prot_Ecto-sp13_S_contig5725.16128.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5725.16128.1
Unique Nameprot_Ecto-sp13_S_contig5725.16128.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length91
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5725.16128.1 vs. uniprot
Match: D7FMC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC6_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 1.360e-47
Identity = 88/90 (97.78%), Postives = 88/90 (97.78%), Query Frame = 0 
Query:    1 MIATTDSLARTQDDLLATSRGLLEAELRLHDTARQADAIEARADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSELCL 90
            MIATTD LARTQDDLLATSRGLLE ELRLHDTARQADAIEARADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSELCL
Sbjct:   29 MIATTDRLARTQDDLLATSRGLLE-ELRLHDTARQADAIEARADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSELCL 117
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BLAST of mRNA_Ecto-sp13_S_contig5725.16128.1 vs. uniprot
Match: A0A6H5J974_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J974_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 9.280e-47
Identity = 86/90 (95.56%), Postives = 88/90 (97.78%), Query Frame = 0 
Query:    1 MIATTDSLARTQDDLLATSRGLLEAELRLHDTARQADAIEARADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSELCL 90
            MIATTDSLA+TQDDLLATSRGLLE ELRLHDTARQADAIE RADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVS+LCL
Sbjct:   23 MIATTDSLAQTQDDLLATSRGLLE-ELRLHDTARQADAIETRADKIRQTCAALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSDLCL 111
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5725.16128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMC6_ECTSI1.360e-4797.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J974_9PHAE9.280e-4795.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5725contigEcto-sp13_S_contig5725:1473..3225 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5725.16128.1mRNA_Ecto-sp13_S_contig5725.16128.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5725 1434..3854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5725.16128.1 ID=prot_Ecto-sp13_S_contig5725.16128.1|Name=mRNA_Ecto-sp13_S_contig5725.16128.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=91bp
MIATTDSLARTQDDLLATSRGLLEAELRLHDTARQADAIEARADKIRQTC
AALERVTDRLAALRRRAQVLEAELEADGCVAGDGVSELCL*
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