prot_Ecto-sp13_S_contig5713.16109.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5713.16109.1
Unique Nameprot_Ecto-sp13_S_contig5713.16109.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length139
Homology
BLAST of mRNA_Ecto-sp13_S_contig5713.16109.1 vs. uniprot
Match: D7FJD8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJD8_ECTSI)

HSP 1 Score: 239 bits (611), Expect = 5.650e-79
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
Query:   20 VHILSQPEWKTMPSSKLAQTLLFVTLLNWEVAVGSVDLDMNDGEVRYKTTAEFGEAKDIKPILATFLDYHFSCGLRYLKAFIAIRDENVSAERAMEIAGHRGGGSSDGLLAEIVRTTLQ 138
            VHILSQPEWKTMPSSKLAQTLLFVTLLNWEVAVGSVDLDMNDGEVRYKTTAEFGEAKDIKPILATFLDYHFSCGLRYLKAFIAIRDENVSAERAMEIAGHRGGGSSDGLLAEIVRTTLQ
Sbjct:   58 VHILSQPEWKTMPSSKLAQTLLFVTLLNWEVAVGSVDLDMNDGEVRYKTTAEFGEAKDIKPILATFLDYHFSCGLRYLKAFIAIRDENVSAERAMEIAGHRGGGSSDGLLAEIVRTTLQ 176          
BLAST of mRNA_Ecto-sp13_S_contig5713.16109.1 vs. uniprot
Match: A0A6H5L4J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J9_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 3.490e-78
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
Query:   20 VHILSQPEWKTMPSSKLAQTLLFVTLLNWEVAVGSVDLDMNDGEVRYKTTAEFGEAKDIKPILATFLDYHFSCGLRYLKAFIAIRDENVSAERAMEIAGHRGGGSSDGLLAEIVRTTLQ 138
            VHILSQPEWKTMPSSKLAQTLLFVTLLNWEVAVGSVDLDMNDGEVRYKTTAEFGEAK+IKPILATFLDYHFSCGLRYLKAFIAIRDENVSAERAMEIAGHRGGGSSDGLLAEIVRTTLQ
Sbjct:   60 VHILSQPEWKTMPSSKLAQTLLFVTLLNWEVAVGSVDLDMNDGEVRYKTTAEFGEAKNIKPILATFLDYHFSCGLRYLKAFIAIRDENVSAERAMEIAGHRGGGSSDGLLAEIVRTTLQ 178          
BLAST of mRNA_Ecto-sp13_S_contig5713.16109.1 vs. uniprot
Match: A0A356KGV4_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356KGV4_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 3.540e-5
Identity = 23/78 (29.49%), Postives = 42/78 (53.85%), Query Frame = 0
Query:   32 PSSKLAQTLLFVTLLNWEVAVGSVDLDMNDGEVRYKTTAEFGEAKDIKPILATFLDYHFSCGLRYLKAFIAIRDENVS 109
            P  K +  + F+T  N+ + +G+ ++D+NDGE+RYKT+ +    K +KP++   +    S   RY      +   N+S
Sbjct:   64 PEDKRSAIMEFLTRANYGMQIGNFEIDLNDGEIRYKTSVDLEGTKQVKPLIRQCVAACLSIADRYFTGIGGVLYANLS 141          
BLAST of mRNA_Ecto-sp13_S_contig5713.16109.1 vs. uniprot
Match: A0A8J3EVM3_9ACTN (Uncharacterized protein n=1 Tax=Egicoccus halophilus TaxID=1670830 RepID=A0A8J3EVM3_9ACTN)

HSP 1 Score: 50.4 bits (119), Expect = 5.870e-5
Identity = 26/90 (28.89%), Postives = 53/90 (58.89%), Query Frame = 0
Query:   29 KTMPSSKLAQTLLFVTLLNWEVAVGSVDLDMNDGEVRYKTTAEFGEAKDIKPILATFLDYHFSCGLRYLKAFIAIRDENVS-AERAMEIA 117
            + +P+   A     +T  N+ + +G+ +LD+ DGE+R+KT+ + G  +    +LA+ ++++ +   RYL A  A+ D  V  A+R +++A
Sbjct:   70 REVPARHRAAMATLLTRANYGLLIGNFELDLADGELRFKTSLDHGADQLTGTLLASLIEHNVAAFDRYLPALDAVLDGEVEEADRRLQVA 159          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5713.16109.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FJD8_ECTSI5.650e-79100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4J9_9PHAE3.490e-7899.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A356KGV4_9BACT3.540e-529.49Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A8J3EVM3_9ACTN5.870e-528.89Uncharacterized protein n=1 Tax=Egicoccus halophil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5713contigEcto-sp13_S_contig5713:4632..6442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5713.16109.1mRNA_Ecto-sp13_S_contig5713.16109.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5713 3705..6516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5713.16109.1 ID=prot_Ecto-sp13_S_contig5713.16109.1|Name=mRNA_Ecto-sp13_S_contig5713.16109.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=139bp
MHLALGGCRRATRRTARGDVHILSQPEWKTMPSSKLAQTLLFVTLLNWEV
AVGSVDLDMNDGEVRYKTTAEFGEAKDIKPILATFLDYHFSCGLRYLKAF
IAIRDENVSAERAMEIAGHRGGGSSDGLLAEIVRTTLQ*
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