prot_Ecto-sp13_S_contig58588.16348.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig58588.16348.1
Unique Nameprot_Ecto-sp13_S_contig58588.16348.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: A0A7S2XCJ6_9EUKA (GPN-loop GTPase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XCJ6_9EUKA)

HSP 1 Score: 69.7 bits (169), Expect = 1.550e-12
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0
Query:   20 YVFIDTPGQIEVFTWSASGQIITETLASAFPTV 52
            YVFIDTPGQIEVFTWSASGQIIT+TLASAFPTV
Sbjct:  209 YVFIDTPGQIEVFTWSASGQIITDTLASAFPTV 241          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: D8LKI4_ECTSI (GPN-loop GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI4_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.150e-12
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
Query:   20 YVFIDTPGQIEVFTWSASGQIITETLASAFPT 51
            YVFIDTPGQIEVFTWSASGQIITETLASAFPT
Sbjct:  151 YVFIDTPGQIEVFTWSASGQIITETLASAFPT 182          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: A0A835YZW9_9STRA (GPN-loop GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW9_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.510e-12
Identity = 33/42 (78.57%), Postives = 35/42 (83.33%), Query Frame = 0
Query:   10 ARHDPRGPRRYVFIDTPGQIEVFTWSASGQIITETLASAFPT 51
            AR D      YVF+DTPGQIEVFTWSASGQIITE+LASAFPT
Sbjct:  133 ARSDSAEGLDYVFVDTPGQIEVFTWSASGQIITESLASAFPT 174          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: A0A167Z6G4_9EURO (GPN-loop GTPase 1 n=1 Tax=Ascosphaera apis ARSEF 7405 TaxID=392613 RepID=A0A167Z6G4_9EURO)

HSP 1 Score: 68.6 bits (166), Expect = 4.110e-12
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 LLPHDPPSNARHDPRGPRRYVFIDTPGQIEVFTWSASGQIITETLASAFPTV 52
            LLPH+P +   +    P +++ +DTPGQIEVF WSASG I+ ETLAS FPTV
Sbjct:  157 LLPHNPTTGQPNPGARPSKHILVDTPGQIEVFVWSASGSILLETLASTFPTV 208          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: A0A7S0I0E1_9EUKA (GPN-loop GTPase (Fragment) n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I0E1_9EUKA)

HSP 1 Score: 66.2 bits (160), Expect = 5.060e-12
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0
Query:   14 PRGPRRYVFIDTPGQIEVFTWSASGQIITETLASAFPT 51
            P  P RYV +DTPGQIE+FTWSASGQIITE+LASA PT
Sbjct:  131 PCDPLRYVLLDTPGQIEIFTWSASGQIITESLASAMPT 168          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: UPI000719B7D1 (GPN-loop GTPase 1-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719B7D1)

HSP 1 Score: 67.4 bits (163), Expect = 8.860e-12
Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 0
Query:   16 GPRRYVFIDTPGQIEVFTWSASGQIITETLASAFPTV 52
            G  +Y+ +DTPGQIEVFTWSASGQIITETLASAFPTV
Sbjct:   88 GECKYMIMDTPGQIEVFTWSASGQIITETLASAFPTV 124          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: A0A7S2N6V9_9EUKA (GPN-loop GTPase (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2N6V9_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 9.080e-12
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0
Query:    9 NARHDPRGPRRYVFIDTPGQIEVFTWSASGQIITETLASAFPTV 52
            N R D   P +Y   DTPGQIE+FTWSASGQIITE+LA+++PTV
Sbjct:   52 NKRVDSGKPPQYALFDTPGQIEIFTWSASGQIITESLAASYPTV 95          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: A0A6I9NPQ4_9TELE (GPN-loop GTPase n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NPQ4_9TELE)

HSP 1 Score: 64.7 bits (156), Expect = 1.090e-11
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0
Query:   19 RYVFIDTPGQIEVFTWSASGQIITETLASAFPTV 52
            RYV IDTPGQIEVFTWSASG IITETLAS+FP V
Sbjct:   19 RYVLIDTPGQIEVFTWSASGTIITETLASSFPCV 52          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: A0A6J2PDK3_COTGO (GPN-loop GTPase n=1 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2PDK3_COTGO)

HSP 1 Score: 64.7 bits (156), Expect = 2.550e-11
Identity = 30/34 (88.24%), Postives = 31/34 (91.18%), Query Frame = 0
Query:   19 RYVFIDTPGQIEVFTWSASGQIITETLASAFPTV 52
            RYV IDTPGQIEVFTWSASG IITETLAS+FP V
Sbjct:  137 RYVLIDTPGQIEVFTWSASGTIITETLASSFPCV 170          
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Match: UPI00071C4A43 (GPN-loop GTPase 1-like n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=UPI00071C4A43)

HSP 1 Score: 62.8 bits (151), Expect = 3.320e-11
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0
Query:   20 YVFIDTPGQIEVFTWSASGQIITETLASAFPTV 52
            YV +DTPGQIEVFTWSASG IITE LAS+FPTV
Sbjct:    1 YVILDTPGQIEVFTWSASGSIITEALASSFPTV 33          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig58588.16348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XCJ6_9EUKA1.550e-1296.97GPN-loop GTPase n=1 Tax=Lotharella oceanica TaxID=... [more]
D8LKI4_ECTSI2.150e-12100.00GPN-loop GTPase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835YZW9_9STRA3.510e-1278.57GPN-loop GTPase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A167Z6G4_9EURO4.110e-1257.69GPN-loop GTPase 1 n=1 Tax=Ascosphaera apis ARSEF 7... [more]
A0A7S0I0E1_9EUKA5.060e-1278.95GPN-loop GTPase (Fragment) n=2 Tax=Phaeocystis ant... [more]
UPI000719B7D18.860e-1283.78GPN-loop GTPase 1-like n=1 Tax=Priapulus caudatus ... [more]
A0A7S2N6V9_9EUKA9.080e-1265.91GPN-loop GTPase (Fragment) n=1 Tax=Haptolina brevi... [more]
A0A6I9NPQ4_9TELE1.090e-1188.24GPN-loop GTPase n=1 Tax=Notothenia coriiceps TaxID... [more]
A0A6J2PDK3_COTGO2.550e-1188.24GPN-loop GTPase n=1 Tax=Cottoperca gobio TaxID=567... [more]
UPI00071C4A433.320e-1184.85GPN-loop GTPase 1-like n=1 Tax=Octopus bimaculoide... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 9..54
e-value: 1.0E-10
score: 43.4
IPR004130GPN-loop GTPasePFAMPF03029ATP_bind_1coord: 18..52
e-value: 3.6E-9
score: 36.8
IPR004130GPN-loop GTPasePANTHERPTHR21231XPA-BINDING PROTEIN 1-RELATEDcoord: 18..52
IPR030230GPN-loop GTPase 1PANTHERPTHR21231:SF8GPN-LOOP GTPASE 1coord: 18..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig58588contigEcto-sp13_S_contig58588:387..557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig58588.16348.1mRNA_Ecto-sp13_S_contig58588.16348.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig58588 387..557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig58588.16348.1 ID=prot_Ecto-sp13_S_contig58588.16348.1|Name=mRNA_Ecto-sp13_S_contig58588.16348.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
LLPHDPPSNARHDPRGPRRYVFIDTPGQIEVFTWSASGQIITETLASAFP
TVSGGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004130Gpn
IPR030230Gpn1/Npa3/XAB1