prot_Ecto-sp13_S_contig5808.16262.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5808.16262.1
Unique Nameprot_Ecto-sp13_S_contig5808.16262.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length130
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5808.16262.1 vs. uniprot
Match: D7G014_ECTSI (Ankyrin domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G014_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 2.380e-41
Identity = 103/127 (81.10%), Postives = 107/127 (84.25%), Query Frame = 0 
Query:    1 VRALIGAGAELNTADGDGCTPLHLAVFRGFEEVVQEXXXXXXXXXXXXXXXXXXXXXXSAHGSLGMVKAILRGSRESNLPYPTDHLEMPPLHRAALGGHCEVISELLRQGSSLHTLAGNARTALHAV 127
            VRALIGAGA+L+TADGD                   XXXXXXXXXXXXXXXXXXXXXXSAHGSLGMVKAILRGSRESNLP PTDHLEMPPLHRAALGGHCEV+SELLRQGSSLHTLAGNARTALHA+
Sbjct:  164 VRALIGAGADLDTADGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAHGSLGMVKAILRGSRESNLPCPTDHLEMPPLHRAALGGHCEVMSELLRQGSSLHTLAGNARTALHAL 290
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5808.16262.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G014_ECTSI2.380e-4181.10Ankyrin domain protein n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 17..46
e-value: 1.0E-5
score: 35.0
coord: 86..115
e-value: 2.6
score: 17.1
coord: 50..79
e-value: 0.029
score: 23.5
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 90..114
e-value: 0.0045
score: 17.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 50..72
score: 9.271
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 17..49
score: 14.292
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 86..118
score: 8.523
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..129
e-value: 4.0E-32
score: 113.1
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..126
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1..73
e-value: 2.1E-11
score: 44.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..130
score: 36.419
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 1..76
coord: 47..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5808contigEcto-sp13_S_contig5808:8372..8761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5808.16262.1mRNA_Ecto-sp13_S_contig5808.16262.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5808 8372..8761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5808.16262.1 ID=prot_Ecto-sp13_S_contig5808.16262.1|Name=mRNA_Ecto-sp13_S_contig5808.16262.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=130bp
VRALIGAGAELNTADGDGCTPLHLAVFRGFEEVVQELVDAGASVDTSDSE
GETPLHTASAHGSLGMVKAILRGSRESNLPYPTDHLEMPPLHRAALGGHC
EVISELLRQGSSLHTLAGNARTALHAVSLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom