prot_Ecto-sp13_S_contig5879.16388.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5879.16388.1
Unique Nameprot_Ecto-sp13_S_contig5879.16388.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length54
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5879.16388.1 vs. uniprot
Match: D7FKP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKP2_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 1.160e-6
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:    1 MLPTSAPPXXXXL------PFNARCQEATPSLSNQLVVLEDPTGQARARSTR 46
            MLP+SAP XXXX       PFN  CQEATPS SNQLVVLEDPTG    R+++
Sbjct:    1 MLPSSAPXXXXXXXXXXXTPFNDWCQEATPSSSNQLVVLEDPTGGNIQRASK 52
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5879.16388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKP2_ECTSI1.160e-663.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5879contigEcto-sp13_S_contig5879:8236..8397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5879.16388.1mRNA_Ecto-sp13_S_contig5879.16388.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5879 8236..8444 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5879.16388.1 ID=prot_Ecto-sp13_S_contig5879.16388.1|Name=mRNA_Ecto-sp13_S_contig5879.16388.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=54bp
MLPTSAPPPPPPLPFNARCQEATPSLSNQLVVLEDPTGQARARSTRYTSN
GAV*
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