prot_Ecto-sp13_S_contig5808.16261.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5808.16261.1
Unique Nameprot_Ecto-sp13_S_contig5808.16261.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length212
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5808.16261.1 vs. uniprot
Match: D7G015_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G015_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 1.970e-134
Identity = 194/213 (91.08%), Postives = 202/213 (94.84%), Query Frame = 0 
Query:    1 MRVLGVVLFGSTTQAFLTVPP--HPPSTARATNPQLHVPCARHLRLRWPRASSTAVRMLGGEEGSEEEKGYTDVTVREAVEWTMSKDSEFSYIDIRSAEEHEKLATVRGALCIPAFDIVMPEAEEKGEGLDDQDSNDTGYAPDYNFEELEYTVKPNFVDMMKARFDLDAKLLIGCKTSRSAKACQLLVAAGFTEIYNVESQIFMRTRAPEVWS 211
            MRVLGVVLFGSTTQAFLTVPP   PPSTA A+NPQLHVPCARHLRLRWPRASSTAVRMLGGE+G EEEKGYTDVTVREAVEWTMS+DSEFSYIDIRSAEEHEKLATVRGALCIPAFD+VMPEAEE+GEGLDDQD +DTGYAP YNFEE +YTVKP+FVD MKARFDLDAKLLIGCKT RSAKACQLLV AGFTEIYNVESQIFMRTRAPEVWS
Sbjct:    1 MRVLGVVLFGSTTQAFLTVPPLTSPPSTACASNPQLHVPCARHLRLRWPRASSTAVRMLGGEDGGEEEKGYTDVTVREAVEWTMSRDSEFSYIDIRSAEEHEKLATVRGALCIPAFDLVMPEAEEQGEGLDDQDGDDTGYAPAYNFEESDYTVKPDFVDTMKARFDLDAKLLIGCKTYRSAKACQLLVEAGFTEIYNVESQIFMRTRAPEVWS 213
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BLAST of mRNA_Ecto-sp13_S_contig5808.16261.1 vs. uniprot
Match: A0A836CME5_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CME5_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.430e-21
Identity = 55/142 (38.73%), Postives = 79/142 (55.63%), Query Frame = 0 
Query:   67 KGYTDVTVREAVEWTMSKDSEFSYIDIRSAEEHEKLATVRGALCIPAFDIVMPEAEEKGEGLDDQDSNDTGYAPDYNFEE--LEYTVKPNFVDMMKARFDLDAKLLIGCKT-SRSAKACQLLVAAGFTEIYNVESQIFMRTR 205
            +G+ D+TV +AV+W       F+Y+DIR  EEHE +   + ++ +PAF                         PD +FE+  +E+   P F   ++ARF  DAKLLIGC+  +RS  AC+ LVAAGF  ++NVES  +MRTR
Sbjct:    7 QGFKDITVVQAVQWMEKPGHGFNYLDIRCEEEHETMVAPKSSINVPAF------------------------TPDGDFEDENVEWIPVPTFEADVEARFGKDAKLLIGCRAGNRSTLACKRLVAAGFENLWNVESSSYMRTR 124
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BLAST of mRNA_Ecto-sp13_S_contig5808.16261.1 vs. uniprot
Match: A0A2V8HD56_9BACT (Rhodanese domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8HD56_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 6.760e-6
Identity = 26/48 (54.17%), Postives = 36/48 (75.00%), Query Frame = 0 
Query:  150 TVKPNFVDMMKARFDLDAKLLIGCKT-SRSAKACQLLVAAGFTEIYNV 196
            T  P+F+D++KA F  DAKLL+ C+  +RS +ACQLL +AG+T I NV
Sbjct:  123 TPNPDFIDVVKANFPADAKLLVACQAGARSLQACQLLASAGYTNITNV 170
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BLAST of mRNA_Ecto-sp13_S_contig5808.16261.1 vs. uniprot
Match: A0A6B1CPK6_9BACT (Rhodanese-like domain-containing protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6B1CPK6_9BACT)

HSP 1 Score: 53.9 bits (128), Expect = 8.550e-6
Identity = 43/131 (32.82%), Postives = 65/131 (49.62%), Query Frame = 0 
Query:   69 YTDVTVREAVEWTMSKDSEFSYIDIRSAEEHEKLATVRGALCIPAFDIVMPEAEEKGEGLDDQDSNDTGYAPDYNFEELEYTVKPN--FVDMMKARFDLDAKLLIGCKT-SRSAKACQLLVAAGFTEIYNV 196
            Y +++  EA E  +  D+   YID+RS  E+E      G     AF+I + +    G                         + PN  FV +++A F  DAKLL+GC++ +RS +AC+ LVAAGFT++ NV
Sbjct:    4 YQNLSPTEAKE-LLEGDAGAVYIDVRSIPEYE------GGHPAGAFNIPIMQRHAAG-------------------------MVPNLDFVQVVQAHFAADAKLLVGCQSGARSMRACEALVAAGFTDVANV 102
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BLAST of mRNA_Ecto-sp13_S_contig5808.16261.1 vs. uniprot
Match: A0A7C2EQK6_9BACT (Rhodanese-like domain-containing protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7C2EQK6_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 1.530e-5
Identity = 38/135 (28.15%), Postives = 66/135 (48.89%), Query Frame = 0 
Query:   63 SEEEKGYTDVTVREAVEWTMSKDSEFSYIDIRSAEEHEKLATVRGALCIPAFDIVMPEAEEKGEGLDDQDSNDTGYAPDYNFEELEYTVKPNFVDMMKARFDLDAKLLIGCKTS-RSAKACQLLVAAGFTEIYNV 196
            ++E +   +++ +EA +  +  D ++ Y+D+RS  E +     RGA+ IP    +                  +G  P+ +F+ +           ++A    DAKL IGCKT  RSA+AC++L  AG+T + NV
Sbjct:    6 NDERESMKEISAQEAYD-LLENDKDYIYLDVRSVPEFDA-GHPRGAINIPLMHFIPG----------------SGMQPNQDFQAV-----------VEANIPKDAKLAIGCKTGGRSARACEVLAQAGYTNLANV 111
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BLAST of mRNA_Ecto-sp13_S_contig5808.16261.1 vs. uniprot
Match: A0A2E8HLZ8_9BACT (Rhodanese n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E8HLZ8_9BACT)

HSP 1 Score: 52.0 bits (123), Expect = 4.540e-5
Identity = 38/116 (32.76%), Postives = 59/116 (50.86%), Query Frame = 0 
Query:   82 MSKDSEFSYIDIRSAEEHEKLATVRGALCIPAFDIVMPEAEEKGEGLDDQDSNDTGYAPDYNFEELEYTVKPNFVDMMKARFDLDAKLLIGCKT-SRSAKACQLLVAAGFTEIYNV 196
            +  +S ++Y+D+RS  E        GAL IP   ++ PEA               G  P+           P+F+ ++ A FD  A +L+GC+  SRS +A ++LVAAGFT++ NV
Sbjct:   14 LMDESAYAYVDVRSEPEFLN-GHPSGALNIP---VLFPEA--------------LGMVPN-----------PDFLTVVLANFDRQAPILLGCQMGSRSGRAAEILVAAGFTDVSNV 100
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5808.16261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G015_ECTSI1.970e-13491.08Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CME5_9STRA6.430e-2138.73Rhodanese domain-containing protein n=1 Tax=Tribon... [more]
A0A2V8HD56_9BACT6.760e-654.17Rhodanese domain-containing protein n=2 Tax=Acidob... [more]
A0A6B1CPK6_9BACT8.550e-632.82Rhodanese-like domain-containing protein n=2 Tax=G... [more]
A0A7C2EQK6_9BACT1.530e-528.15Rhodanese-like domain-containing protein n=1 Tax=B... [more]
A0A2E8HLZ8_9BACT4.540e-532.76Rhodanese n=1 Tax=Gemmatimonadetes bacterium TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 69..206
e-value: 2.1E-16
score: 62.0
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 65..197
NoneNo IPR availablePANTHERPTHR44542FAMILY NOT NAMEDcoord: 64..198
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..211
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..15
score: 0.481
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 84..199
score: 9.345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5808contigEcto-sp13_S_contig5808:13..2704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5808.16261.1mRNA_Ecto-sp13_S_contig5808.16261.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5808 13..2766 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5808.16261.1 ID=prot_Ecto-sp13_S_contig5808.16261.1|Name=mRNA_Ecto-sp13_S_contig5808.16261.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=212bp
MRVLGVVLFGSTTQAFLTVPPHPPSTARATNPQLHVPCARHLRLRWPRAS
STAVRMLGGEEGSEEEKGYTDVTVREAVEWTMSKDSEFSYIDIRSAEEHE
KLATVRGALCIPAFDIVMPEAEEKGEGLDDQDSNDTGYAPDYNFEELEYT
VKPNFVDMMKARFDLDAKLLIGCKTSRSAKACQLLVAAGFTEIYNVESQI
FMRTRAPEVWS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036873Rhodanese-like_dom_sf
IPR001763Rhodanese-like_dom