RKVF+ A  RL+GTE EK AKE                 GP    P    + P+   +A     + W+Q+S+ FR+A++ +R V+ A K GK   +LPP  PSAPDPSLI C +C RRF+E A ERH+  C+    + ++
Sbjct:   23 DEYGDGAEQMEQCHNCSRKFNAASFQKHQKICEKVFSGQRKVFNMAAKRLEGTEAEKLAKEA-----------KTNNKGPTRKTPLSATEQPIKVKSA-----ADWKQKSEMFRNAMKASRDVSKALKEGK---ELPPVMPSAPDPSLIQCEYCSRRFNEKAAERHINFCREKSQRDNI 182          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig594.16490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNR2_ECTSI5.210e-27290.71Zinc finger, C2H2 type family protein n=2 Tax=Ecto... [more]
A0A835Z9Y9_9STRA1.280e-3854.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DGN0_HETAK8.530e-3450.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5A8D635_CAFRO6.820e-3150.53Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8DGU2_CAFRO1.260e-3043.16Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A5D6XYR0_9STRA1.180e-2945.99Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7R9VCN1_9CHLO1.600e-2740.68Hypothetical protein n=2 Tax=Chlamydomonas euryale... [more]
A0A8J4ER22_9CHLO5.770e-2745.69Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A812UVN6_SYMMI7.450e-2745.99ZC2HC1A protein n=1 Tax=Symbiodinium microadriatic... [more]
A0A8J5J921_9STRA1.060e-2639.11Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13913zf-C2HC_2coord: 346..369
e-value: 2.0E-6
score: 27.6
coord: 481..504
e-value: 0.001
score: 18.9
NoneNo IPR availablePANTHERPTHR13555:SF5ZINC FINGER C2HC DOMAIN-CONTAINING PROTEIN T03G11.3coord: 168..519
IPR026319Zinc finger C2HC domain-containing proteinPANTHERPTHR13555C2H2 ZINC FINGER CGI-62-RELATEDcoord: 168..519

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig594contigEcto-sp13_S_contig594:18649..23576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig594.16490.1mRNA_Ecto-sp13_S_contig594.16490.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig594 18058..23579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig594.16490.1 ID=prot_Ecto-sp13_S_contig594.16490.1|Name=mRNA_Ecto-sp13_S_contig594.16490.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=542bp
MMPSPSTGNVTAAYRGGDDRFGGDDEGVNPTVERGVPAEKEQLRRNLSLL
KKKMHGQAGSRRSQSAGPRAGELFGDPNAAPSGPGGPDSHVEGGGRQHLH
MTTGTAPAMMPADPGAFLRDRDAAGRALGRRGVGGGARRRPPTDGLGSPY
AIDPNPRGGGAAAAAAAARTSARQRQHRQPPLEQQNRQHAHHQQQQVHQA
CINPAGGRRHGPFEGKHDSRRAGFNSTRTAAPADVAKSRPHDESGAGDVG
GGGTGYTRRGTHAAAPARAGGGRACVGGAPGGQGSPDRRRAWEGDNGGGG
GGSQGDGSRNRGGGGSRGKGGGGRGRGDDGYVDDLPPDAFPDEQVELEQC
RTCGRRFTPAALEKHSRACHKVFQAKRKVFDTAEMRLKGTELEKFAKEKG
RAGGRGGRRRGRGGRGPPGGYDDTPVGGAAARGARSSKWRQQSKQFRDAL
RQARVVADAQKSGKSLADLPPPKPSAPDPSLIPCPHCGRRFSELAGERHM
QHCKNIKAKPSVLKKGSGSLLGQAARKTASGASGKGRGQRW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026319ZC2HC1