prot_Ecto-sp13_S_contig5880.16391.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5880.16391.1
Unique Nameprot_Ecto-sp13_S_contig5880.16391.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length60
Homology
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Match: D7G0R9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R9_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 3.140e-16
Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 0
Query:    1 REHGHALYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVF 41
            REHGHALYPPRE PL+DIVTN SSLTGSN WLLS +MLLVF
Sbjct:    8 REHGHALYPPREKPLKDIVTNYSSLTGSNKWLLSPIMLLVF 48          
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Match: D7G6T4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T4_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 8.610e-9
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 REHGHALYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVF 41
            RE G ++YP  E PL+DIVT+ +SLTGSN WLL+S+MLLVF
Sbjct:  700 REGGSSIYPVGEAPLKDIVTDYASLTGSNKWLLASIMLLVF 740          
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Match: D7FXD1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD1_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 1.980e-6
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    7 LYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVF 41
            LYPP    L+DIVTN SSLTGS+ W L SM+LLVF
Sbjct:  123 LYPPGTEHLKDIVTNYSSLTGSDKWTLQSMLLLVF 157          
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Match: D7G6M3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6M3_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 7.900e-6
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    4 GHALYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVF 41
            G+ LYPP   PL+D V + SSLTGS+ WLL+S++LLVF
Sbjct:  190 GNNLYPPGAEPLKDPVADYSSLTGSDKWLLASIVLLVF 227          
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Match: A0A6H5KXT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT2_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 1.010e-5
Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    7 LYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVF 41
            LYPP    L+DIVTN +SLTGS+ W L S+MLLVF
Sbjct:  122 LYPPGTEKLKDIVTNYTSLTGSDKWTLQSIMLLVF 156          
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Match: A0A6H5KIQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ6_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 4.220e-5
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    7 LYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVF 41
            LYP     L+DIVTN SSLTGS+ W L S+MLLVF
Sbjct:  113 LYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVF 147          
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Match: A0A6H5K3Q6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q6_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 7.550e-5
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    7 LYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVF 41
            LYP     L+DIVTN SSLTGS+ W L S+MLLVF
Sbjct:  516 LYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVF 550          
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 7.630e-5
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0
Query:    7 LYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVF 41
            LYP     L+DIVTN SSLTGS+ W L S+MLLVF
Sbjct:  565 LYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVF 599          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5880.16391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G0R9_ECTSI3.140e-1685.37Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G6T4_ECTSI8.610e-965.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXD1_ECTSI1.980e-668.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G6M3_ECTSI7.900e-660.53Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KXT2_9PHAE1.010e-565.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIQ6_9PHAE4.220e-565.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Q6_9PHAE7.550e-565.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9E1_9PHAE7.630e-565.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5880contigEcto-sp13_S_contig5880:1777..2159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5880.16391.1mRNA_Ecto-sp13_S_contig5880.16391.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5880 1777..2672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5880.16391.1 ID=prot_Ecto-sp13_S_contig5880.16391.1|Name=mRNA_Ecto-sp13_S_contig5880.16391.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=60bp
REHGHALYPPRETPLEDIVTNNSSLTGSNNWLLSSMMLLVFETCSIARGP
KMNTLNSTQ*
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