prot_Ecto-sp13_S_contig5774.16199.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5774.16199.1
Unique Nameprot_Ecto-sp13_S_contig5774.16199.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length321
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig5774.16199.1 vs. uniprot
Match: A0A6H5LER2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LER2_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 1.220e-111
Identity = 250/323 (77.40%), Postives = 257/323 (79.57%), Query Frame = 0 
Query:    1 VFQEEEAKREEMAEFQRAGEAALRAMQKEKEEALQRISAERKSKAAERQELLHRRFKEFEAEEAEFRIEARERDARLEAEKEQLAKDSSVADAAVAAGCGDTPGXXXXXXXXPEWASDKWILAGMNGGXXXXXDKLPVAEKPLVYVRDEKASAKAAAVARLLAGGVADASGASGGGEPLDKEEGTEPANTEASPMSEKASGVSKGAEAHLDVAVPTAMVEDGDETPPXXAAESATTLGEGPAEGSGDADGXXXXXXXXXXXXXXXXXPALAAVPAADDQCSGAKEPKGDSGPNGGVVSPAAADTDAD---AVAAVEPPSVAAL 320
            + QEEEAKR+EMA FQRAGEAALRAMQKEKEEALQRISAERK KAAER+ELLH+RFKEFEAEE E RIEARERDARLEAEKEQLAKDSSVA             XXXXXXXXPEWASDKWILAGMNGG      KLPVAE+P VYVRD+KA AKAAAVARLLAGGV DASGASGG EPLDKEEGTEPA+ EASPMSEKASGVSKGAEA  DVAVPTAMVEDGDETP XX                     XXXXXXXXXXXXXXXXX ALAAVPAADDQCSGAKEPKGD   NGGVVSPAAA    D   AV  VEPPSVAAL
Sbjct:  257 IAQEEEAKRQEMARFQRAGEAALRAMQKEKEEALQRISAERKCKAAERKELLHQRFKEFEAEETELRIEARERDARLEAEKEQLAKDSSVAXXXXXXXXXXXXXXXXXXXXXPEWASDKWILAGMNGGGGGGSAKLPVAERPPVYVRDQKADAKAAAVARLLAGGVVDASGASGGSEPLDKEEGTEPASAEASPMSEKASGVSKGAEAQEDVAVPTAMVEDGDETPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAAVPAADDQCSGAKEPKGDRRANGGVVSPAAAXXXXDXXXAVDTVEPPSVAAL 579
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5774.16199.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LER2_9PHAE1.220e-11177.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..87
NoneNo IPR availableCOILSCoilCoilcoord: 23..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5774contigEcto-sp13_S_contig5774:190..2168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5774.16199.1mRNA_Ecto-sp13_S_contig5774.16199.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5774 190..2168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5774.16199.1 ID=prot_Ecto-sp13_S_contig5774.16199.1|Name=mRNA_Ecto-sp13_S_contig5774.16199.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
VFQEEEAKREEMAEFQRAGEAALRAMQKEKEEALQRISAERKSKAAERQE
LLHRRFKEFEAEEAEFRIEARERDARLEAEKEQLAKDSSVADAAVAAGCG
DTPGGDGTGGDGPEWASDKWILAGMNGGGGGGGDKLPVAEKPLVYVRDEK
ASAKAAAVARLLAGGVADASGASGGGEPLDKEEGTEPANTEASPMSEKAS
GVSKGAEAHLDVAVPTAMVEDGDETPPPPAAESATTLGEGPAEGSGDADG
GGVVVPNDTDPEEEEEDPALAAVPAADDQCSGAKEPKGDSGPNGGVVSPA
AADTDADAVAAVEPPSVAAL*
back to top