prot_Ecto-sp13_S_contig572.16120.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig572.16120.1
Unique Nameprot_Ecto-sp13_S_contig572.16120.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1047
Homology
BLAST of mRNA_Ecto-sp13_S_contig572.16120.1 vs. uniprot
Match: A0A6H5KF31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF31_9PHAE)

HSP 1 Score: 773 bits (1997), Expect = 2.790e-267
Identity = 545/695 (78.42%), Postives = 573/695 (82.45%), Query Frame = 0
Query:  274 MSELSELRTLFETTREIVSDQTKGLNQVSTATNELREELQGTHSLAKAASGSSSKVLNVLETTIPAAFLSLETRLSRVEETVAAAAEXXXXXXXXXXXXXXXXXXXXXXXXALARRYDESVVGNDCRERRPLADSVSDGLSRKGARSPSTDDRQLYPAPQQQYHQXXXXXXXXXXXXXXXXRXXXXXXXXRWWXXXXXXXXXXXXXXXXXXXXXXXX-----PPEFLQGPIMSGRAQEGSTRGSRKRKNEDQQLENQEPPSRRVLQQDGTDRVTNEQPNIPQALQGVDHDTQDGESSWQGADESLRWTQPWGGEPGPATAAAAGASSQVGQSPRHDPEIPGGVLEQRNSCHGGSGGEREELFSPSARDASSSFASSAVQHNNRNSQRVADDAEVDMPSSSLPLFEADSFNPFQDADLVHITTGSIGAKAPGSVSTSRRQGSRSPPAPNTFPADQSATMRFGLTVRPAARDSSGKSPIADATAAAPTVFSSSSTSRRPTSLTAGTRGGAVASEPSSSGSHTRMLTRRAKAGLGQGDDGGAGRTQASGAGDAPVNNMVQSRQPPPPRSSPSGPSAPPATACADPFSRGPSVDRGDPASSVGGRHRIPTLTAAQSKANRELSHDMSVFTNRRIFSGLDQAQAGLSRSDGRTPHEESGQRKPTSADEGVIEDEIEDYEDSFGGPGLTVEAYMAEKHKAK 963
            MSELSELRTL ETT EIVSDQTKGL+Q             GTHSLAKAASGSSSKVLNVLETT P+AFLSLETRLSRVEETVAAAA XXXXXXXXXXXXXXXXXXXXXXXX LARR+DESVVG DCRERRP+ADSVSDGLSRKG RSP TD  +L PAPQQQYHQ     XXXXXXXXXXX XXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXX     PPE L G I+SG AQ   TRG RKRKN+DQQLE+QEPPSRRV QQ  T+R T  Q  +P  +      ++   + WQGADESLRWTQPWGGE GPATAAAAGASS+V +SPRHDPE P GVLEQRNSCHGGSGGEREE F PS   ASSSFASSAV +NNRNSQRV DDAEVDMPSSSLPL EADSFNPFQDADLV ITTGSIGAKAPG+VSTSRRQGSRSPPAPNTFPA+QSATMR GL VRPAARDSSGKSPIADATAAAPTV SSSSTS RPTS TAGTRGGAVA EPS SGSHTRM+TR+AKAGL QGD GGAGRTQASGAGDAPV +MVQS+Q                    +PFSRGPS+DRGDPASSVGG H     TAA+SKAN ELSHD+SV TNRR  SGLDQAQAGL RSDGRTPHEESG+RKPTSAD GVIEDEIEDYEDS GGPGLTVEAYMAEKHKAK
Sbjct:    1 MSELSELRTLVETTHEIVSDQTKGLDQ-------------GTHSLAKAASGSSSKVLNVLETTTPSAFLSLETRLSRVEETVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXLARRFDESVVGIDCRERRPVADSVSDGLSRKGDRSPITDGGRLSPAPQQQYHQQHEGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTIPPPEILLGGIISGSAQGSGTRGGRKRKNDDQQLEHQEPPSRRVFQQSCTNRGTKPQLLMP-VIDLTFSASRKLTNQWQGADESLRWTQPWGGEAGPATAAAAGASSRVRRSPRHDPETPRGVLEQRNSCHGGSGGEREERFPPSTGGASSSFASSAVPYNNRNSQRVVDDAEVDMPSSSLPLCEADSFNPFQDADLVPITTGSIGAKAPGNVSTSRRQGSRSPPAPNTFPAEQSATMRSGLAVRPAARDSSGKSPIADATAAAPTVSSSSSTSTRPTS-TAGTRGGAVAGEPSFSGSHTRMITRKAKAGLRQGD-GGAGRTQASGAGDAPVGHMVQSQQXXXXXXXXXXXXXXXXXXSGNPFSRGPSMDRGDPASSVGGVH-----TAAESKANCELSHDVSVRTNRRNVSGLDQAQAGLIRSDGRTPHEESGKRKPTSADVGVIEDEIEDYEDSLGGPGLTVEAYMAEKHKAK 674          
BLAST of mRNA_Ecto-sp13_S_contig572.16120.1 vs. uniprot
Match: D8LHD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHD9_ECTSI)

HSP 1 Score: 313 bits (801), Expect = 9.630e-96
Identity = 167/202 (82.67%), Postives = 176/202 (87.13%), Query Frame = 0
Query:  500 MSGRAQEGSTRGSRKRKNEDQQLENQEPPSRRVLQQDGTDRVTNEQPNIPQALQGVDHDTQDGESSWQGADESLRWTQPWGGEPGPATAAAAGASSQVGQSPRHDPEIPGGVLEQRNSCHGGSGGEREELFSPSARDASSSFASSAVQHNNRNSQRVADDAEVDMPSSSLPLFEADSFNPFQDADLVHITTGSIGAKAPGSV 701
            MSG AQE  TRGSRKRK +DQQLE+QEPPSRR+LQQDGTDR T E P++PQALQ V+HDTQ GESSWQGADESLRWTQPWGGE GPATAAA GA S+V QSPR+DPEIP GVLEQRNSCH GSGGER E FS SA  ASSSF SSAV HNNRNSQRVADDAEVDMPSSSLPL EADSFNPFQDADL  ITTGSIGAKAPG+ 
Sbjct:    1 MSGSAQESGTRGSRKRKYDDQQLEHQEPPSRRILQQDGTDRATKELPDMPQALQSVNHDTQGGESSWQGADESLRWTQPWGGETGPATAAAVGAPSRVRQSPRNDPEIPRGVLEQRNSCHDGSGGERVEPFSSSAGGASSSFKSSAVPHNNRNSQRVADDAEVDMPSSSLPLCEADSFNPFQDADLAPITTGSIGAKAPGNA 202          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig572.16120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF31_9PHAE2.790e-26778.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD9_ECTSI9.630e-9682.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig572contigEcto-sp13_S_contig572:4889..13335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig572.16120.1mRNA_Ecto-sp13_S_contig572.16120.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig572 4889..13335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig572.16120.1 ID=prot_Ecto-sp13_S_contig572.16120.1|Name=mRNA_Ecto-sp13_S_contig572.16120.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1047bp
MDRNPRTFSSGRRRNVVKPGRIDTILGNDRQGLRLNFGLAMHQHRSYTSV
PSSRVPTHGGSVGGGHRGGSARDAAGAGADSSEPLTLSGSLSQEPYSHGM
FPSQGFSLSQGTASQMGHQSQQSETGGYGMSQPSPDLLAPYVSARHGHTG
SGAGRATPTNKGAEVDAAGGQDRHVIESLRGAESGNSAHHQNNHHSQSRQ
KAHGSNFSSSTTSSAKARRPQPLPRDGVREKGHAVRVSHGRSGKGVDVDG
AVGTTAAVQAFDRLLSEQFRNQVMSELSELRTLFETTREIVSDQTKGLNQ
VSTATNELREELQGTHSLAKAASGSSSKVLNVLETTIPAAFLSLETRLSR
VEETVAAAAETAASTVASAKDAAAAAAAAASAASALARRYDESVVGNDCR
ERRPLADSVSDGLSRKGARSPSTDDRQLYPAPQQQYHQQHEEHQDQHQHQ
HQHQRRRQQRHQQRWWQEEQRQQQQEEPRQQRQEQREMMPPPEFLQGPIM
SGRAQEGSTRGSRKRKNEDQQLENQEPPSRRVLQQDGTDRVTNEQPNIPQ
ALQGVDHDTQDGESSWQGADESLRWTQPWGGEPGPATAAAAGASSQVGQS
PRHDPEIPGGVLEQRNSCHGGSGGEREELFSPSARDASSSFASSAVQHNN
RNSQRVADDAEVDMPSSSLPLFEADSFNPFQDADLVHITTGSIGAKAPGS
VSTSRRQGSRSPPAPNTFPADQSATMRFGLTVRPAARDSSGKSPIADATA
AAPTVFSSSSTSRRPTSLTAGTRGGAVASEPSSSGSHTRMLTRRAKAGLG
QGDDGGAGRTQASGAGDAPVNNMVQSRQPPPPRSSPSGPSAPPATACADP
FSRGPSVDRGDPASSVGGRHRIPTLTAAQSKANRELSHDMSVFTNRRIFS
GLDQAQAGLSRSDGRTPHEESGQRKPTSADEGVIEDEIEDYEDSFGGPGL
TVEAYMAEKHKAKLSQNRGTPKDKKAATRKKGEEETTAPETNRPSARNKP
PPHNRGSSRRDSLAAPTLAVRDSNAGGGSNHKSNIDSWIAGGGSGW*
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