prot_Ecto-sp13_S_contig5619.15956.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5619.15956.1
Unique Nameprot_Ecto-sp13_S_contig5619.15956.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length156
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5619.15956.1 vs. uniprot
Match: D7FGY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY1_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 4.960e-84
Identity = 133/145 (91.72%), Postives = 134/145 (92.41%), Query Frame = 0 
Query:   11 LSERIEAARHRKDTLDHPLILPLARMVENELRVVSFAVRAIHLQETSFVQHQEFVLCQMELRNAIATWEGGHLGQVLCRRVKAILMARNGGHEGPLALQRGSTIGLSFKSPLFFSYPDGTVSQEAVVNGITGLEGTTTNFAFSIG 155
            LSERIEA R  KDTLDHPLILPLARMVE+ELRVVSFAVRAIHLQETSFVQ QEFVLCQMELRNAI TWE GHLGQVLCRRVKAILMARNGGHEGP  LQRGST GLSFKSPLFFSY DGTVSQEAVVNGI GLEGTTTNFAFSIG
Sbjct:  169 LSERIEAVRRSKDTLDHPLILPLARMVESELRVVSFAVRAIHLQETSFVQLQEFVLCQMELRNAITTWERGHLGQVLCRRVKAILMARNGGHEGPPVLQRGSTKGLSFKSPLFFSYSDGTVSQEAVVNGIDGLEGTTTNFAFSIG 313
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BLAST of mRNA_Ecto-sp13_S_contig5619.15956.1 vs. uniprot
Match: A0A6H5JIA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA1_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 1.200e-55
Identity = 94/104 (90.38%), Postives = 97/104 (93.27%), Query Frame = 0 
Query:   10 SLSERIEAARHRKDTLDHPLILPLARMVENELRVVSFAVRAIHLQETSFVQHQEFVLCQMELRNAIATWEGGHLGQVLCRRVKAILMARNGGHEGPLALQRGST 113
            SL +RIEAAR  KDTLDH LILPLARM ENELRVVSFAVRAIHLQETSFVQ Q+FVLCQMELR+AI TWEGGHLGQVLCRRVKAILMARNGGHEGPLALQRGST
Sbjct:  167 SLCQRIEAARRSKDTLDHQLILPLARMFENELRVVSFAVRAIHLQETSFVQRQDFVLCQMELRDAITTWEGGHLGQVLCRRVKAILMARNGGHEGPLALQRGST 270
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5619.15956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FGY1_ECTSI4.960e-8491.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIA1_9PHAE1.200e-5590.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5619contigEcto-sp13_S_contig5619:408..4203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5619.15956.1mRNA_Ecto-sp13_S_contig5619.15956.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5619 2..4705 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5619.15956.1 ID=prot_Ecto-sp13_S_contig5619.15956.1|Name=mRNA_Ecto-sp13_S_contig5619.15956.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=156bp
MITFVAFPRSLSERIEAARHRKDTLDHPLILPLARMVENELRVVSFAVRA
IHLQETSFVQHQEFVLCQMELRNAIATWEGGHLGQVLCRRVKAILMARNG
GHEGPLALQRGSTIGLSFKSPLFFSYPDGTVSQEAVVNGITGLEGTTTNF
AFSIG*
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