prot_Ecto-sp13_S_contig56535.16004.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56535.16004.1
Unique Nameprot_Ecto-sp13_S_contig56535.16004.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A6H5L214_9PHAE (Plug_translocon domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=A0A6H5L214_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 1.250e-24
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG
Sbjct:  116 KLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 171          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A7S2XXJ1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXJ1_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 8.220e-23
Identity = 53/56 (94.64%), Postives = 54/56 (96.43%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFGILITIGEAVAYVVSGMYGDL TLGAGNAILII QLFFAGLIVIILDELLQKG
Sbjct:  116 KLFGILITIGEAVAYVVSGMYGDLGTLGAGNAILIIAQLFFAGLIVIILDELLQKG 171          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A6V2TM26_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2TM26_HETAK)

HSP 1 Score: 94.7 bits (234), Expect = 2.020e-21
Identity = 47/56 (83.93%), Postives = 55/56 (98.21%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFGILIT+GEAVAYV+SGMYGDL+TLGAGNA+LII QLFFAGL+V++LDELLQKG
Sbjct:  116 KLFGILITLGEAVAYVISGMYGDLATLGAGNALLIITQLFFAGLVVLLLDELLQKG 171          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A482RU87_9ARCH (Preprotein translocase subunit SecY n=2 Tax=cellular organisms TaxID=131567 RepID=A0A482RU87_9ARCH)

HSP 1 Score: 94.0 bits (232), Expect = 2.520e-21
Identity = 49/56 (87.50%), Postives = 54/56 (96.43%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFGILITIGEA+AYVVSGMYGDL+TLGAGNAILII QLF AG++VIILDELLQKG
Sbjct:   43 KLFGILITIGEAIAYVVSGMYGDLATLGAGNAILIILQLFAAGMVVIILDELLQKG 98          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A0G4G804_VITBC (Plug_translocon domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G804_VITBC)

HSP 1 Score: 94.4 bits (233), Expect = 2.790e-21
Identity = 50/56 (89.29%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFG+LITIGEA+AYVVSGMYGDL  LGAGNAILII QLFFAGLIVIILDELLQKG
Sbjct:  120 KLFGMLITIGEAIAYVVSGMYGDLKELGAGNAILIILQLFFAGLIVIILDELLQKG 175          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A7S4MCE0_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S4MCE0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 5.260e-21
Identity = 47/56 (83.93%), Postives = 54/56 (96.43%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFGILIT+GEA+AYVVSGMYGDL+T+GAGNA+LII QLFFAGLIV+ LDELLQKG
Sbjct:  116 KLFGILITVGEAIAYVVSGMYGDLATIGAGNALLIISQLFFAGLIVLTLDELLQKG 171          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A7S1MN71_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MN71_ALECA)

HSP 1 Score: 87.8 bits (216), Expect = 6.390e-21
Identity = 44/56 (78.57%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFG+LIT+GEAVAYV+SGMYGDL  LGAGN++LII QLFFAG+IVI+LDEL+QKG
Sbjct:   58 KLFGMLITMGEAVAYVMSGMYGDLRELGAGNSLLIIMQLFFAGIIVILLDELMQKG 113          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A0G4FL78_9ALVE (Plug_translocon domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FL78_9ALVE)

HSP 1 Score: 92.0 bits (227), Expect = 1.880e-20
Identity = 48/56 (85.71%), Postives = 53/56 (94.64%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFG+LITIGEAVAYV+SGMYGD+S LG GNAILII QLFFAG+IVIILDELLQKG
Sbjct:  119 KLFGMLITIGEAVAYVISGMYGDVSELGVGNAILIILQLFFAGVIVIILDELLQKG 174          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A8J5XI08_DIALT (Plug_translocon domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XI08_DIALT)

HSP 1 Score: 91.3 bits (225), Expect = 3.630e-20
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFGILITIGEAVAYV+SGMYGD+  LGAGNA+LII QLF AGLIVIILDELLQKG
Sbjct:  121 KLFGILITIGEAVAYVISGMYGDVRELGAGNAVLIIIQLFIAGLIVIILDELLQKG 176          
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Match: A0A7S1D8Y6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D8Y6_CYCTE)

HSP 1 Score: 89.7 bits (221), Expect = 6.710e-20
Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 0
Query:    1 QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILDELLQKG 56
            +LFGILIT+GEA+AYVVSGMYGDL ++GAGNAILII QLF AGLIV+ LDELLQKG
Sbjct:  122 KLFGILITVGEAIAYVVSGMYGDLGSIGAGNAILIIAQLFCAGLIVLTLDELLQKG 177          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56535.16004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L214_9PHAE1.250e-2498.21Plug_translocon domain-containing protein n=3 Tax=... [more]
A0A7S2XXJ1_9STRA8.220e-2394.64Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V2TM26_HETAK2.020e-2183.93Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A482RU87_9ARCH2.520e-2187.50Preprotein translocase subunit SecY n=2 Tax=cellul... [more]
A0A0G4G804_VITBC2.790e-2189.29Plug_translocon domain-containing protein n=3 Tax=... [more]
A0A7S4MCE0_9STRA5.260e-2183.93Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
A0A7S1MN71_ALECA6.390e-2178.57Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A0G4FL78_9ALVE1.880e-2085.71Plug_translocon domain-containing protein n=1 Tax=... [more]
A0A8J5XI08_DIALT3.630e-2085.71Plug_translocon domain-containing protein n=1 Tax=... [more]
A0A7S1D8Y6_CYCTE6.710e-2082.14Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023201SecY domain superfamilyGENE3D1.10.3370.10coord: 1..56
e-value: 3.0E-12
score: 47.9
IPR023201SecY domain superfamilySUPERFAMILY103491Preprotein translocase SecY subunitcoord: 2..55
IPR002208SecY/SEC61-alpha familyPANTHERPTHR10906SECY/SEC61-ALPHA FAMILY MEMBERcoord: 2..56
NoneNo IPR availablePANTHERPTHR10906:SF20coord: 2..56
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..56
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 2..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56535contigEcto-sp13_S_contig56535:706..876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56535.16004.1mRNA_Ecto-sp13_S_contig56535.16004.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56535 706..876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56535.16004.1 ID=prot_Ecto-sp13_S_contig56535.16004.1|Name=mRNA_Ecto-sp13_S_contig56535.16004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
QLFGILITIGEAVAYVVSGMYGDLSTLGAGNAILIICQLFFAGLIVIILD
ELLQKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023201SecY_dom_sf
IPR002208SecY/SEC61-alpha