prot_Ecto-sp13_S_contig57576.16175.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57576.16175.1
Unique Nameprot_Ecto-sp13_S_contig57576.16175.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length79
Homology
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BLAST of mRNA_Ecto-sp13_S_contig57576.16175.1 vs. uniprot
Match: A0A6H5L0L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L3_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 2.610e-7
Identity = 34/87 (39.08%), Postives = 45/87 (51.72%), Query Frame = 0 
Query:    3 RRLSVCLAAARLGRLDLLKCARAHGCPWD-VVVADEIALRG-YAEMLRWARS---------VEVDPCPWNAGTCDLAAEGGHMQLVR 78
            RR S+C AAAR GRLDLL+ A+   C W     A ++A  G +A +L+W RS         V  + CPW+   C  AA  G   +V 
Sbjct:   58 RRTSICNAAARFGRLDLLELAQESACGWTPATYACQLAALGCHARVLKWLRSPTENWPTGRVAPNACPWDECACADAALAGRHDVVE 144
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57576.16175.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L0L3_9PHAE2.610e-739.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 7..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57576contigEcto-sp13_S_contig57576:38..274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57576.16175.1mRNA_Ecto-sp13_S_contig57576.16175.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57576 38..274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57576.16175.1 ID=prot_Ecto-sp13_S_contig57576.16175.1|Name=mRNA_Ecto-sp13_S_contig57576.16175.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=79bp
LDRRLSVCLAAARLGRLDLLKCARAHGCPWDVVVADEIALRGYAEMLRWA
RSVEVDPCPWNAGTCDLAAEGGHMQLVR*
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