prot_Ecto-sp13_S_contig58927.16410.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: D7FWF1_ECTSI (tRNA pseudouridine synthase B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF1_ECTSI) HSP 1 Score: 135 bits (340), Expect = 3.400e-39 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
Query: 6 CVRGQVEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
C+RGQVEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ
Sbjct: 25 CIRGQVEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 91
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: A0A6H5KMC7_9PHAE (tRNA pseudouridine(55) synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMC7_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.390e-34 Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0
Query: 11 VEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
VEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ
Sbjct: 108 VEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 169
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: A0A8J2SXF4_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SXF4_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 7.900e-13 Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 0
Query: 10 QVEREARQVRVDSLRQADPA--------LPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
+VEREARQV V LR D L LP GL++EC GG Y+RTLI+DL R G+ HM LERT+Q
Sbjct: 185 EVEREARQVSVSRLRMVDDRGVGSHEAPLSLPFFGLDVECSGGTYIRTLIDDLAREAGSCGHMVELERTRQ 255
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: A0A835Z9D0_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9D0_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 3.570e-12 Identity = 33/62 (53.23%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 11 VEREARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
VER+AR V + L + LP L ++C GG Y+RTLI D+ RALGTR HMT+L RTKQ
Sbjct: 176 VERDARPVTIYQLEAPAEGVALPSFALNVQCSGGTYIRTLIADIARALGTRGHMTSLVRTKQ 237
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: A0A7S3PWL8_9STRA (tRNA pseudouridine(55) synthase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWL8_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 5.070e-10 Identity = 33/65 (50.77%), Postives = 43/65 (66.15%), Query Frame = 0
Query: 11 VEREARQVRVDSLRQA---DPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
+E E R+V + SL D LP GL++ECGGG Y+R+L+ D+G AL T A MT+LERTKQ
Sbjct: 259 IEIELREVSIHSLEYLSTDDNGKGLPCFGLDVECGGGTYIRSLVRDMGYALDTCATMTSLERTKQ 323
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: A0A4W3IJ22_CALMI (tRNA pseudouridine(55) synthase n=6 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3IJ22_CALMI) HSP 1 Score: 62.8 bits (151), Expect = 6.170e-10 Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query: 13 REARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
R AR V V SL D PL LE+ECGGGFYVR+L+ DLG+ L + AH+ LERTKQ
Sbjct: 119 RPARPVVVHSLSVQD--FSPPLFTLEIECGGGFYVRSLVSDLGKELSSCAHVKELERTKQ 176
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: A0A3Q2CP24_CYPVA (tRNA pseudouridine(55) synthase n=1 Tax=Cyprinodon variegatus TaxID=28743 RepID=A0A3Q2CP24_CYPVA) HSP 1 Score: 62.8 bits (151), Expect = 8.720e-10 Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 0
Query: 10 QVE-REARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
QVE + AR+V V SL+ D PL L++ECGGGFYVR+L++DLG+AL + AH+ L RTKQ
Sbjct: 166 QVEAKPARRVTVFSLKLQD--FQPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELIRTKQ 227
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: A0A7K5NX61_CHRMC (tRNA pseudouridine(55) synthase (Fragment) n=8 Tax=Neognathae TaxID=8825 RepID=A0A7K5NX61_CHRMC) HSP 1 Score: 60.8 bits (146), Expect = 1.410e-9 Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0
Query: 2 FATLCVRGQV--EREARQVRVDSL--RQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
+TL RG+ + AR+VRV SL +Q P PL L++ECGGGFYVR+L+ D+G+ L T A M L RTKQ
Sbjct: 65 LSTLMKRGEAVEAKPARRVRVYSLSLQQFQP----PLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKQ 135
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: A0A851DLT9_TODME (tRNA pseudouridine(55) synthase (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A851DLT9_TODME) HSP 1 Score: 60.1 bits (144), Expect = 1.790e-9 Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query: 2 FATLCVRGQV--EREARQVRVDSL--RQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
+TL RG+ + AR VRV SL +Q P PL L++ECGGGFYVR+L+ D+G+ L T A M L RTKQ
Sbjct: 38 LSTLMKRGEAVEAKPARPVRVYSLSLQQFQP----PLFTLDVECGGGFYVRSLVSDIGKELSTCAMMQELTRTKQ 108
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Match: UPI00198CCE54 (probable tRNA pseudouridine synthase 1 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI00198CCE54) HSP 1 Score: 61.6 bits (148), Expect = 2.080e-9 Identity = 33/60 (55.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query: 13 REARQVRVDSLRQADPALPLPLLGLELECGGGFYVRTLIEDLGRALGTRAHMTALERTKQ 72
+ AR V V SL D PL LE+ECGGGFYVR+L++DLG+AL + AH+ L RTKQ
Sbjct: 170 KPARPVTVYSLSLQD--FNPPLFTLEIECGGGFYVRSLVDDLGKALSSCAHVQELTRTKQ 227 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58927.16410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig58927.16410.1 ID=prot_Ecto-sp13_S_contig58927.16410.1|Name=mRNA_Ecto-sp13_S_contig58927.16410.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bpback to top |