prot_Ecto-sp13_S_contig5779.16208.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5779.16208.1
Unique Nameprot_Ecto-sp13_S_contig5779.16208.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length107
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5779.16208.1 vs. uniprot
Match: D8LHH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHH7_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.660e-50
Identity = 72/75 (96.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:   31 MAGIGTGTLMGIHKFRVGRWPAPTNSEESTKTWNVKWQWLVPFTRAKHPSCDKVRTRAACSPQYCDSMVTPRASL 105
            MAGIGTGTLMGIHKFRVGRWPAPTNSEE+TKTWNVKWQWLVPFTRAKHPSCD+VRTRAACSPQYCD+MVTPRASL
Sbjct:    1 MAGIGTGTLMGIHKFRVGRWPAPTNSEENTKTWNVKWQWLVPFTRAKHPSCDRVRTRAACSPQYCDNMVTPRASL 75
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BLAST of mRNA_Ecto-sp13_S_contig5779.16208.1 vs. uniprot
Match: A0A6H5LAQ6_9PHAE (Cytochrome c oxidase assembly protein COX20, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAQ6_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.680e-23
Identity = 45/49 (91.84%), Postives = 46/49 (93.88%), Query Frame = 0 
Query:    1 MPFESWPEQLEWVKGNGASILKKPCVRNALMAGIGTGTLMGIHKFRVGR 49
            MP ESWPEQLE VK NGASILKKPCVRNALMAGIGTGTLMGIHKFRVG+
Sbjct:    1 MPSESWPEQLEGVKRNGASILKKPCVRNALMAGIGTGTLMGIHKFRVGK 49
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5779.16208.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHH7_ECTSI2.660e-5096.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LAQ6_9PHAE2.680e-2391.84Cytochrome c oxidase assembly protein COX20, mitoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5779contigEcto-sp13_S_contig5779:6111..7808 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5779.16208.1mRNA_Ecto-sp13_S_contig5779.16208.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5779 6111..7808 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5779.16208.1 ID=prot_Ecto-sp13_S_contig5779.16208.1|Name=mRNA_Ecto-sp13_S_contig5779.16208.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=107bp
MPFESWPEQLEWVKGNGASILKKPCVRNALMAGIGTGTLMGIHKFRVGRW
PAPTNSEESTKTWNVKWQWLVPFTRAKHPSCDKVRTRAACSPQYCDSMVT
PRASLL*
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