prot_Ecto-sp13_S_contig5725.16129.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5725.16129.1
Unique Nameprot_Ecto-sp13_S_contig5725.16129.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length480
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5725.16129.1 vs. uniprot
Match: A0A6H5J6X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6X1_9PHAE)

HSP 1 Score: 580 bits (1496), Expect = 3.180e-200
Identity = 390/477 (81.76%), Postives = 405/477 (84.91%), Query Frame = 0 
Query:    1 SAQQAAEKRQRQQGIMGXXXQRLGGVSGSSPSDAVSAAQRAAAAAKWRHAVSQGCGGHHDRTAGEKADDNADDGDHWECGLCTLFNSLTVSACDACGKERSATASGNSIRDRGAGSXXXXXXXXXXXAGVSTTGREKRPAPTTGPAXXXXXXXXXXXAAGVGRLQKKSTAGARMASDGRSVGAPRGXXXXXXXXXXXXXXXXLPSAGRTWTCRSCPFLFPNASERRTCESCGAARLLPADAGSXXXXXXXXXXXXXXAATAVGGTTGGHTGWGANLLPSWTCEACTVVNPGMFLGCSVCGAERPAEEAXXXXXXXXXXXXXXL--ATLSSEWTAEVGRGXXXXVTAGGGWMGVQGSSGGTDCSGGVGGAAVGETVGVGGRTRNDPGMERCWLAQPAGEAQVCRLCTLRNPPEASDCEACGIPLGESEAAVAATASGGETAAGXXXXXXXXXXXXXXXXXXXATAEGEESSSHRPGAT 475
            +A +AAEKRQRQQGIMG   QRLGGVSGSSPSDA+SAAQRAAAAA+WRHAVSQGC GHH  TAG KADD+ADDGDHWECGLCTLFNSLTV+ACDACGKERSAT +G S+R RG   XXXXXXXXXX AG +TTGR+KRPAPTTG A            AG GRLQ KSTAGARMASDGRSVGAPRG XXXXXXXXXXX    LPSAGRTWTCRSCPF FPN SERRTCESCGAARLLPADAGS XXXXXXXXX    AATAVGGTTGGHT WGA LLPSWTCEACTVVNPGMFLGCSVCGAERPA+EA    XXXXXXXXXX   ATLSSEWTAEVG  XXXX     GWM  QGSSGGTDCS GVGGAAVGETVG GGRTR+DPGME CW AQP GE +VCRLCTLRNPPEAS+C+ACGIPL ESEAAVAATASGGETAA  XXXXXXXXXXXXXXXXXXAT EGEESSSHR GAT
Sbjct:  200 AALKAAEKRQRQQGIMGSGGQRLGGVSGSSPSDAISAAQRAAAAAQWRHAVSQGCRGHHGCTAGVKADDDADDGDHWECGLCTLFNSLTVNACDACGKERSATPAGKSVRGRGXXXXXXXXXXXXXVAGGTTTGRQKRPAPTTGAA------------AGAGRLQNKSTAGARMASDGRSVGAPRGGXXXXXXXXXXXR---LPSAGRTWTCRSCPFSFPNVSERRTCESCGAARLLPADAGSGXXXXXXXXX----AATAVGGTTGGHTSWGAELLPSWTCEACTVVNPGMFLGCSVCGAERPADEAAEAGXXXXXXXXXXXXXATLSSEWTAEVGXXXXXXXXXXXGWMAAQGSSGGTDCSVGVGGAAVGETVGFGGRTRDDPGMESCWSAQPTGETRVCRLCTLRNPPEASNCKACGIPLAESEAAVAATASGGETAADAXXXXXXXXXXXXXXXXXXATVEGEESSSHRLGAT 657
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BLAST of mRNA_Ecto-sp13_S_contig5725.16129.1 vs. uniprot
Match: D7FMC5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC5_ECTSI)

HSP 1 Score: 474 bits (1220), Expect = 2.450e-159
Identity = 349/460 (75.87%), Postives = 359/460 (78.04%), Query Frame = 0 
Query:   21 QRLGGVSGSSPSDAVSAAQRAAAAAKWRHAVSQGCGGHHDRTAGEKADDNADDGDHWECGLCTLFNSLTVSACDACGKERSATASGNSIRDRGAGSXXXXXXXXXXXAGVSTTGREKRPAPTTGPAXXXXXXXXXXXAAGVGRLQKKSTAGARMASDGRSVGAPRGXXXXXXXXXXXXXXXXLPSAGRTWTCRSCPFLFPNASERRTCESCGAARLLPADAGSXXXXXXXXXXXXXXAATAVGGTTGGHTGWGANLLPSWTCEACTVVNPGMFLGCSVCGAERPAEEAXXXXXXXXXXXXXXLATLSSEWTAEVGRGXXXXVTAGGGWMGVQGSSGGTDCSGGVGGAAVGETVGVGGRTRNDPGMERCWLAQPAGEAQVCRLCTLRNPPEASDCEACGIPLGESEAAVAATASGGETAAGXXXXXXXXXXXXXXXXXXXATAEGEESSSHRPGATAAAAA 480
            QRLGGVSGS                     VSQGCGGHH  TAGEK  DNADDGDHWECGLCTLFNSLTV+ACDACGKERSA   GNS+RDRGAGS     XXXXXX                   XXXXXXXXXXX  G GRLQKKSTAGAR ASDGRSVGAPRGXXXXXXXXXXX     LPSAGRTWTCRSCPF FPNASERRTCESCGAARLLPADAGS XXXXXXXXX     ATA+ GTTGGHT W A LLPSWTC+ACTVVNPGMFLGCSVCGAERPAEEAXXXXXXXXXXX   LATLSSEWTAEVGRG    VTAGG WM  QGSSGGTDCS GVG A V ETVG+GGR R+DPGME    AQPAGEA++CRLCTLRNPPEASDCEACGIPL +SEAAVAATASGGETAAG  XXXXXXXXXXXXX    AT +GE  SSHRPGATAAAAA
Sbjct:  175 QRLGGVSGSXXXXXXXXXXXXXXXXXXXXXVSQGCGGHHGCTAGEKTGDNADDGDHWECGLCTLFNSLTVNACDACGKERSANPPGNSVRDRGAGSSTGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GPGRLQKKSTAGARTASDGRSVGAPRGXXXXXXXXXXXG----LPSAGRTWTCRSCPFSFPNASERRTCESCGAARLLPADAGSGXXXXXXXXX-----ATAIRGTTGGHTSWDAELLPSWTCDACTVVNPGMFLGCSVCGAERPAEEAXXXXXXXXXXXN--LATLSSEWTAEVGRGGG--VTAGG-WMAAQGSSGGTDCSVGVGTADVRETVGIGGRIRDDPGMESWGSAQPAGEARMCRLCTLRNPPEASDCEACGIPLADSEAAVAATASGGETAAGAQXXXXXXXXXXXXX----ATGQGEGGSSHRPGATAAAAA 614
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5725.16129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J6X1_9PHAE3.180e-20081.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMC5_ECTSI2.450e-15975.87Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 396..420
e-value: 0.52
score: 14.1
coord: 278..302
e-value: 0.048
score: 22.3
coord: 208..234
e-value: 3.4
score: 7.7
coord: 75..99
e-value: 0.025
score: 23.7
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 279..304
e-value: 4.0E-4
score: 19.6
coord: 206..235
e-value: 0.0018
score: 17.6
coord: 75..97
e-value: 5.2E-5
score: 22.5
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 280..299
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 77..96
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 72..102
score: 8.705
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 273..305
score: 8.343
NoneNo IPR availableGENE3D2.20.28.140coord: 274..314
e-value: 2.2E-7
score: 32.5
coord: 72..111
e-value: 1.6E-6
score: 29.8
NoneNo IPR availablePANTHERPTHR46622FAMILY NOT NAMEDcoord: 278..418
coord: 61..307
coord: 2..71
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 73..100
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 279..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5725contigEcto-sp13_S_contig5725:6125..8307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5725.16129.1mRNA_Ecto-sp13_S_contig5725.16129.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5725 6125..8307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5725.16129.1 ID=prot_Ecto-sp13_S_contig5725.16129.1|Name=mRNA_Ecto-sp13_S_contig5725.16129.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=480bp
SAQQAAEKRQRQQGIMGGGGQRLGGVSGSSPSDAVSAAQRAAAAAKWRHA
VSQGCGGHHDRTAGEKADDNADDGDHWECGLCTLFNSLTVSACDACGKER
SATASGNSIRDRGAGSSTGGRGGGSSVAGVSTTGREKRPAPTTGPAAAAA
AAAAAAMAAGVGRLQKKSTAGARMASDGRSVGAPRGGGGGVGTTGGGGGG
GGLPSAGRTWTCRSCPFLFPNASERRTCESCGAARLLPADAGSGSGGGGR
GGGGGDGAATAVGGTTGGHTGWGANLLPSWTCEACTVVNPGMFLGCSVCG
AERPAEEAAAGGGGGGGDDDDNLATLSSEWTAEVGRGGGGGVTAGGGWMG
VQGSSGGTDCSGGVGGAAVGETVGVGGRTRNDPGMERCWLAQPAGEAQVC
RLCTLRNPPEASDCEACGIPLGESEAAVAATASGGETAAGAQGATGVGGV
GGSRASRASATAEGEESSSHRPGATAAAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf