prot_Ecto-sp13_S_contig5809.16265.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5809.16265.1
Unique Nameprot_Ecto-sp13_S_contig5809.16265.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length619
Homology
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: A0A6H5L840_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L840_9PHAE)

HSP 1 Score: 977 bits (2525), Expect = 0.000e+0
Identity = 542/618 (87.70%), Postives = 557/618 (90.13%), Query Frame = 0
Query:    1 MVLASQLSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGVLDLLFQGKPGAGNAITWIRSHHGGKDKGKDKDKDNKLKGNDGSLEDVSLVDWLCGLRDMSATGAYRASLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVDLGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRVAIPFINMVGGSNDGGDARGGGVDAVEGHVTCATAGRSCTVLGTRHGAVLFSGFITTTTGNRFCAAFSEFGRLGNGLRCWRVQCECLPVTDTTLVMAIDPAGQVYEVQPRNGVAFGGNRSSRYGNPSEQRVSLSADCAPCSSVILSPSDDERGRCWLETGGEVEESGWGMNVSCGMVGVSRDGRLLFDRDEDDVGKERCVGVFHASARIGDSSEVSHGLRLEDGGTSVLTWGDGRTGHLGHGAPAFEPKPKVVTTAVVLGSAASGVRSASVNVSVGDSLGXXXXXXXXXXXXXXXXXXAGFRGVLALVDAAADRRDAADGRAVATEXXXXXXXXXXXXXEAKRRKVSQTDGR 618
            M+L SQLSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGVLDLLFQG+PGAGNAI WIRSHHGGKDK       NKLKGN GS +DVSLVDWLCGLRDMSATGAYRASLGETHSLL+TPGGRALSAGSGRHGVLGAS RMNRFLFTEVDLGWGRFP RIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHG+EASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKA+TWGWGYLGILGRGSDADVLKPTRVAIP IN VGGS DGGDARGGGV AVEGHVTCATAGRSCTVLGTRHGAVLFSGFITT T NRFCA FSEFGRLG+GLRCWRVQCECLPVTDTT+V AIDPAGQVYEVQPRNGVA GGN SSRYGNPSEQRV LSA+ APCSSVILSP DDERG+CWLETGGEVEE GWGMN+S GMVGVSRDGRLLFD DEDD GKER  GV HASARIG S EVSHGLR+EDGGT VLTWGDGRTGH             VVTTAVVLGSAASGVRSASVNVSV DS G   XXXXXXXXXXXX     FRGVLALVDAAAD+RDAAD RA+A +XXXXXXXXXXXXXEAKRRKVSQTDGR
Sbjct:    1 MILPSQLSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGVLDLLFQGRPGAGNAIPWIRSHHGGKDKXXXXX--NKLKGNGGSHDDVSLVDWLCGLRDMSATGAYRASLGETHSLLVTPGGRALSAGSGRHGVLGASGRMNRFLFTEVDLGWGRFPGRIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGSEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAYTWGWGYLGILGRGSDADVLKPTRVAIPLINAVGGS-DGGDARGGGVAAVEGHVTCATAGRSCTVLGTRHGAVLFSGFITTMTSNRFCAVFSEFGRLGDGLRCWRVQCECLPVTDTTVVTAIDPAGQVYEVQPRNGVALGGNSSSRYGNPSEQRVPLSANYAPCSSVILSPFDDERGQCWLETGGEVEEPGWGMNLSFGMVGVSRDGRLLFDSDEDDAGKERSAGVVHASARIGGSCEVSHGLRMEDGGTCVLTWGDGRTGH-------------VVTTAVVLGSAASGVRSASVNVSVDDSFGGSSXXXXXXXXXXXXGGPR-FRGVLALVDAAADKRDAADDRALA-QXXXXXXXXXXXXXEAKRRKVSQTDGR 600          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: D8LDL9_ECTSI (Hect E3 ubiquitin ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL9_ECTSI)

HSP 1 Score: 972 bits (2514), Expect = 0.000e+0
Identity = 518/613 (84.50%), Postives = 540/613 (88.09%), Query Frame = 0
Query:    6 QLSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGVLDLLFQGKPGAGNAITWIRSHHGGKDKGKDKDKDNKLKGNDGSLEDVSLVDWLCGLRDMSATGAYRASLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVDLGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRVAIPFINMVGGSNDGGDARGGGVDAVEGHVTCATAGRSCTVLGTRHGAVLFSGFITTTTGNRFCAAFSEFGRLGNGLRCWRVQCECLPVTDTTLVMAIDPAGQVYEVQPRNGVAFGGNRSSRYGNPSEQRVSLSADCAPCSSVILSPSDDERGRCWLETGGEVEESGWGMNVSCGMVGVSRDGRLLFDRDEDDVGKERCVGVFHASARIGDSSEVSHGLRLEDGGTSVLTWGDGRTGHLGHGAPAFEPKPKVVTTAVVLGSAASGVRSASVNVSVGDSLGXXXXXXXXXXXXXXXXXXAGFRGVLALVDAAADRRDAADGRAVATEXXXXXXXXXXXXXEAKRRKVSQTDGR 618
            +LSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGVLDLLFQGKPGAGNAI WIRSHHGGKD        NKLKGN GS++DVS+VDWLCGLRD SATGAY ASLGETHSLL+TPGGRALSAGSGRHGVLG+S RMNRFLFTEVDLGWGRFP RIPV AVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLI+SLAGERITQVAAG AHSVAVSWSGKAFTWGWGY G+LGRG D DVLKPTRVAIP +++ GGSN GGDARGGGV AVEGHVTCATAGRSCTVLGTRHG VLFSG ++T T N FCA FSEFGRLG+GLRCWRVQCECLP T TTLVMAIDPAGQVY+V+PRNGVA GGN SSRYGNPS+QRV LSAD APCSSVILSPSD+ERG+CWLETGGEVEESGWGM+V  GMVGVSRDGRLLFD DEDD GK+R VGV HASARIG+S EVSHGLRLEDGGTSVLTWGDGRTGHLGHG PAFEPKPK VTTAVVLGSAASGVRSASVNVSV DSLG            XXXXX AGFRGVLALVDAAADRRD          XXXXXXXXXXXXX   RRKVS  DGR
Sbjct:    4 ELSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGVLDLLFQGKPGAGNAIPWIRSHHGGKDXXXXXXXXNKLKGNGGSVDDVSVVDWLCGLRDTSATGAYSASLGETHSLLVTPGGRALSAGSGRHGVLGSSGRMNRFLFTEVDLGWGRFPGRIPVVAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIDSLAGERITQVAAGAAHSVAVSWSGKAFTWGWGYQGVLGRGGDDDVLKPTRVAIPLMDVSGGSNGGGDARGGGVVAVEGHVTCATAGRSCTVLGTRHGVVLFSGLMSTMTSNHFCAVFSEFGRLGDGLRCWRVQCECLPATGTTLVMAIDPAGQVYDVEPRNGVALGGNNSSRYGNPSKQRVPLSADYAPCSSVILSPSDNERGQCWLETGGEVEESGWGMDVCFGMVGVSRDGRLLFDSDEDDAGKDRSVGVVHASARIGNSCEVSHGLRLEDGGTSVLTWGDGRTGHLGHGTPAFEPKPKGVTTAVVLGSAASGVRSASVNVSVDDSLGGSSREVGGMHSSXXXXXEAGFRGVLALVDAAADRRD---------XXXXXXXXXXXXXXXXXRRKVSHADGR 607          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: A0A7S4NS28_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NS28_GUITH)

HSP 1 Score: 109 bits (273), Expect = 1.550e-23
Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 0
Query:  113 GAYRASLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVD--LGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRVAI 269
            G  R S    H++ +T  G   + G G+ G LG +    R + T V   + WG     +PVAA   G  HTL+L   G V S G GD GRLGHGN+     PT + +L  ER   +AAG AHSVA++  G+ +TWG G LG LG GSD+D + P ++A+
Sbjct:    7 GDDRVSRSFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWG-----MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLAL 160          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: A0A7S4KS11_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KS11_GUITH)

HSP 1 Score: 109 bits (273), Expect = 5.400e-22
Identity = 65/154 (42.21%), Postives = 88/154 (57.14%), Query Frame = 0
Query:  118 SLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVD--LGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRVAI 269
            S G  H++ +T  G   + G G+ G LG +    R + T V   + WG     +PVAA   G  HTL+L   G V S G GD GRLGHGN+     PT + +L  ER   +AAG AHSVA++  G+ +TWG G LG LG GSD+D + P ++A+
Sbjct:  214 SAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWG-----MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLAL 362          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: L1J1U2_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1U2_GUITC)

HSP 1 Score: 109 bits (273), Expect = 1.410e-21
Identity = 65/154 (42.21%), Postives = 88/154 (57.14%), Query Frame = 0
Query:  118 SLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVD--LGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRVAI 269
            S G  H++ +T  G   + G G+ G LG +    R + T V   + WG     +PVAA   G  HTL+L   G V S G GD GRLGHGN+     PT + +L  ER   +AAG AHSVA++  G+ +TWG G LG LG GSD+D + P ++A+
Sbjct:  330 SAGFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWG-----MPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLAL 478          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: A0A7S0EUL9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EUL9_9EUKA)

HSP 1 Score: 99.4 bits (246), Expect = 9.240e-19
Identity = 62/151 (41.06%), Postives = 87/151 (57.62%), Query Frame = 0
Query:  118 SLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVDLGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRVA 268
            ++G+ HSL  T GG   S G G  G LG +    R L   V    G     + V  VA G+ H+L  TA G ++S G G +GRLGHG+EASL  PTL+ +L+G  +T +AAG  H++A++ +G+ ++WG G  G LG G     L PT +A
Sbjct:   93 AVGDDHSLAATEGGALYSWGYGIDGRLGLAEAEGRLLPELVSALGG-----VRVTGVAAGRWHSLARTADGALYSWGGGGFGRLGHGDEASLRLPTLVAALSGVHVTGMAAGAHHTLALTDAGRLYSWGLGGNGRLGHGDTEPRLLPTPIA 238          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: A0A8J2W7X2_9CRUS (HECT-type E3 ubiquitin transferase n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2W7X2_9CRUS)

HSP 1 Score: 101 bits (251), Expect = 2.580e-18
Identity = 68/168 (40.48%), Postives = 86/168 (51.19%), Query Frame = 0
Query:  100 VDWLCGLRDMSATGAYRASLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVDLGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRV 267
            VDW+  L+ +S  G      G     L+T  G+A + G G +G LG     N     ++         ++   AV  G RH L LTA G V S G GD G+LGHG+  SL  P  IE+L G RI  VAAG  HS AV+ SG+ +TWG G  G LG G +   L P RV
Sbjct: 2985 VDWMVSLQPISVAG------GSKSLFLVTQSGKAYACGEGSNGRLGLGHSKNVNSPHQITALSQHVVRKV---AVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLETPRCIEALNGFRIRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRV 3143          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: A0A162DDE6_9CRUS (HECT-type E3 ubiquitin transferase n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A162DDE6_9CRUS)

HSP 1 Score: 100 bits (249), Expect = 4.510e-18
Identity = 68/168 (40.48%), Postives = 88/168 (52.38%), Query Frame = 0
Query:  100 VDWLCGLRDMSATGAYRASLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVDLGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRV 267
            VDW+  L+ ++  G      G     L+T  G+A + G G +G LG     N     ++     ++  R    AV  G RH L LTA G V S G GD G+LGHG+ ASL  P  +E+L G RI  VAAG  HS AV+ SG+ +TWG G  G LG G +   L P RV
Sbjct: 3021 VDWMVSLQPINLAG------GSKSLFLVTQSGKAYACGEGSNGRLGLGHSKNINTPHQI-FALSQYVVR--KIAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVASLDTPRCVEALNGFRIRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRV 3179          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: E9GGZ0_DAPPU (HECT-type E3 ubiquitin transferase n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9GGZ0_DAPPU)

HSP 1 Score: 99.8 bits (247), Expect = 7.800e-18
Identity = 67/168 (39.88%), Postives = 85/168 (50.60%), Query Frame = 0
Query:  100 VDWLCGLRDMSATGAYRASLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVDLGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRV 267
            VDW   L+ +S  G      G     L+T  G+A + G G +G LG     N     ++         ++   AV  G RH L LTA G V S G GD G+LGHG+  SL  P  IE+L G R+  VAAG  HS AV+ SG+ +TWG G  G LG G +   L P RV
Sbjct: 2725 VDWTVSLQPISVAG------GSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKV---AVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRV 2883          
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Match: UPI001EDF7940 (E3 ubiquitin-protein ligase HERC2-like isoform X1 n=7 Tax=Daphnia TaxID=6668 RepID=UPI001EDF7940)

HSP 1 Score: 99.8 bits (247), Expect = 7.860e-18
Identity = 67/168 (39.88%), Postives = 85/168 (50.60%), Query Frame = 0
Query:  100 VDWLCGLRDMSATGAYRASLGETHSLLITPGGRALSAGSGRHGVLGASSRMNRFLFTEVDLGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGRLGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYLGILGRGSDADVLKPTRV 267
            VDW   L+ +S  G      G     L+T  G+A + G G +G LG     N     ++         ++   AV  G RH L LTA G V S G GD G+LGHG+  SL  P  IE+L G R+  VAAG  HS AV+ SG+ +TWG G  G LG G +   L P RV
Sbjct: 3039 VDWTVSLQPISVAG------GSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKV---AVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRV 3197          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5809.16265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L840_9PHAE0.000e+087.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDL9_ECTSI0.000e+084.50Hect E3 ubiquitin ligase n=1 Tax=Ectocarpus silicu... [more]
A0A7S4NS28_GUITH1.550e-2341.51Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A7S4KS11_GUITH5.400e-2242.21Hypothetical protein n=3 Tax=Guillardia theta TaxI... [more]
L1J1U2_GUITC1.410e-2142.21Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S0EUL9_9EUKA9.240e-1941.06Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A8J2W7X2_9CRUS2.580e-1840.48HECT-type E3 ubiquitin transferase n=1 Tax=Daphnia... [more]
A0A162DDE6_9CRUS4.510e-1840.48HECT-type E3 ubiquitin transferase n=2 Tax=Daphnia... [more]
E9GGZ0_DAPPU7.800e-1839.88HECT-type E3 ubiquitin transferase n=1 Tax=Daphnia... [more]
UPI001EDF79407.860e-1839.88E3 ubiquitin-protein ligase HERC2-like isoform X1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 487..508
score: 28.79
coord: 223..236
score: 35.71
coord: 242..258
score: 32.35
coord: 189..205
score: 43.14
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 239..271
e-value: 1.7E-5
score: 25.3
coord: 188..236
e-value: 1.2E-12
score: 48.2
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 131..187
score: 11.469
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 188..239
score: 14.323
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 492..540
score: 8.514
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 65..422
e-value: 2.9E-37
score: 130.4
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 102..521
NoneNo IPR availablePANTHERPTHR22870:SF330E3 UBIQUITIN-PROTEIN LIGASE HERC2coord: 115..281
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 115..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5809contigEcto-sp13_S_contig5809:2856..8455 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5809.16265.1mRNA_Ecto-sp13_S_contig5809.16265.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5809 2856..8455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5809.16265.1 ID=prot_Ecto-sp13_S_contig5809.16265.1|Name=mRNA_Ecto-sp13_S_contig5809.16265.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=619bp
MVLASQLSGLPLEVLQGCILVPFGTPRDVAHLLAASRGLRSLRRGYVSGV
LDLLFQGKPGAGNAITWIRSHHGGKDKGKDKDKDNKLKGNDGSLEDVSLV
DWLCGLRDMSATGAYRASLGETHSLLITPGGRALSAGSGRHGVLGASSRM
NRFLFTEVDLGWGRFPERIPVAAVACGQRHTLILTAVGTVHSCGLGDYGR
LGHGNEASLSRPTLIESLAGERITQVAAGEAHSVAVSWSGKAFTWGWGYL
GILGRGSDADVLKPTRVAIPFINMVGGSNDGGDARGGGVDAVEGHVTCAT
AGRSCTVLGTRHGAVLFSGFITTTTGNRFCAAFSEFGRLGNGLRCWRVQC
ECLPVTDTTLVMAIDPAGQVYEVQPRNGVAFGGNRSSRYGNPSEQRVSLS
ADCAPCSSVILSPSDDERGRCWLETGGEVEESGWGMNVSCGMVGVSRDGR
LLFDRDEDDVGKERCVGVFHASARIGDSSEVSHGLRLEDGGTSVLTWGDG
RTGHLGHGAPAFEPKPKVVTTAVVLGSAASGVRSASVNVSVGDSLGGSSR
EVGGSSGGGSGGGEAGFRGVLALVDAAADRRDAADGRAVATEEEGEEEEE
EEEGGEAKRRKVSQTDGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II