prot_Ecto-sp13_S_contig5852.16335.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5852.16335.1
Unique Nameprot_Ecto-sp13_S_contig5852.16335.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length268
Homology
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: D8LPG5_ECTSI (EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI)

HSP 1 Score: 523 bits (1347), Expect = 1.920e-187
Identity = 247/267 (92.51%), Postives = 256/267 (95.88%), Query Frame = 0
Query:    1 MFITESESTWMGLEGIGKGKRNKTFVSRDFKTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNNYKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFFKETFL 267
            MFIT+ ESTWMG EGIGKG+RNKTFVSRDFKTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSIL+ARSSAWCR+KFC R EGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGR DT++ITSSQPFFDRTLGANGTF+GASD SR   QQ PRR+NYKKCLLAGSTVYFDR+FLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDI DSISLMKFFKETFL
Sbjct:    1 MFITQRESTWMGSEGIGKGRRNKTFVSRDFKTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILLARSSAWCRRKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTTQITSSQPFFDRTLGANGTFLGASDASRCRHQQQPRRSNYKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKETFL 267          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: A0A482V8A7_9CUCU (Oligoribonuclease n=1 Tax=Asbolus verrucosus TaxID=1661398 RepID=A0A482V8A7_9CUCU)

HSP 1 Score: 127 bits (319), Expect = 3.970e-32
Identity = 78/223 (34.98%), Postives = 114/223 (51.12%), Query Frame = 0
Query:   45 WIDMETTGLDTDTNLILEIVMVVTDRDLNEI-DSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNNYKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFFKETF 266
            W+DME TGLD  T+ I+E+  +VTD +LN I +   +V+HHP ++L    S WC+K+  +      GL EAC  S ++ +EAE ++  F   Y         T  ++                                        LAG++VY DRLFL KY P L  + HYR++DVST  E+ RRW P++   +P++  SHRA  DIR+SI  +K++K TF
Sbjct:   61 WVDMEMTGLDIQTDKIMEVACIVTDSNLNIIAEGPNIVIHHPRNVL-DNMSEWCKKQHAK-----TGLTEACLNSNVTLNEAENKLMAFVTKYV--------TENVSP---------------------------------------LAGNSVYMDRLFLRKYMPRLDEYLHYRIIDVSTIKELCRRWNPNLYRDIPKKEFSHRALADIRESIDELKYYKNTF 230          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: A0A835Z4U2_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U2_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.260e-30
Identity = 70/226 (30.97%), Postives = 124/226 (54.87%), Query Frame = 0
Query:   43 WFWIDMETTGLDTDTNL--ILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRN----NYKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFF 262
            W ++D+E T LD   +   ILEI   + D  +  ID+  ++++ P  I+ A +S WC+K+FC R EGGN LF  C  S ++  +A + +  F   ++K+   + D +     + FF             ++TS    ++   +     ++ + +LAG +VYFDR  LL  +P L+    ++ +++S+ LE+ R+WRPD+ A LP    +HRA  D+ +S+SL+++F
Sbjct:    9 WLFLDIECTQLDYQAHNFGILEIAAAIVDNSMEVIDTFHVIVNQPAHIIAA-ASKWCKKRFCSRLEGGNDLFAQCDASIITEAQAGFMLEQFIMKHAKERHMQPDEAE--QKRRFFQAAELETIDAAIETETSEAFIEKDVEKTQGGISHFRVMLAGCSVYFDRAVLLHIYPRLRNLIGHKTIELSSLLEIARKWRPDILATLPPAQDAHRALIDVLESVSLLRWF 231          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: A0A836CDV0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV0_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.140e-28
Identity = 79/240 (32.92%), Postives = 119/240 (49.58%), Query Frame = 0
Query:   43 WFWIDMETTGLD-TDTNL-ILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSR-----ITSSQPFFDRTLG-------ANGTFIGASDTSRY-----HQQQHPRRNNYK--KCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKF 261
            W W D+E TGLD T     +LEI   VT  DL   D+  +++H P  +L A +S+WC + F  R  GGN LF+ C  S +S  EA   +  F   ++K    R   +      +     F     G       A    I A DT R+     + +  PR   +   + + AG + YFDR  +L  FP L+ +  ++ +DV++ LE+ RRWRPD+   LP   G+HRA  D+ +SI L+++
Sbjct:   22 WIWCDIECTGLDPTSPGFGVLEIAAAVTGDDLTVQDTFHVIIHQPDRVL-AGASSWCAEHFGPRYAGGNDLFQQCRASVISEAEAGELLEAFIVKHAKPRKARAAAAAEVPEAVVKRNVFKTAEFGDVIEDGDAMAGDIEAQDTRRHRAGPAYGRPRPRAQQHDVYRVMFAGCSCYFDRGVILNRFPNLRKYIAHKTIDVTSVLEITRRWRPDLLRSLPAPQGTHRALPDVLESICLLRW 260          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: UPI00035A2ADF (probable oligoribonuclease isoform X1 n=3 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A2ADF)

HSP 1 Score: 114 bits (286), Expect = 9.480e-27
Identity = 79/239 (33.05%), Postives = 117/239 (48.95%), Query Frame = 0
Query:   26 VSRDFKTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEI-DSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNNYKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFFK 263
            +S+DFK S    +      WID+E TGLD D++ ILEI  +VT+ DL  + +   L++H  + +L      WC ++      G +GL E+   S +S H+AE ++  F                                             +QH        C +AG++V  D+ FL +Y P L + FHYR+VDVST  E+ RRW P++  +LP +N SHRA DDIR+SI  +KF+K
Sbjct:  101 MSKDFKES----QGSSRIIWIDLEMTGLDVDSDTILEIACIVTEGDLALVAEGPSLIIHQENEVL-ENMGEWCTEQ-----HGKSGLTESVRNSKISLHQAEEQVLEFV--------------------------------------------KQHTPSG---VCPIAGNSVGKDKQFLERYMPRLASHFHYRIVDVSTIKELCRRWYPNLEKRLPSKNLSHRALDDIRESIEELKFYK 282          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: UPI0018E4FBAB (oligoribonuclease, mitochondrial n=1 Tax=Zerene cesonia TaxID=33412 RepID=UPI0018E4FBAB)

HSP 1 Score: 111 bits (278), Expect = 2.820e-26
Identity = 71/221 (32.13%), Postives = 108/221 (48.87%), Query Frame = 0
Query:   45 WIDMETTGLDTDTNLILEIVMVVTDRDLNEIDS-MRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNNYKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFFKE 264
            W+D+E TGL  +T+ ILEI  +V+D DLN + +   +V+H P  IL      WC         G +GL +AC  S +S  EAE ++  F                                         R H  +       KKC L G++VY DRLFL KY P L  + HYR++DVS+  E+++RW P   + +P +  +HR+ DDI +S++ +K++K+
Sbjct:   44 WVDLEMTGLQVETDHILEIACLVSDADLNVVATGPNIVIHQPDEILN-NMGEWCTAH-----HGESGLTKACRESTISVCEAENQILKFL----------------------------------------RSHVPE-------KKCPLGGNSVYMDRLFLRKYMPRLNDYLHYRIIDVSSFKEIIKRWFPKEYSNIPEKKFAHRSMDDILESLAELKYYKD 211          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: A0A2T6EB83_9GAMM (Oligoribonuclease n=1 Tax=Saccharospirillum sp. MSK14-1 TaxID=1897632 RepID=A0A2T6EB83_9GAMM)

HSP 1 Score: 110 bits (275), Expect = 3.110e-26
Identity = 74/223 (33.18%), Postives = 108/223 (48.43%), Query Frame = 0
Query:   45 WIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNNYKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFFKETFL 267
            W+D+E TGLD DT+ ILEI  VVTD+DLN +     ++ H    L+     WC         G +GL +    S+LS  E E +  +F   + +                             GAS                    L G++++ DR FL++Y P L ++ HYR +DVST  E+ RRWRP+V   + ++ GSHRA DDI DSI+ ++ ++ETFL
Sbjct:    9 WVDLEMTGLDPDTDRILEIATVVTDKDLNVLAEGPTLVVHQSDALLDGMDEWCTTH-----HGQSGLTQRVKDSSLSEAEVEQQTLDFLSDWVEP----------------------------GASP-------------------LCGNSIWQDRRFLIRYMPKLDSYCHYRNIDVSTLKELARRWRPEVLGGVHKK-GSHRALDDILDSINELRHYRETFL 178          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: A0A835ZEI1_9STRA (Ribonuclease H-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI1_9STRA)

HSP 1 Score: 111 bits (278), Expect = 7.180e-26
Identity = 75/239 (31.38%), Postives = 124/239 (51.88%), Query Frame = 0
Query:   43 WFWIDMETTGLD-TDTNL-ILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKD----VGGRCDTS-----RITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNN---YKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFFKETFL 267
            W  +D+E T LD T  +  ILEI   V D  +  ID+  +++H  ++ ++  SS WC+++F  R EGGN LF  C  S ++   A   +  F   ++K      G   D       R    +P     L A+    G ++     +QQ    +    + + +LAG +VYFDR  LL  +P L+ +  ++ +++S+ LE+VRRWRPD+   LP     HRA  D+ +++SL+++F  +FL
Sbjct:   18 WMMLDIECTSLDYTSPDFGILEIAASVVDDAMEVIDTFHVIVHQ-NARIIGNSSRWCKQRFRSRLEGGNDLFAQCELSTITEEMAGAMLEAFILKHAKKRQPAAGSEHDAQKRNLFRAAEFEPI--DALVAHEVVDGPAEEVAPPKQQMKVESTGMEHYRIMLAGCSVYFDRAVLLHCYPRLRMYIGHKTIELSSLLEIVRRWRPDLLRSLPPTQECHRALVDVMEAVSLLRWFWRSFL 253          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: UPI00167AA9AB (oligoribonuclease n=1 Tax=Saccharospirillum salsuginis TaxID=418750 RepID=UPI00167AA9AB)

HSP 1 Score: 106 bits (265), Expect = 9.510e-25
Identity = 74/224 (33.04%), Postives = 111/224 (49.55%), Query Frame = 0
Query:   45 WIDMETTGLDTDTNLILEIVMVVTDRDLNEI-DSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNNYKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFFKETFL 267
            W+D+E TGL+ DT+ I+EI  +VTD+DLN I +   LV+H   + L A        ++C +  G +GL +    SALS  +AE +  +F   + +                             GAS                    L G++++ DR FL++Y P L  F HYR +DVST  E+ RRWRP+V   + ++ GSHRA DDI++SI  +K ++  FL
Sbjct:    9 WVDLEMTGLNPDTDRIIEIATLVTDKDLNIIAEGPNLVVHQSDATLDAMD------EWCTQHHGESGLTQKVKDSALSEAQAEQQTLDFLKEWVEP----------------------------GASP-------------------LCGNSIWQDRRFLIRYMPSLDEFCHYRNIDVSTLKELARRWRPEVLEGV-QKQGSHRALDDIKESIGELKHYRAEFL 178          
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Match: A0A7M7L1L4_APIME (probable oligoribonuclease n=6 Tax=Apis TaxID=7459 RepID=A0A7M7L1L4_APIME)

HSP 1 Score: 106 bits (264), Expect = 1.480e-24
Identity = 67/221 (30.32%), Postives = 107/221 (48.42%), Query Frame = 0
Query:   45 WIDMETTGLDTDTNLILEIVMVVTDRDLNEI-DSMRLVLHHPHSILMARSSAWCRKKFCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRITSSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNNYKKCLLAGSTVYFDRLFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDIRDSISLMKFFKE 264
            WID E TGL  +T+ ILEI  ++TD DLN + +   +V++ P  +++   + WC     +     +GL +   +S ++   AE  + NF   Y            I S                                   + C LAG+T+Y DRLFLLK+ P +  + HYR++DVST  E+VRRW  + +  +P++   HRA  DI++SI  +K++K+
Sbjct:   11 WIDTELTGLQIETDTILEIACLITDEDLNIVSEEFNIVINQP-DVVLEHMNEWCMNFHTK-----SGLVQESKYSKITLKVAEEMLLNFLKKY------------IPS-----------------------------------QTCPLAGNTIYMDRLFLLKHMPLVNDYLHYRIIDVSTIKELVRRWNSNQSESIPKKFLHHRALPDIKESIEELKYYKK 178          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5852.16335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPG5_ECTSI1.920e-18792.51EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI[more]
A0A482V8A7_9CUCU3.970e-3234.98Oligoribonuclease n=1 Tax=Asbolus verrucosus TaxID... [more]
A0A835Z4U2_9STRA5.260e-3030.97Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A836CDV0_9STRA1.140e-2832.92Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
UPI00035A2ADF9.480e-2733.05probable oligoribonuclease isoform X1 n=3 Tax=Aply... [more]
UPI0018E4FBAB2.820e-2632.13oligoribonuclease, mitochondrial n=1 Tax=Zerene ce... [more]
A0A2T6EB83_9GAMM3.110e-2633.18Oligoribonuclease n=1 Tax=Saccharospirillum sp. MS... [more]
A0A835ZEI1_9STRA7.180e-2631.38Ribonuclease H-like domain-containing protein n=2 ... [more]
UPI00167AA9AB9.510e-2533.04oligoribonuclease n=1 Tax=Saccharospirillum salsug... [more]
A0A7M7L1L4_APIME1.480e-2430.32probable oligoribonuclease n=6 Tax=Apis TaxID=7459... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 267..267
NoneNo IPR availablePANTHERPTHR11046:SF0OLIGORIBONUCLEASE, MITOCHONDRIALcoord: 41..265
NoneNo IPR availablePANTHERPTHR11046OLIGORIBONUCLEASE, MITOCHONDRIALcoord: 41..265
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 45..77
e-value: 1.9E-4
score: 22.0
coord: 186..258
e-value: 3.3E-5
score: 24.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 28..160
e-value: 4.6E-23
score: 83.6
coord: 173..267
e-value: 1.2E-24
score: 88.8
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 39..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5852contigEcto-sp13_S_contig5852:729..1532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5852.16335.1mRNA_Ecto-sp13_S_contig5852.16335.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5852 729..1532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5852.16335.1 ID=prot_Ecto-sp13_S_contig5852.16335.1|Name=mRNA_Ecto-sp13_S_contig5852.16335.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=268bp
MFITESESTWMGLEGIGKGKRNKTFVSRDFKTSKHDYENEFPWFWIDMET
TGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILMARSSAWCRKK
FCRRGEGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRCDTSRIT
SSQPFFDRTLGANGTFIGASDTSRYHQQQHPRRNNYKKCLLAGSTVYFDR
LFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYD
DIRDSISLMKFFKETFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf