prot_Ecto-sp13_S_contig56179.15952.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56179.15952.1
Unique Nameprot_Ecto-sp13_S_contig56179.15952.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length72
Homology
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: A0A6H5L0V2_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0V2_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.460e-18
Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 0
Query:    2 FGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEGKI 71
            FGGKTILFSGDWRQ  P++K+G+  + V+ A +SS+ W+H+ R RLTKS R+++D  YA  V  VGE K+
Sbjct:   59 FGGKTILFSGDWRQTGPIVKHGSPTDTVDAAVISSHRWKHISRLRLTKSQRDKDDPAYASFVRNVGEDKL 128          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: A0A6H5K5W5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W5_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.910e-18
Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = 0
Query:    2 FGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEG 69
            FGGKTILFSGDWRQ  P++K G+  + V+ AF+SS LW +V R +LTKS R++ D  Y+  V A+GEG
Sbjct:   64 FGGKTILFSGDWRQTGPIVKNGSATDTVDAAFISSVLWTNVHRMKLTKSQRDREDPQYSAFVRAIGEG 131          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: A0A6H5J9C5_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C5_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 6.170e-18
Identity = 39/69 (56.52%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 PFGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEG 69
            PFGGKTILFSGDWRQ  P++K     + V+ AF+SS LW+ V RFRL KS R++ D  YA  V ++GEG
Sbjct:  112 PFGGKTILFSGDWRQTGPIVKNAAPTDTVDAAFISSPLWKGVMRFRLNKSQRDKEDPQYASFVRSIGEG 180          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: D4BSK2_BIFBR (Uncharacterized protein (Fragment) n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 TaxID=518634 RepID=D4BSK2_BIFBR)

HSP 1 Score: 75.9 bits (185), Expect = 1.380e-16
Identity = 32/68 (47.06%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    2 FGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEG 69
            FGGKT++F GD+RQV P+++ G+ A+IV  +   S+LW+H+Q  RL  +MR QND  +A  +L +G+G
Sbjct:    3 FGGKTVVFGGDFRQVLPIVRKGSRAQIVGASLRRSHLWDHMQHLRLVHNMRAQNDREFADYLLRIGDG 70          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: A0A2T8KVT8_9POAL (ATP-dependent DNA helicase n=1 Tax=Panicum hallii TaxID=206008 RepID=A0A2T8KVT8_9POAL)

HSP 1 Score: 80.9 bits (198), Expect = 3.640e-16
Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 PFGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEG 69
            PFGGK +LF GD+RQV PV+ +GT A+I +   L SY+WE V+R RLT++MR Q+D  +A  +L +G G
Sbjct:  616 PFGGKVMLFGGDFRQVLPVVPHGTRAQITDATLLRSYIWESVRRIRLTQNMRAQSDTWFADYLLRIGNG 684          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: UPI00052FE566 (uncharacterized protein LOC100825684 n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI00052FE566)

HSP 1 Score: 77.8 bits (190), Expect = 4.560e-16
Identity = 33/69 (47.83%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    1 PFGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEG 69
            PFGGK ++F GD+RQV PV+  GT A+I + A L S+LWE++++ RLT++MR Q+D  +++ +L +G G
Sbjct:   23 PFGGKVVVFGGDFRQVLPVVTRGTRAQITDAALLRSHLWENIRKIRLTRNMRAQDDPWFSEYLLRIGNG 91          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: UPI000B778467 (uncharacterized protein LOC110681758 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B778467)

HSP 1 Score: 79.3 bits (194), Expect = 1.250e-15
Identity = 34/71 (47.89%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    2 FGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEGKIQ 72
            FGGK I+F GD+RQV PV+   T+ E VE + +SSY+W+H++RFRLT+++R + D  + + +LA+G G++Q
Sbjct:  270 FGGKVIVFGGDFRQVLPVVPNKTQREAVEASVVSSYIWQHLRRFRLTENLRAKEDPSFCQFLLALGNGELQ 340          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: UPI00053F4CE0 (uncharacterized protein LOC104905070 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F4CE0)

HSP 1 Score: 79.3 bits (194), Expect = 1.280e-15
Identity = 35/72 (48.61%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    1 PFGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEGKIQ 72
            PFGGK I+F GD+RQV P++ + T+AE VE + +SS LW  + RF LT++MR + D P+++ +LA+G G +Q
Sbjct: 1081 PFGGKVIVFGGDFRQVLPIVPHKTQAEAVEASLVSSALWTTLTRFSLTENMRAREDQPFSEFLLALGNGSLQ 1152          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: A0A2S2PHD9_SCHGA (ATP-dependent DNA helicase (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PHD9_SCHGA)

HSP 1 Score: 73.6 bits (179), Expect = 2.280e-15
Identity = 30/71 (42.25%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    1 PFGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEGKI 71
            PFGGK +LF+GD+RQ+ PV++ GT ++IV  +   + LW  +++F LT++MR  ND+ +A  +L +G G++
Sbjct:   16 PFGGKPVLFAGDFRQILPVVRRGTRSDIVRSSIKYNSLWRDLEQFNLTRNMRADNDVDFATWLLQLGNGQL 86          
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Match: UPI000B780AA0 (uncharacterized protein LOC110727680 n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B780AA0)

HSP 1 Score: 78.6 bits (192), Expect = 2.350e-15
Identity = 34/71 (47.89%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    2 FGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKSMRNQNDLPYAKTVLAVGEGKIQ 72
            FGGK I+F GD+RQV PV+   T  E VE + +SSY+W+H++RFRLT+++R + D  +++ +LA+G G++Q
Sbjct:  573 FGGKVIIFGGDFRQVLPVVPNKTIREAVEASIVSSYIWQHLRRFRLTENLRAREDPSFSQFLLALGNGELQ 643          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56179.15952.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0V2_9PHAE1.460e-1854.29ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5K5W5_9PHAE2.910e-1855.88ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
A0A6H5J9C5_9PHAE6.170e-1856.52ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
D4BSK2_BIFBR1.380e-1647.06Uncharacterized protein (Fragment) n=1 Tax=Bifidob... [more]
A0A2T8KVT8_9POAL3.640e-1652.17ATP-dependent DNA helicase n=1 Tax=Panicum hallii ... [more]
UPI00052FE5664.560e-1647.83uncharacterized protein LOC100825684 n=1 Tax=Brach... [more]
UPI000B7784671.250e-1547.89uncharacterized protein LOC110681758 n=1 Tax=Cheno... [more]
UPI00053F4CE01.280e-1548.61uncharacterized protein LOC104905070 n=1 Tax=Beta ... [more]
A0A2S2PHD9_SCHGA2.280e-1542.25ATP-dependent DNA helicase (Fragment) n=1 Tax=Schi... [more]
UPI000B780AA02.350e-1547.89uncharacterized protein LOC110727680 n=2 Tax=Cheno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 1..71
e-value: 5.2E-17
score: 62.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56179contigEcto-sp13_S_contig56179:661..876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56179.15952.1mRNA_Ecto-sp13_S_contig56179.15952.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56179 661..876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56179.15952.1 ID=prot_Ecto-sp13_S_contig56179.15952.1|Name=mRNA_Ecto-sp13_S_contig56179.15952.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=72bp
PFGGKTILFSGDWRQVAPVLKYGTEAEIVEQAFLSSYLWEHVQRFRLTKS
MRNQNDLPYAKTVLAVGEGKIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like