prot_Ecto-sp13_S_contig5739.16148.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5739.16148.1
Unique Nameprot_Ecto-sp13_S_contig5739.16148.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length112
Homology
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.130e-26
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0
Query:   34 GGPVPRELRRLLDVLHRCGDPEWRFGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            GG  PR+L RLLDVL R  + E    L DNPWAEPPESIVAKG K+I+ YFEDLYAEP +V+RSSVK+ILVGQEGAGKT
Sbjct:  273 GGSFPRQLCRLLDVLDRA-EREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKT 350          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 1.130e-26
Identity = 58/79 (73.42%), Postives = 62/79 (78.48%), Query Frame = 0
Query:   34 GGPVPRELRRLLDVLHRCGDPEWRFGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            GG +P +L RLLDVL R         L DNPWAEPPESIVAKGPKSI+ YFEDLYAEP +V RSSVKVILVGQEGAGKT
Sbjct:  203 GGRIPSQLCRLLDVLDRAEGGV--LSLEDNPWAEPPESIVAKGPKSIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKT 279          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.520e-25
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   34 GGPVPRELRRLLDVLHRCGDPEWRFGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            GG +P +L RLLDVL     P    GL  NPW EPPES+VAKGPKSI+ YFEDLYAEP ++ RSSVKV+LVGQEGAGKT
Sbjct:  345 GGTMPSQLCRLLDVLDPV--PSRYVGLGGNPWTEPPESVVAKGPKSIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKT 421          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: A0A6H5KTL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL4_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 4.990e-25
Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 0
Query:   37 VPRELRRLLDVLHRCGDPEWRF---GLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            +P +L RLLDVL    D   R    GLS NPWAEPPESIV KG ++I+ YFEDLYAEP +++RSSVKV+LVGQEGAGKT
Sbjct:    1 MPSQLCRLLDVL----DSSVRLIAVGLSGNPWAEPPESIVVKGLENIRGYFEDLYAEPCRIKRSSVKVVLVGQEGAGKT 75          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: A0A6H5JT71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT71_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 8.080e-25
Identity = 52/79 (65.82%), Postives = 60/79 (75.95%), Query Frame = 0
Query:   34 GGPVPRELRRLLDVLHRCGDPEWRFGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            GG +P +LRRLLDVL        R  L  NPW EPPESIV KG K+I+ YFEDLYAEP +++RSSVKV+LVGQEGAGKT
Sbjct:   91 GGAMPSQLRRLLDVLDSSVGSHARR-LGGNPWTEPPESIVVKGLKNIRGYFEDLYAEPCRIKRSSVKVVLVGQEGAGKT 168          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 4.080e-24
Identity = 54/79 (68.35%), Postives = 60/79 (75.95%), Query Frame = 0
Query:   34 GGPVPRELRRLLDVLHRCGDPEWRFGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            GG +P +L RLL VL R         L  NPWAEPPESIVAKGPKSI+ YFEDLYAEP  ++RSSVKV+LVGQEGAGKT
Sbjct:   62 GGAMPSQLCRLLVVLDRLSGVN--LALLGNPWAEPPESIVAKGPKSIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKT 138          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 7.640e-24
Identity = 53/81 (65.43%), Postives = 61/81 (75.31%), Query Frame = 0
Query:   32 TGGGPVPRELRRLLDVLHRCGDPEWRFGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            T GG +P +L RLLDVL R        GL DNPWAEPP SIV+KGP SI+ YFEDLY E  +V+R+SVK+ILVGQEGAGKT
Sbjct:  173 TLGGQLPSQLCRLLDVLDRATG--GILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKT 251          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 3.580e-23
Identity = 49/80 (61.25%), Postives = 61/80 (76.25%), Query Frame = 0
Query:   34 GGPVPRELRRLLDVLHRCGDPEWR-FGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            GGP+P +L RLLDVL      +++   L  NPW EPPE IV KGPK+++ YFEDLYAEP +++RS VKV+LVGQEGAGKT
Sbjct:  128 GGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKT 207          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 6.770e-23
Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 0
Query:   34 GGPVPRELRRLLDVLHRC---GDPEWRFG----LSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            GGP+P +L RLLD+       G  +   G    LS+NPWAEPPESIVAKGPKSI+ YFEDLYAE  +++R  VKV+LVGQEGAGKT
Sbjct:  273 GGPMPSQLCRLLDIFDSVEAQGLNDTGIGPSLSLSENPWAEPPESIVAKGPKSIRGYFEDLYAEHCRIKRRGVKVVLVGQEGAGKT 358          
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Match: A0A6H5K516_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K516_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.670e-22
Identity = 50/76 (65.79%), Postives = 58/76 (76.32%), Query Frame = 0
Query:   37 VPRELRRLLDVLHRCGDPEWRFGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVKVILVGQEGAGKT 112
            +P +LRRL DVL       W F L  NPWAEPPESIV KG K+ + YFEDLYAEP +++RSSVKV+LVGQEGAGKT
Sbjct:    1 MPSQLRRLPDVLDSSVGSNW-FRLGGNPWAEPPESIVDKGLKNTRGYFEDLYAEPCRIKRSSVKVVLVGQEGAGKT 75          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5739.16148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
D7FUD0_ECTSI1.130e-2672.15LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUC3_ECTSI1.130e-2673.42LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LF46_ECTSI2.520e-2568.35LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KTL4_9PHAE4.990e-2565.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT71_9PHAE8.080e-2565.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZA1_ECTSI4.080e-2468.35LRR-GTPase of the ROCO family, incomplete sequence... [more]
D7FUC9_ECTSI7.640e-2465.43LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KSZ8_9PHAE3.580e-2361.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJS7_ECTSI6.770e-2361.63LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K516_9PHAE1.670e-2265.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.2190coord: 72..101
e-value: 3.1E-5
score: 25.9
NoneNo IPR availableGENE3D3.40.50.300coord: 102..112
e-value: 3.1E-5
score: 25.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5739contigEcto-sp13_S_contig5739:4958..5293 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5739.16148.1mRNA_Ecto-sp13_S_contig5739.16148.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5739 4958..5295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5739.16148.1 ID=prot_Ecto-sp13_S_contig5739.16148.1|Name=mRNA_Ecto-sp13_S_contig5739.16148.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
RCKIELVPHLVTTAGWSDGFQPCNNLISLMCTGGGPVPRELRRLLDVLHR
CGDPEWRFGLSDNPWAEPPESIVAKGPKSIKEYFEDLYAEPGQVRRSSVK
VILVGQEGAGKT
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