prot_Ecto-sp13_S_contig57276.16132.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig57276.16132.1
Unique Nameprot_Ecto-sp13_S_contig57276.16132.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length83
Homology
BLAST of mRNA_Ecto-sp13_S_contig57276.16132.1 vs. uniprot
Match: D7G396_ECTSI (Fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G396_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 4.710e-41
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0
Query:    1 MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFKVRE-VGS---FSAFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLHNR 83
            MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFK ++  GS    +AFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLHNR
Sbjct:  204 MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFKQKDGFGSPDAIAAFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLHNR 290          
BLAST of mRNA_Ecto-sp13_S_contig57276.16132.1 vs. uniprot
Match: A0A6H5KXC7_9PHAE (Fucosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC7_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 9.380e-40
Identity = 77/87 (88.51%), Postives = 80/87 (91.95%), Query Frame = 0
Query:    1 MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFKVRE-VGS---FSAFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLHNR 83
            MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFK ++  GS    +AFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLHNR
Sbjct:  500 MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFKQKDGFGSPDAIAAFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLHNR 586          
BLAST of mRNA_Ecto-sp13_S_contig57276.16132.1 vs. uniprot
Match: A0A0G4GV21_VITBC (Fucosyltransferase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GV21_VITBC)

HSP 1 Score: 52.8 bits (125), Expect = 4.410e-6
Identity = 33/81 (40.74%), Postives = 46/81 (56.79%), Query Frame = 0
Query:    1 MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFKVREVGSFSAFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLH 81
            +++FDL MT + NSDVP  Y+G S+   +   P+       V   SA +SNC+      R  YM+ELM+H  V SFG C+H
Sbjct:  305 LNRFDLKMTVQLNSDVPRIYLGWSAYD-WLAPPRPKTGKHLV---SALISNCR--DNNGRLRYMQELMRHIPVASFGKCVH 379          
BLAST of mRNA_Ecto-sp13_S_contig57276.16132.1 vs. uniprot
Match: A0A1Y2CAF6_9FUNG (Fucosyltransferase n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2CAF6_9FUNG)

HSP 1 Score: 51.2 bits (121), Expect = 1.530e-5
Identity = 31/85 (36.47%), Postives = 45/85 (52.94%), Query Frame = 0
Query:    4 FDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFKVREVGS-----FSAFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLHNR 83
            FD  + Y  +SDVP+ Y     T  +FK  K +  V E G       + F+SNC A    +R  +++ELM+H  + SFG C HN+
Sbjct:  304 FDYFIDYRLDSDVPIPY-----TYTFFKFDKPALPVNEKGKGGRGVAAVFISNCFA--NNDRLEFLDELMEHMKIDSFGMCSHNK 381          
BLAST of mRNA_Ecto-sp13_S_contig57276.16132.1 vs. uniprot
Match: A0A7S1IXB7_9EUGL (Fucosyltransferase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IXB7_9EUGL)

HSP 1 Score: 49.7 bits (117), Expect = 5.000e-5
Identity = 31/83 (37.35%), Postives = 44/83 (53.01%), Query Frame = 0
Query:    1 MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFKVREVGSFSAFVSNCKAAGATNRFAYMEELMKHATVHSFGYCLHNR 83
            +S F++S+ Y R+S+VP+ +    S  R F  P  + K  +         NC   G  NR  Y+E LMKH  +HS+G CLH R
Sbjct:  182 ISLFNISVGYRRDSNVPMLF--GPSLVRTFDPPLPTSKKVKGAPVIWVAHNC--IGFNNRHKYVEALMKHVNIHSYGDCLHTR 260          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig57276.16132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G396_ECTSI4.710e-4188.51Fucosyltransferase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KXC7_9PHAE9.380e-4088.51Fucosyltransferase n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A0G4GV21_VITBC4.410e-640.74Fucosyltransferase n=2 Tax=Vitrella brassicaformis... [more]
A0A1Y2CAF6_9FUNG1.530e-536.47Fucosyltransferase n=1 Tax=Neocallimastix californ... [more]
A0A7S1IXB7_9EUGL5.000e-537.35Fucosyltransferase (Fragment) n=1 Tax=Eutreptiella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001503Glycosyl transferase family 10PANTHERPTHR11929ALPHA- 1,3 -FUCOSYLTRANSFERASEcoord: 2..79
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 2..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig57276contigEcto-sp13_S_contig57276:112..707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig57276.16132.1mRNA_Ecto-sp13_S_contig57276.16132.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig57276 112..707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig57276.16132.1 ID=prot_Ecto-sp13_S_contig57276.16132.1|Name=mRNA_Ecto-sp13_S_contig57276.16132.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=83bp
MSKFDLSMTYERNSDVPLGYVGSSSTSRYFKAPKASFKVREVGSFSAFVS
NCKAAGATNRFAYMEELMKHATVHSFGYCLHNR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001503Glyco_trans_10