prot_Ecto-sp13_S_contig5878.16385.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5878.16385.1
Unique Nameprot_Ecto-sp13_S_contig5878.16385.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5878.16385.1 vs. uniprot
Match: D7FXP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP0_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.020e-45
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 0 
Query:    1 MVVIVETGDGGWDTQEESRDMLVGRIFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFQDLGDMNTWETPTVSQREG 79
            MVVIVETGDGGWDTQEE RDMLVGR+FGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSF DLG+ N WETP V QREG
Sbjct:    1 MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFPDLGNTNKWETPRVPQREG 79
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BLAST of mRNA_Ecto-sp13_S_contig5878.16385.1 vs. uniprot
Match: A0A6H5KH43_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH43_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 2.470e-25
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = 0 
Query:   22 LVGRIFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFQDLGDMNTWETP 72
            LVGR+FGGLPNGRLGRHSVKAARSPVDPGTEP+TPCSSFQDLG+MNTWETP
Sbjct:   12 LVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPATPCSSFQDLGNMNTWETP 62
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5878.16385.1 vs. uniprot
Match: D7G3B3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B3_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.750e-15
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 0 
Query:    1 MVVIVETGDGGWDTQEES--RDMLVGRIFGGLPNGRLGRHSVKAARSP------VDPGTEPSTPCSSFQDLGDMNTW 69
            MV++ ++GD  WDT+ ++  RDML GR+FGGLPNGRLGR S+KA  S       VDP TEPSTP SS  DL   NT+
Sbjct:    1 MVIVEDSGD--WDTERKTDPRDMLFGRVFGGLPNGRLGRRSIKAGGSAGNSVLRVDPVTEPSTPSSSSADLTSFNTF 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5878.16385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FXP0_ECTSI1.020e-4589.87Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KH43_9PHAE2.470e-2594.12Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7G3B3_ECTSI1.750e-1555.84Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5878contigEcto-sp13_S_contig5878:976..2626 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5878.16385.1mRNA_Ecto-sp13_S_contig5878.16385.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5878 976..2626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5878.16385.1 ID=prot_Ecto-sp13_S_contig5878.16385.1|Name=mRNA_Ecto-sp13_S_contig5878.16385.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
MVVIVETGDGGWDTQEESRDMLVGRIFGGLPNGRLGRHSVKAARSPVDPG
TEPSTPCSSFQDLGDMNTWETPTVSQREG
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