prot_Ecto-sp13_S_contig5763.16186.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5763.16186.1
Unique Nameprot_Ecto-sp13_S_contig5763.16186.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length386
Homology
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: D8LPW4_ECTSI (Phosphatidate cytidylyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW4_ECTSI)

HSP 1 Score: 658 bits (1698), Expect = 5.400e-237
Identity = 362/386 (93.78%), Postives = 368/386 (95.34%), Query Frame = 0
Query:    1 MGLRERFLTAAVALPLALWAIFHDAWLCLSLVLVLQAVCVQEVGELLRRTRAARAIAATGVGVGLLGSTFLFHVIAETVSLITAFCGREAAGIAMCVGMALIVARRLVLMRDHWAASILSAGKPVGVXXXXXXXXXXXX-AGVMEAGVFLLALEISAMLWLVCGFSSLVAIRFRGSRGAADVAFLLAVVFNSDNGGLLAGSMYKVLRRKRPLHLSSSELLQRRQLSSGSQTPPAADGAADMTPGKKHLGLLTVASPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGLSPVDET 385
            MGLRERFLTAAVALPLALWAIFHDAWLCLSLVLVLQAVCVQEVGELLRRTRAARAIAATGVGV LLGSTFLFHVIAETVSLITAFCGR+AAGIAMCVGMALIVARRLVLMRDHW AS LSA KPVGV   XXXXXXXXX AGVMEAGVFLLALEISAMLW+VCG SSLVA+RFRGSRGAADV FLLAVVFNSDNGGLLAGSMYKVLRRKR LHLSSSELLQR Q SS SQTPPAA GAA+MTPG+KH GLLTVASPGKTWVGVTGSIALGTATALTLEQ LLFLLHEPLLS+VGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVL AAPLYLAVLTAFGLSPVDET
Sbjct:    1 MGLRERFLTAAVALPLALWAIFHDAWLCLSLVLVLQAVCVQEVGELLRRTRAARAIAATGVGVALLGSTFLFHVIAETVSLITAFCGRDAAGIAMCVGMALIVARRLVLMRDHWVASKLSAEKPVGVSGGXXXXXXXXXXAGVMEAGVFLLALEISAMLWMVCGCSSLVALRFRGSRGAADVVFLLAVVFNSDNGGLLAGSMYKVLRRKRQLHLSSSELLQRHQRSSASQTPPAAAGAAEMTPGQKHPGLLTVASPGKTWVGVTGSIALGTATALTLEQALLFLLHEPLLSRVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLTAAPLYLAVLTAFGLSPVDET 386          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: A0A1I0M6L1_9GAMM (Phosphatidate cytidylyltransferase n=2 Tax=unclassified Luteibacter TaxID=2620188 RepID=A0A1I0M6L1_9GAMM)

HSP 1 Score: 87.0 bits (214), Expect = 8.530e-16
Identity = 57/126 (45.24%), Postives = 68/126 (53.97%), Query Frame = 0
Query:  254 SPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGL 379
            SPGKTW GV G++A G   AL                 +G  L G  +       GG   G L V+G     V VVGDL+ESL+KR A VKDSG +FPGHGG LDRLD V AA P+++A     GL
Sbjct:  172 SPGKTWAGVYGAVAAGGLVAL-----------------LGGFLLGVRD-------GGQLVGLL-VLGVVTVAVAVVGDLFESLMKRHASVKDSGNIFPGHGGLLDRLDSVFAAIPVFVAGKLLLGL 272          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: UPI00131CC442 (phosphatidate cytidylyltransferase n=1 Tax=Rhodanobacter sp. L36 TaxID=1747221 RepID=UPI00131CC442)

HSP 1 Score: 86.7 bits (213), Expect = 1.170e-15
Identity = 53/126 (42.06%), Postives = 68/126 (53.97%), Query Frame = 0
Query:  254 SPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGL 379
            SPGKTW G  G++  GT         L+ LL   LL   G  L G                 L V+G+    + +VGDL ESL+KR AMVKDSG++FPGHGG +DR+D V AA P++ A L   G+
Sbjct:  173 SPGKTWAGAYGALVAGT---------LIALLGGWLLHVRGAQLLG-----------------LAVLGSLTVAISIVGDLIESLMKRHAMVKDSGSIFPGHGGLMDRMDSVFAALPIFAAGLLLLGV 272          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: A0A7X5QWV7_9GAMM (Phosphatidate cytidylyltransferase n=1 Tax=Luteibacter yeojuensis TaxID=345309 RepID=A0A7X5QWV7_9GAMM)

HSP 1 Score: 86.3 bits (212), Expect = 1.590e-15
Identity = 63/138 (45.65%), Postives = 76/138 (55.07%), Query Frame = 0
Query:  245 KHLGLLTVA---SPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGL 379
            +H G   +A   SPGKTW GV G+I  G+  AL                 +G  L G   RGG   VG +    LGVV  G+    VVGDL+ESL+KR A VKDSG++FPGHGG LDRLD V AA P++ A     GL
Sbjct:  160 RHFGRRKLAPRISPGKTWAGVYGAILAGSLVAL-----------------LGGYLLGV--RGGGQLVGLV---LLGVVTVGIA---VVGDLFESLMKRHAAVKDSGSLFPGHGGLLDRLDSVFAALPVFAAGKLLLGL 272          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: A0A4R3YKF2_9GAMM (Phosphatidate cytidylyltransferase n=1 Tax=Luteibacter rhizovicinus TaxID=242606 RepID=A0A4R3YKF2_9GAMM)

HSP 1 Score: 85.5 bits (210), Expect = 3.020e-15
Identity = 57/128 (44.53%), Postives = 68/128 (53.12%), Query Frame = 0
Query:  254 SPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVG--VVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGL 379
            SPGKTW GV G++  G  TA                  +G  L G  +          +   LG++G GL  V   VVGDL+ESLLKR A VKDSGT+FPGHGG LDRLD V AA P++ A     GL
Sbjct:  173 SPGKTWAGVYGALVAGAFTAW-----------------LGGWLLGVPD----------TDHMLGLIGLGLLTVAASVVGDLFESLLKRHADVKDSGTLFPGHGGLLDRLDSVFAALPVFAAGKLILGL 273          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: UPI00105F8798 (phosphatidate cytidylyltransferase n=1 Tax=Lysobacter segetis TaxID=2492394 RepID=UPI00105F8798)

HSP 1 Score: 85.1 bits (209), Expect = 4.440e-15
Identity = 56/138 (40.58%), Postives = 71/138 (51.45%), Query Frame = 0
Query:  245 KHLGLLTVA---SPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGL 379
            +HLG   +A   SP KTW G+ G + +GT  AL      L    +P        LP                 ++ V+ A   +V VVGDL+ESLLKR A  KDSGT+ PGHGG LDR+D VLAA P++      FGL
Sbjct:  167 RHLGKHKLAPRVSPNKTWEGLLGGVVVGTLVALAFS---LLADADP------RDLP-----------------KVAVIAAASILVSVVGDLFESLLKRHAGKKDSGTLIPGHGGALDRIDAVLAALPVFALGKALFGL 278          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: A0A0G9H874_9GAMM (Phosphatidate cytidylyltransferase n=4 Tax=Luteibacter TaxID=242605 RepID=A0A0G9H874_9GAMM)

HSP 1 Score: 84.7 bits (208), Expect = 5.530e-15
Identity = 54/126 (42.86%), Postives = 68/126 (53.97%), Query Frame = 0
Query:  254 SPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGL 379
            SPGKTW GV G+I  G+                  ++ +G  L G  E   +  +G      LGV+  G     VVGDL+ESL+KR A VKDSG++FPGHGG LDRLD V AA P++ A     GL
Sbjct:  172 SPGKTWAGVYGAIVAGS-----------------FITVLGGYLIGVRETSQLVGLG-----VLGVITVGFA---VVGDLFESLMKRHASVKDSGSLFPGHGGLLDRLDSVFAALPIFAAGKLLLGL 272          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: A0A1V9Z0J8_9STRA (Phosphatidate cytidylyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z0J8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.410e-15
Identity = 77/268 (28.73%), Postives = 103/268 (38.43%), Query Frame = 0
Query:  112 DHWAASILSAGKPVGVXXXXXXXXXXXXAGVMEAGVFLLALEISAMLWLVCGFSSLVAIRFRGSRGAADVAFL-LAVVFNSDNGGLLAGSMYKVLRRKRPLHLSSSELLQRRQLSSGSQTPPAADGAADMTPGKKHLGLLTVASPGKTWVGVTGSIALGTATAL---TLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLT 375
            D W    ++ G    V               + AG+  L L++ A+ ++V GF   + +R   +     +  + LA  +  D G L+AGS++                        GS              GK    LL   SPGKT  G  G I    AT L    L +    L   PL  +V                         V+G  + +  + GDL ES LKR A VKDSG  FPGHGGCLDR+D +L  APL   VLT
Sbjct:   87 DKWTHDAVATGVYFAVFSMHLLFAKFLPEPTLHAGLLSLILDLVALAYIVHGFGHAILVRQASATYGQGLQIMTLATSWICDTGALVAGSLF------------------------GS--------------GK----LLAAVSPGKTTAGGLGGIVFSVATVLGASLLPEAYACLPPLPLAQQV-------------------------VLGVAMGVACIAGDLVESYLKRVAQVKDSGVFFPGHGGCLDRMDSLLFVAPLMYYVLT 287          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: I4VZD4_9GAMM (Phosphatidate cytidylyltransferase n=3 Tax=Rhodanobacter TaxID=75309 RepID=I4VZD4_9GAMM)

HSP 1 Score: 84.0 bits (206), Expect = 1.010e-14
Identity = 54/126 (42.86%), Postives = 64/126 (50.79%), Query Frame = 0
Query:  254 SPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGL 379
            SPGKTW G  G++  GT  A+         +   LL   G SL G                 L V+        +VGDL ESL+KR A VKDSGT+FPGHGG LDRLD V AA P++ A L   GL
Sbjct:  172 SPGKTWAGAYGALVAGTLVAV---------IGGWLLDVRGTSLVG-----------------LAVLACLTVAASIVGDLIESLMKRHAKVKDSGTIFPGHGGLLDRLDSVFAALPVFAAGLWLLGL 271          
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Match: UPI00141E25F3 (phosphatidate cytidylyltransferase n=2 Tax=Luteibacter TaxID=242605 RepID=UPI00141E25F3)

HSP 1 Score: 84.0 bits (206), Expect = 1.030e-14
Identity = 59/138 (42.75%), Postives = 72/138 (52.17%), Query Frame = 0
Query:  245 KHLGLLTVA---SPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEEERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVFPGHGGCLDRLDGVLAAAPLYLAVLTAFGL 379
            +H G   +A   SPGKTW GV G+I  G   AL                 +G  L G  + G +  +       LGVV  G+    VVGDL+ESL+KR A VKDSG +FPGHGG LDRLD V AA P++ A     GL
Sbjct:  160 RHFGRRKLAPRISPGKTWAGVYGAIVAGGLMAL-----------------LGGYLIGVRDGGQLVGLL-----LLGVVTVGIA---VVGDLFESLMKRHATVKDSGNLFPGHGGLLDRLDSVFAALPVFAAGKLLLGL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5763.16186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPW4_ECTSI5.400e-23793.78Phosphatidate cytidylyltransferase n=2 Tax=Ectocar... [more]
A0A1I0M6L1_9GAMM8.530e-1645.24Phosphatidate cytidylyltransferase n=2 Tax=unclass... [more]
UPI00131CC4421.170e-1542.06phosphatidate cytidylyltransferase n=1 Tax=Rhodano... [more]
A0A7X5QWV7_9GAMM1.590e-1545.65Phosphatidate cytidylyltransferase n=1 Tax=Luteiba... [more]
A0A4R3YKF2_9GAMM3.020e-1544.53Phosphatidate cytidylyltransferase n=1 Tax=Luteiba... [more]
UPI00105F87984.440e-1540.58phosphatidate cytidylyltransferase n=1 Tax=Lysobac... [more]
A0A0G9H874_9GAMM5.530e-1542.86Phosphatidate cytidylyltransferase n=4 Tax=Luteiba... [more]
A0A1V9Z0J8_9STRA7.410e-1528.73Phosphatidate cytidylyltransferase n=1 Tax=Achlya ... [more]
I4VZD4_9GAMM1.010e-1442.86Phosphatidate cytidylyltransferase n=3 Tax=Rhodano... [more]
UPI00141E25F31.030e-1442.75phosphatidate cytidylyltransferase n=2 Tax=Luteiba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01148CTP_transf_1coord: 249..376
e-value: 2.8E-25
score: 89.6
coord: 5..203
e-value: 2.9E-6
score: 27.2
NoneNo IPR availablePANTHERPTHR46382FAMILY NOT NAMEDcoord: 3..377
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..205
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 206..385
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..104
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 90..109
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5763contigEcto-sp13_S_contig5763:2304..7700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5763.16186.1mRNA_Ecto-sp13_S_contig5763.16186.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5763 1970..7803 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5763.16186.1 ID=prot_Ecto-sp13_S_contig5763.16186.1|Name=mRNA_Ecto-sp13_S_contig5763.16186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=386bp
MGLRERFLTAAVALPLALWAIFHDAWLCLSLVLVLQAVCVQEVGELLRRT
RAARAIAATGVGVGLLGSTFLFHVIAETVSLITAFCGREAAGIAMCVGMA
LIVARRLVLMRDHWAASILSAGKPVGVGGGGGGGGEGDGAGVMEAGVFLL
ALEISAMLWLVCGFSSLVAIRFRGSRGAADVAFLLAVVFNSDNGGLLAGS
MYKVLRRKRPLHLSSSELLQRRQLSSGSQTPPAADGAADMTPGKKHLGLL
TVASPGKTWVGVTGSIALGTATALTLEQVLLFLLHEPLLSKVGESLPGEE
ERGGVFSVGGMSSGRLGVVGAGLCIVGVVGDLWESLLKRTAMVKDSGTVF
PGHGGCLDRLDGVLAAAPLYLAVLTAFGLSPVDET*
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