prot_Ecto-sp13_S_contig576.16180.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig576.16180.1
Unique Nameprot_Ecto-sp13_S_contig576.16180.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length122
Homology
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: D7G2W2_ECTSI (GroES chaperonin, plastidal n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2W2_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 1.050e-75
Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0
Query:    1 MRDTELLMAYEGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            MRDTELLMAYEGEEI LDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPT+GQVVKVG GRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW
Sbjct:  169 MRDTELLMAYEGEEITLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTVGQVVKVGPGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 289          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: A0A836CC47_9STRA (Chaperonin 10-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC47_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.100e-26
Identity = 50/121 (41.32%), Postives = 84/121 (69.42%), Query Frame = 0
Query:    1 MRDTELLMAYEGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            +R  + L+ YEG+  +  TA+M+GDR+L+++  V +   + A+GV++A  A R  + T+G+VVK+G GR+ P+G  +P+ C VGD +K++DFAAE + +E L+ D  + V I+N D++AKW
Sbjct:   89 LRGDDCLLTYEGDAPSAATAQMVGDRILVRI--VRELERTKASGVVVAAVAAREQKETMGEVVKMGPGRIAPNGKPLPLQCAVGDQIKFRDFAAEWVAMETLKVDGEDFVVIKNTDVIAKW 207          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: A0A7S2XVL1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XVL1_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.430e-17
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 0
Query:    1 MRDTELLMAYEGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            +RD ++++ + GE + LD+  + G+ VL+ VK+       SA+G+LIA    R ++P+ G++VKVG G+M  +G +M M  EVG  VK++DFA   I+I+G E        +R  D+LAK+
Sbjct:  133 IRDDDIMVKFTGE-LTLDSVEVTGENVLIAVKS--SDDEESASGLLIAAQTKRGSKPSTGEIVKVGPGKMASNGKLMDMDVEVGAMVKFRDFAGNEIKIDGKE-----FAVVRYTDLLAKF 245          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: A0A448Z345_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z345_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 2.530e-17
Identity = 46/121 (38.02%), Postives = 76/121 (62.81%), Query Frame = 0
Query:    1 MRDTELLMAYEGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            +RD ++L+ +EG+E+ LD+   + D VL+ V+     T     G+L+A S+   +RP+ G+VVKVG GR   +G  M M  E GD +K++D+A   ++IEG   +++ +V  R +DILAK+
Sbjct:  127 IRDDDVLVRFEGDELTLDSCSTIQDAVLVYVETKEVATEG---GILLAASSKTESRPSTGKVVKVGPGRCATNGERMEMEIEEGDFIKFRDYAGNEVEIEG---EDYTVV--RALDILAKF 239          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: W7TNB8_9STRA (20 kDa chaperonin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNB8_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 3.200e-17
Identity = 49/121 (40.50%), Postives = 77/121 (63.64%), Query Frame = 0
Query:    1 MRDTELLMAYEGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            +RD ++L+ + G  + LD    + DR+L++VK   K    SA G+L+A S T++ RPT G+V+KVG GR+  +G +  +  + GD VK+KDFA   I+I+    DE  LV + +VD+LA+W
Sbjct:  142 IRDDDILLTWTGSSMTLDAVETVRDRILVKVK---KAQEKSAGGILLAPSMTKA-RPTEGEVIKVGPGRIASTGEVADVKVKPGDGVKFKDFAGTEIKIQ----DENYLV-MYSVDVLARW 253          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: B8CCQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCQ7_THAPS)

HSP 1 Score: 82.4 bits (202), Expect = 9.950e-17
Identity = 48/121 (39.67%), Postives = 79/121 (65.29%), Query Frame = 0
Query:    1 MRDTELLMAYEGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            +RD ++L+ ++G+ + LD   ++ D VL++V    + TS    G+LIA ++ + ++P+ G+VVKVG GRM  +G +M +   VGD VK++DFA   +QIEG   +E+ +V  R  DILAK+
Sbjct:  129 IRDDDILVKFDGK-LTLDNVDVVSDNVLVKVNDDQEATSG---GLLIAATSKKGSKPSTGEVVKVGPGRMASNGEIMTVDISVGDEVKFRDFAGNEVQIEG---EEYAVV--RMTDILAKF 240          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: A0A8J2WID0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WID0_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.030e-14
Identity = 42/122 (34.43%), Postives = 71/122 (58.20%), Query Frame = 0
Query:    1 MRDTELLMAYEGE-EINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            ++D ++L+++ G+  + L   + + D VL+QV  V + T+S   G+ +A   +  TR T G VVK G GR+   G  +P+  EVG+ VK+KD+A   I+++G +      + +R  D LAKW
Sbjct:  125 IKDDDILLSWAGDASMTLGEVKCVADNVLVQVTKVEEETAS---GIALAAGVSEQTRTTSGVVVKTGTGRVAADGASVPVPVEVGESVKFKDYAGADIRLDGED-----YIVVRVPDCLAKW 238          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: A0A7S3PW88_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW88_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 2.320e-13
Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 0
Query:    1 MRDTELLMAYEGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            +RD ++L+ + G  + +D+   + D +L+ V+   +  +S   G+L+A +   S RPT G V KVG GRM  SG ++PM  EVGD VK+ DFA   ++I      + E   ++  +I AK+
Sbjct:  129 IRDNDILVKFTGGSLTVDSVEAVNDGILVYVETREQEETSG--GLLLASTNDNSRRPTTGVVTKVGPGRMAESGDLIPMSVEVGDQVKFMDFAGNEVKI-----GDKEYSVVQMTEIYAKF 242          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: A0A6S8Y9J4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8Y9J4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.370e-13
Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 0
Query:    1 MRDTELLMAY-EGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTR--PTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            +RD ++++ Y +G+++ L+ A M+ D VL+ +        S++ G+LIA +A +  R     G VVKVG G+MV  G ++ M  EVGD VK++DFA   + I G   +E+ +V +   DILAK+
Sbjct:  140 IRDVDIMVRYTDGDKLTLENAEMVFDNVLVHIVEE----ESTSGGLLIASTANKEDRGRQCTGTVVKVGPGKMVADGSILDMNVEVGDKVKFRDFAGNEVTIGG---EEYSVVAMT--DILAKF 254          
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Match: A0A7S1ZS72_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZS72_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 8.120e-13
Identity = 46/124 (37.10%), Postives = 75/124 (60.48%), Query Frame = 0
Query:    1 MRDTELLMAY-EGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAESATRSTR--PTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIEGLETDEFELVCIRNVDILAKW 121
            +RD ++++ Y +G+++ L+ A M+ D VL+ +        S++ G+LIA +A +  R     G VVKVG G+MV  G ++ M  EVGD VK++DFA   + I G   +E+ +V +   DILAK+
Sbjct:  148 IRDVDIMVRYTDGDKLTLENAEMVFDNVLVHIVEE----ESTSGGLLIASTANKEDRGRQCTGTVVKVGPGKMVADGSILDMNVEVGDKVKFRDFAGNEVTIGG---EEYSVVAMT--DILAKF 262          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig576.16180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2W2_ECTSI1.050e-7597.52GroES chaperonin, plastidal n=2 Tax=Ectocarpus Tax... [more]
A0A836CC47_9STRA1.100e-2641.32Chaperonin 10-like protein (Fragment) n=1 Tax=Trib... [more]
A0A7S2XVL1_9STRA1.430e-1738.02Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A448Z345_9STRA2.530e-1738.02Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
W7TNB8_9STRA3.200e-1740.5020 kDa chaperonin n=2 Tax=Monodopsidaceae TaxID=42... [more]
B8CCQ7_THAPS9.950e-1739.67Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A8J2WID0_9STRA3.030e-1434.43Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3PW88_9STRA2.320e-1334.71Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A6S8Y9J4_9STRA7.370e-1337.10Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S1ZS72_9STRA8.120e-1337.10Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 20..35
score: 32.88
coord: 47..68
score: 32.48
coord: 82..94
score: 31.01
coord: 108..121
score: 31.25
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 19..121
e-value: 2.6E-5
score: 23.6
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 20..120
e-value: 4.0E-14
score: 52.4
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 21..120
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40coord: 19..121
e-value: 5.4E-17
score: 63.6
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 21..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig576contigEcto-sp13_S_contig576:45..3356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig576.16180.1mRNA_Ecto-sp13_S_contig576.16180.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig576 26..3779 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig576.16180.1 ID=prot_Ecto-sp13_S_contig576.16180.1|Name=mRNA_Ecto-sp13_S_contig576.16180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=122bp
MRDTELLMAYEGEEINLDTARMLGDRVLLQVKAVPKGTSSSAAGVLIAES
ATRSTRPTIGQVVKVGAGRMVPSGLMMPMYCEVGDCVKYKDFAAEVIQIE
GLETDEFELVCIRNVDILAKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR037124Chaperonin_GroES_sf
IPR011032GroES-like_sf