prot_Ecto-sp13_S_contig57496.16161.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57496.16161.1
Unique Nameprot_Ecto-sp13_S_contig57496.16161.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length68
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57496.16161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13637Ank_4coord: 3..64
e-value: 1.2E-8
score: 35.3
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..68
e-value: 7.0E-14
score: 53.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..68
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..23
score: 8.79
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 43..68
score: 8.763
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..68
score: 11.639

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57496contigEcto-sp13_S_contig57496:589..792 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57496.16161.1mRNA_Ecto-sp13_S_contig57496.16161.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57496 589..792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57496.16161.1 ID=prot_Ecto-sp13_S_contig57496.16161.1|Name=mRNA_Ecto-sp13_S_contig57496.16161.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
SGNSLLHVAAAHGHTACVEVLLSGAWLQRGDSVPLNVDARNTAGRTALFN
AAMNAFVDVTAFLLDVGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom