prot_Ecto-sp13_S_contig5786.16225.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5786.16225.1
Unique Nameprot_Ecto-sp13_S_contig5786.16225.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length671
Homology
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: A0A6H5KI42_9PHAE (SP-RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI42_9PHAE)

HSP 1 Score: 670 bits (1728), Expect = 9.080e-227
Identity = 516/580 (88.97%), Postives = 519/580 (89.48%), Query Frame = 0
Query:   73 QVVRLVGVEEVLKNVKQRSHLSKKEALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKKAKDDAAGAGSGQNGGVVDGGECDTVDIDGDDVVTTGDNEAANGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RSANEPEVFDLCSSDEDDELPAAPXXXXXXXXXXXXXXXXXXXXXXX--NFSSNGXXXXXXXXXXXXXXXXXXERRYGYSSLVQPKDSSGSGRAPSPPARAXXXXXXXXXXXXXXXXXXXXXXXXXXSCSSSRYGGETARGSSCPASAQVSDAWARAGGGIADLSIGSSSSGGADGGRGVDWLSGGGAXXXXXXXXXXXQQHGECSAQQLSGXXXXXXXXT-RLWDSGSSFGTVRSXXXXXXXXXXAA--------GTAVIPGEKTAGQTPQPWYPGSSPGSRQQRPPALHLGXXXXXXXXXXXXXXXXXXXXYPRPI 638
            QVVRLVGVEEVLKNVKQRSHLSKKEALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYC+HLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRK AKDDAAGAGSGQNGGVVDGGECDTVDIDGDDVV +GDNEAANGSA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RS NEPEVFDLCSSDEDDELPAAPXXXXX      XXXXXXXXXXXX  NFSSN XXXXXXXXXXXXX     ERRYGYSSLVQPKDSSGSGRAPSPPARAXXXXXXXXXXXXXXXXXXXXXXXXXX CSSSRYGGETARGSSCPASAQVSDAWARAGGGIADLSIGSS SGG DGGRGVDWLSG   XXXXXXXXXXX             XXXXXXXX  RLWDSGSSFGTVRSXXXXXXXXXX          GTAVIPGEKTAGQTPQPWYPGSSPG RQQRPPALHLG XXXXXXXXXXXXX      YPRP+
Sbjct:  301 QVVRLVGVEEVLKNVKQRSHLSKKEALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKMAKDDAAGAGSGQNGGVVDGGECDTVDIDGDDVVMSGDNEAANGSAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARSTNEPEVFDLCSSDEDDELPAAPXXXXXAVGAPSXXXXXXXXXXXXXXNFSSN-XXXXXXXXXXXXXEGAGGERRYGYSSLVQPKDSSGSGRAPSPPARAXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSSRYGGETARGSSCPASAQVSDAWARAGGGIADLSIGSSGSGGGDGGRGVDWLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLWDSGSSFGTVRSXXXXXXXXXXXXXXXXXXXXGTAVIPGEKTAGQTPQPWYPGSSPGRRQQRPPALHLGGXXXXXXXXXXXXXRARQGGYPRPL 879          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: D8LQR5_ECTSI (Similar to retinoic acid induced 17, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQR5_ECTSI)

HSP 1 Score: 476 bits (1226), Expect = 4.430e-155
Identity = 327/386 (84.72%), Postives = 331/386 (85.75%), Query Frame = 0
Query:   97 EALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKKAKDDAAGAGSGQNGGVVDGGECDTVDIDGDDVVTTGDNEAANGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSA----NEPEVFDLCSSDEDDELPAAPXXXXXXXXXXXXXXXXXXXXXXXNFSSNGXXXXXXXXXXXXXXXXXXERRYGYSSLVQPKDSSGSGRAPSPPARAXXXXXXXXXXXXXXXXXXXXXXXXXXSCSSSRYGGETARGSSCPASAQ 478
            EALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYC+HLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKKAKDDAAGAGSGQNGGVVDGGECDTVDID DDVV +GDN AANGSA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX       NEPEVFDLCSSD+DDELPAAPXXXXX                  NFSSNG XXXXXXXXXXXXXXXXX R YGYSSLVQPKDSSGSGRAPSP ARA                   XXXXXX SCSSSRYGG+TARGSS PASAQ
Sbjct:  275 EALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCKHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKKAKDDAAGAGSGQNGGVVDGGECDTVDIDVDDVVRSGDNLAANGSAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPEVFDLCSSDDDDELPAAPXXXXXAVGAPTSAAAAA------NFSSNGTXXXXXXXXXXXXXXXXXXR-YGYSSLVQPKDSSGSGRAPSPAARAPAAGRCGSNGDSSNVGNVEXXXXXXPSCSSSRYGGDTARGSSRPASAQ 653          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: W7TGK7_9STRA (Sumo ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGK7_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.350e-26
Identity = 87/258 (33.72%), Postives = 132/258 (51.16%), Query Frame = 0
Query:   37 GDVRAVYSRHERVESRNVSKCGIPKCVCMY-----ACVLFPQVVRLVGVEEVLKNVKQRSHL-SKKEALRRVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLE-EQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKKAKDDAAGAGSGQNGGVVDGGECDTVDIDGDDV 287
            G  R      E V+   +++ GI +   M+       V+  Q+V++VGV+ +L+ V +     + +E+L R+++SF+GC  ++S  E                  D +LMAT TRLSLRCPLG+ PI  P RG  C HLQCFDL+TFL +N+  A A W+CGVCN  +  E L VD ++  ++  +E  + + +D + +EI+  G W+           S    +K K +   AG  +   V DG   D    D DDV
Sbjct:  349 GSQRKSKGHSEPVDVFLLARTGINRVGLMHNDEGKGFVIMVQIVKVVGVQRLLRKVVESPDTPTAEESLERIRQSFRGC-SVDSDTE------------------DGELMATVTRLSLRCPLGMTPIRIPARGTDCHHLQCFDLDTFLRYNERGAAAGWRCGVCNTVLTLEGLRVDAFMRNILAQIEARKEMNEDLDSIEINHQGEWELF-------NSSAASSRKRKAEGNVAGEEEGKAVSDGKVVDPEVADDDDV 580          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: D0MSX4_PHYIT (SUMO ligase, putative n=10 Tax=Phytophthora TaxID=4783 RepID=D0MSX4_PHYIT)

HSP 1 Score: 111 bits (278), Expect = 6.080e-22
Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 0
Query:  132 GDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKKAKDDAAGA 263
            G + +DD++AT T LS+RCPLGL  I  P RG +C+HLQCFDL TF+ F+K     AW+C VC   IK  DL +D YL +++  +E +   DD EEVEI  DG W   L+++   +   +  K  + +AAGA
Sbjct:  319 GSEDEDDVVATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMIFSKKARSKAWRCTVCYQFIKATDLRIDPYLKKLLAEVEGE---DDLEEVEIFPDGSWKRRLKEEAVAEPPAKKVKAEQTEAAGA 447          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: A0A833T3K6_PHYIN (MIZ/SP-RING zinc finger n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T3K6_PHYIN)

HSP 1 Score: 111 bits (278), Expect = 7.780e-22
Identity = 59/132 (44.70%), Postives = 82/132 (62.12%), Query Frame = 0
Query:  132 GDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKKAKDDAAGA 263
            G + +DD++AT T LS+RCPLGL  I  P RG +C+HLQCFDL TF+ F+K     AW+C VC   IK  DL +D YL +++  +E +   DD EEVEI  DG W   L+++   +   +  K  + +AAGA
Sbjct:  393 GSEDEDDVVATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMIFSKKARSKAWRCTVCYQFIKATDLRIDPYLKKLLAEVEGE---DDLEEVEIFPDGSWKRRLKEEAVAEPPAKKVKAEQTEAAGA 521          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: A0A485LNC0_9STRA (Aste57867_23638 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNC0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.520e-21
Identity = 58/120 (48.33%), Postives = 77/120 (64.17%), Query Frame = 0
Query:  132 GDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDP-ILEDQKAGKMSR 250
            GD+ DDD++AT T LSLRCPLGL  I  P RG +C+HLQCFDL TFL FN+     AWKC VC+  I   +L +D YL +++R + +    D+ EEVEI  D  W   ++ED+K  K  +
Sbjct:  375 GDEDDDDIVATCTMLSLRCPLGLCVIELPARGIHCKHLQCFDLKTFLMFNRSARSRAWKCIVCHKFIALAELRIDPYLKKLLRDVADD---DELEEVEIFPDASWKKRVVEDEKEEKKPK 491          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: A0A3M6VVF6_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVF6_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.080e-21
Identity = 62/131 (47.33%), Postives = 83/131 (63.36%), Query Frame = 0
Query:  111 DLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILE 241
            + + HL  D ++ E I K  G +D +DD++AT T LS+RCPLGL  I  P RG +C+HLQCFDL TFL F+K     AW+C VC+  IK  DL +D YL +++  +E +   D+ EEVEI  DG W   LE
Sbjct:  369 EASKHLTYDIAKQEVI-KSFGSED-EDDVVATVTMLSVRCPLGLCVINLPARGLHCKHLQCFDLRTFLLFSKKARSKAWRCTVCHQFIKAADLRIDPYLKKLLTEVEGE---DELEEVEIFPDGSWKRRLE 494          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: A0A2P4X7F3_9STRA (SUMO ligase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7F3_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.770e-21
Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 0
Query:  132 GDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQ 243
            G + +DD++AT T LS+RCPLGL  I  P RG +C+HLQCFDL TF+ F+K     AW+C VC+  IK  DL +D YL +++  +E +   D+ EEVEI  DG W   +E++
Sbjct:  188 GSEDEDDVVATVTMLSVRCPLGLCVINLPARGLHCKHLQCFDLKTFMLFSKKARSKAWRCTVCHQFIKASDLRIDPYLKKLLAEVEGE---DELEEVEIFPDGSWKRRVEEE 296          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: W2PCS1_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PCS1_PHYPN)

HSP 1 Score: 108 bits (271), Expect = 4.320e-21
Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 0
Query:  132 GDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILED 242
            G + +DD++AT T LS+RCPLGL  I  P RG +C+HLQCFDL TF+ F+K     AW+C VC+  IK  DL +D YL +++  +E +   D+ EEVEI  DG W   LE+
Sbjct:  394 GSEDEDDVVATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMMFSKKARSKAWRCTVCHRFIKATDLRIDPYLKKLLAEVEGE---DELEEVEIFPDGSWKRRLEE 501          
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Match: A0A0W8CF55_PHYNI (Splicing factor 3A subunit 3 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CF55_PHYNI)

HSP 1 Score: 109 bits (272), Expect = 6.900e-21
Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 0
Query:  132 GDDSDDDLMATATRLSLRCPLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKPEDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSRRDRKKAKDDAAGA 263
            G + +DD++AT T LS+RCPLGL  I  P RG +C+HLQCFDL TF+ F+K     AW+C VC+  IK  DL +D YL +++  +E +   D+ EEVEI  DG W   LE+    +   +  K  + + AGA
Sbjct:  333 GSEDEDDVVATVTMLSVRCPLGLCVINLPARGIHCKHLQCFDLKTFMMFSKKARSKAWRCTVCHRFIKATDLRIDPYLKKLLAEVEGE---DELEEVEIFPDGSWKRRLEEDLVPEPPAKKVKAEQTEIAGA 461          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5786.16225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI42_9PHAE9.080e-22788.97SP-RING-type domain-containing protein n=1 Tax=Ect... [more]
D8LQR5_ECTSI4.430e-15584.72Similar to retinoic acid induced 17, partial n=1 T... [more]
W7TGK7_9STRA1.350e-2633.72Sumo ligase n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
D0MSX4_PHYIT6.080e-2244.70SUMO ligase, putative n=10 Tax=Phytophthora TaxID=... [more]
A0A833T3K6_PHYIN7.780e-2244.70MIZ/SP-RING zinc finger n=1 Tax=Phytophthora infes... [more]
A0A485LNC0_9STRA1.520e-2148.33Aste57867_23638 protein n=1 Tax=Aphanomyces stella... [more]
A0A3M6VVF6_9STRA3.080e-2147.33Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A2P4X7F3_9STRA3.770e-2147.32SUMO ligase n=1 Tax=Phytophthora palmivora var. pa... [more]
W2PCS1_PHYPN4.320e-2148.65Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A0W8CF55_PHYNI6.900e-2143.94Splicing factor 3A subunit 3 n=1 Tax=Phytophthora ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004181Zinc finger, MIZ-typePFAMPF02891zf-MIZcoord: 146..196
e-value: 1.8E-15
score: 56.4
IPR004181Zinc finger, MIZ-typePROSITEPS51044ZF_SP_RINGcoord: 135..214
score: 36.331
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 79..239
e-value: 6.3E-34
score: 118.5
NoneNo IPR availablePANTHERPTHR10782ZINC FINGER MIZ DOMAIN-CONTAINING PROTEINcoord: 97..353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5786contigEcto-sp13_S_contig5786:2251..8277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5786.16225.1mRNA_Ecto-sp13_S_contig5786.16225.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5786 2251..8277 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5786.16225.1 ID=prot_Ecto-sp13_S_contig5786.16225.1|Name=mRNA_Ecto-sp13_S_contig5786.16225.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=671bp
VCSCLLFAFELDHGGQSSGRVAARGGVRQTIELLVLGDVRAVYSRHERVE
SRNVSKCGIPKCVCMYACVLFPQVVRLVGVEEVLKNVKQRSHLSKKEALR
RVKRSFKGCLDLNSHLEGDSSEDEQIGKGAGGDDSDDDLMATATRLSLRC
PLGLVPITCPGRGRYCRHLQCFDLNTFLSFNKDCAGAAWKCGVCNLPIKP
EDLVVDTYLDEVVRSLEEQGLTDDAEEVEIHQDGHWDPILEDQKAGKMSR
RDRKKAKDDAAGAGSGQNGGVVDGGECDTVDIDGDDVVTTGDNEAANGSA
TATAAAARVASPPPSAPDSAAAPAPAAAPAARSANEPEVFDLCSSDEDDE
LPAAPAPAPAAVGAPSSSAAAAAAAAAANFSSNGTNGTAAAAASGGSGGA
GGERRYGYSSLVQPKDSSGSGRAPSPPARAAAAGRCGSNGDGSNVGNVED
CSPSSPSCSSSRYGGETARGSSCPASAQVSDAWARAGGGIADLSIGSSSS
GGADGGRGVDWLSGGGAGAGGGRGRGGGQQHGECSAQQLSGGGGGGTPPT
RLWDSGSSFGTVRSGGGGGSTAVAAAGTAVIPGEKTAGQTPQPWYPGSSP
GSRQQRPPALHLGGGGGGLDSGGGAGGRARQGGYPRPIPSSSSSSSASSL
YSAILPAPGAAAAAAGGGAPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004181Znf_MIZ
IPR013083Znf_RING/FYVE/PHD