prot_Ecto-sp13_S_contig58743.16380.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig58743.16380.1
Unique Nameprot_Ecto-sp13_S_contig58743.16380.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig58743.16380.1 vs. uniprot
Match: D8LR28_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR28_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 3.910e-22
Identity = 49/50 (98.00%), Postives = 49/50 (98.00%), Query Frame = 0
Query:    1 MLEPSEVVRDEEGNLFATLPAADSRTAHVRGVLKVENGESVRVGVVNAGR 50
            MLEPSEVVRDEEGNL ATLPAADSRTAHVRGVLKVENGESVRVGVVNAGR
Sbjct:   89 MLEPSEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGESVRVGVVNAGR 138          
BLAST of mRNA_Ecto-sp13_S_contig58743.16380.1 vs. uniprot
Match: A0A6H5KW92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW92_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 3.120e-21
Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    1 MLEPSEVVRDEEGNLFATLPAADSRTAHVRGVLKVENGESVRVGVVNAGR 50
            MLEP+EVVRDEEGNL ATLPAADSRTAHVRGVLKVENGE VRVGVVNAGR
Sbjct:    1 MLEPAEVVRDEEGNLSATLPAADSRTAHVRGVLKVENGEPVRVGVVNAGR 50          
BLAST of mRNA_Ecto-sp13_S_contig58743.16380.1 vs. uniprot
Match: A0A7S4NPP0_GUITH (16S rRNA (uracil(1498)-N(3))-methyltransferase n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NPP0_GUITH)

HSP 1 Score: 50.8 bits (120), Expect = 5.640e-6
Identity = 21/50 (42.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 MLEPSEVVRDEEGNLFATLPAADSRTAHVRGVLKVENGESVRVGVVNAGR 50
            + EP EVV   + +    L  +D R  H++ +LK+ENG+S+R+GVV+AG+
Sbjct:   85 LFEPEEVVPSSQSSCLLYLAKSDKRVTHIKKILKLENGQSLRIGVVDAGK 134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58743.16380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LR28_ECTSI3.910e-2298.0016S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A6H5KW92_9PHAE3.120e-2194.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4NPP0_GUITH5.640e-642.0016S rRNA (uracil(1498)-N(3))-methyltransferase n=3... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58743contigEcto-sp13_S_contig58743:322..474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58743.16380.1mRNA_Ecto-sp13_S_contig58743.16380.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig58743 42..474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig58743.16380.1 ID=prot_Ecto-sp13_S_contig58743.16380.1|Name=mRNA_Ecto-sp13_S_contig58743.16380.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
MLEPSEVVRDEEGNLFATLPAADSRTAHVRGVLKVENGESVRVGVVNAGR
*
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