prot_Ecto-sp13_S_contig57911.16232.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57911.16232.1
Unique Nameprot_Ecto-sp13_S_contig57911.16232.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length106
Homology
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: A0A6H5K2N3_9PHAE (WSC domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N3_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 2.240e-67
Identity = 93/100 (93.00%), Postives = 97/100 (97.00%), Query Frame = 0
Query:    6 DYTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIESLTTM 105
            +YTHLGCFVDKKSDRVMGHKIADE+VDTEFCYDYCL ENAPLMATQWGIECWCATEVD+EYERHGEA ELCDYKCGGDKTE CGGYNAFDLYVIESLTT+
Sbjct:   41 NYTHLGCFVDKKSDRVMGHKIADEEVDTEFCYDYCLGENAPLMATQWGIECWCATEVDLEYERHGEAEELCDYKCGGDKTENCGGYNAFDLYVIESLTTI 140          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: D8LNN0_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNN0_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 3.540e-65
Identity = 88/105 (83.81%), Postives = 97/105 (92.38%), Query Frame = 0
Query:    1 VQPNSDYTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIESLTTM 105
            +    DYTHLGCFVDKKSDRV+G+K+ADE+VDTEFCYDYC E+NAPLMATQWGIECWCA EVD++YERHGEAGELCDYKCGGD  EICGGYNAFDLYVIESLTT+
Sbjct:   36 IDSTRDYTHLGCFVDKKSDRVLGNKLADEEVDTEFCYDYCEEQNAPLMATQWGIECWCANEVDLDYERHGEAGELCDYKCGGDNKEICGGYNAFDLYVIESLTTI 140          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: D7FZB0_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZB0_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 9.810e-63
Identity = 85/102 (83.33%), Postives = 92/102 (90.20%), Query Frame = 0
Query:    4 NSDYTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIESLTTM 105
            N DYTHLGCFVD +SDRV+GHK+ DE+VDTEFCYDYCLE+NAP MATQWGIECWCATEVD+EYERHGEA ELCDYKCGGD  EICGGY AFDLY IES TT+
Sbjct:   44 NRDYTHLGCFVDNQSDRVLGHKLVDEEVDTEFCYDYCLEKNAPFMATQWGIECWCATEVDLEYERHGEAEELCDYKCGGDNNEICGGYYAFDLYEIESFTTI 145          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: D8LRJ2_ECTSI (Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ2_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 4.630e-62
Identity = 83/102 (81.37%), Postives = 90/102 (88.24%), Query Frame = 0
Query:    4 NSDYTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIESLTTM 105
            N DYTHLGCFVD +SDRV+G+K+ DE+VDTE CYDYCLE+NAP MATQWGIECWCATE D+EYERHGEA ELCDYKCGGD  EICGGY AFDLY IES TTM
Sbjct:   74 NRDYTHLGCFVDNRSDRVLGYKLVDEEVDTELCYDYCLEQNAPFMATQWGIECWCATEPDLEYERHGEAEELCDYKCGGDNNEICGGYLAFDLYEIESFTTM 175          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.310e-28
Identity = 46/97 (47.42%), Postives = 66/97 (68.04%), Query Frame = 0
Query:    7 YTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIESLT 103
            Y+++GCF D K DRV  +      + T  C +YCL+  A  MATQ+GIECWC+ + ++EY+RH +   +CD +CGG+ T+ICGG++AFDLY I   T
Sbjct:   11 YSYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDG--VCDCECGGEATDICGGFDAFDLYKITEPT 105          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 9.940e-28
Identity = 46/97 (47.42%), Postives = 64/97 (65.98%), Query Frame = 0
Query:    7 YTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIESLT 103
            Y+++GCF D K DRV  +      + T  C +YCL+  A  MATQ+G ECWC+ + +VEY+RH +   +CD+ CGGD  +ICGG++AFDLY I   T
Sbjct:  433 YSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDG--VCDHACGGDAADICGGFDAFDLYKITEPT 527          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 5.570e-26
Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 0
Query:    1 VQPNSDYTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERH---GEAGELCDYKCGGDKTEICGGYNAFDLYVIESLTTM 105
            V    +  ++GCF D K DR++G K+    + TE C  +C E  A  MATQ+G ECWC+ +  ++YERH    +A  +CD  C GDKT+ CGG+N+FDLY +++ +T+
Sbjct:  390 VGDGEEAEYVGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGAAFMATQFGFECWCSADELLDYERHYQMNDADAVCDMSCRGDKTQPCGGFNSFDLYKLQTTSTV 497          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.740e-18
Identity = 39/96 (40.62%), Postives = 53/96 (55.21%), Query Frame = 0
Query:    3 PNSDYTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGE--------LCDYKCGGDKTEICGG 90
            P   YTH+GCF D K DRV+   I    +    CY++C++  A  MATQ+G ECWC+ + D++Y RH +  E        LC  +C GDK  I  G
Sbjct:  447 PVEAYTHVGCFSDNKEDRVLEAMITSSAMTGAMCYEHCVDRRATYMATQYGFECWCSHDSDLDYARHSDDLERVDGRDYGLCGTRCEGDKVRILHG 542          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 5.070e-18
Identity = 39/104 (37.50%), Postives = 53/104 (50.96%), Query Frame = 0
Query:    1 VQPNSDYTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIESLTT 104
            +   SD   LGCF D    RVM  ++ D+ +  + C  YC +      A QW IECWCA E     E        CD+ CGGD  +ICGG+ AF +Y + + +T
Sbjct:   65 ITGQSDPNSLGCFADTSDGRVMEAQLTDQAMTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLGTCDFACGGDSDQICGGFWAFTVYEVGTEST 168          
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Match: D8LEL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 4.040e-14
Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 0
Query:    7 YTHLGCFVDKKSDRVMGHKI-ADEKVDTEFCYDYCLEENAPLMATQWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIESLTT 104
            +  LGC+ D +  R+M   + +D  + TE C   CL   +   ATQ+G ECWC ++   +Y  HGE+ E C Y C GD  ++CGG++A ++Y+    T+
Sbjct:   93 FVALGCYGDDREARIMDDLVLSDSSMTTELCELTCL--GSTYFATQYGRECWCGSD-GADYALHGESTE-CTYPCSGDADQLCGGFDAANVYLFTGETS 187          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57911.16232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2N3_9PHAE2.240e-6793.00WSC domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LNN0_ECTSI3.540e-6583.81WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FZB0_ECTSI9.810e-6383.33WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LRJ2_ECTSI4.630e-6281.37Oxt n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5JMV6_9PHAE2.310e-2847.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LED7_ECTSI9.940e-2847.42EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FU28_ECTSI5.570e-2642.59EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JN72_9PHAE2.740e-1840.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G8D9_ECTSI5.070e-1837.50Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
D8LEL0_ECTSI4.040e-1436.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 6..100
e-value: 0.0013
score: 21.9
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 10..90
e-value: 2.6E-15
score: 56.4
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 6..100
score: 9.595
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 8..97
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 8..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57911contigEcto-sp13_S_contig57911:99..868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57911.16232.1mRNA_Ecto-sp13_S_contig57911.16232.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57911 99..868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57911.16232.1 ID=prot_Ecto-sp13_S_contig57911.16232.1|Name=mRNA_Ecto-sp13_S_contig57911.16232.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
VQPNSDYTHLGCFVDKKSDRVMGHKIADEKVDTEFCYDYCLEENAPLMAT
QWGIECWCATEVDVEYERHGEAGELCDYKCGGDKTEICGGYNAFDLYVIE
SLTTM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd