prot_Ecto-sp13_S_contig5605.15938.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5605.15938.1
Unique Nameprot_Ecto-sp13_S_contig5605.15938.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length138
Homology
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: D8LQK5_ECTSI (Transcriptional regulator, AraC family with Parallel beta-helix repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQK5_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 5.750e-19
Identity = 55/139 (39.57%), Postives = 79/139 (56.83%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSGDGLDCSNSYIGNSSRFSPGAK-FECTATLTLEQIHIDGRCVESAS 138
            QADID+G  +    V ++ P  +A  V   S  T PLP+ PGV I K +   T A G   ++VDAGDT+ + ++V N GNTW+  + V DP   +G+ CS     + SRF+ GA    CTAT+ ++Q  +D   +ES S
Sbjct:  578 QADIDSGESTSAVVVKAMPPGANAEPVTSSSHSTVPLPQAPGVSITKTLSTHTVALGRDQTIVDAGDTMNFTMSVENVGNTWVSAIVVLDPFL-EGIACSPDLSASDSRFAVGAAAVVCTATVPVDQAMVDDGFMESES 715          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: A0A849HKK8_9MICO (DUF11 domain-containing protein n=2 Tax=Knoellia sp. DB2414S TaxID=2730921 RepID=A0A849HKK8_9MICO)

HSP 1 Score: 82.4 bits (202), Expect = 1.390e-15
Identity = 54/131 (41.22%), Postives = 73/131 (55.73%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSG-DGLDCSNSYIGNSSRFSPGAKFECTATLTLEQIHID 130
            QAD+DAG + +TA+  +  P   A  V DD++ T+ LP  PG+ I K   + T + G   +  DAGDT+ Y +TVTNTG   L DV ++D   G  G+ CS +     S  +PGA   CT T TL Q  ID
Sbjct: 3290 QADLDAGVVRNTATATATPPG-GATPVTDDATATSTLPTSPGIAIDKVAGEPTVSGGRLGTTTDAGDTITYTLTVTNTGTVTLRDVEITDEKLGLAGVPCSGA-----STLAPGASATCTFTYTLAQPDID 3414          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: A0A427SX95_9PSEU (DUF11 domain-containing protein n=3 Tax=Amycolatopsis TaxID=1813 RepID=A0A427SX95_9PSEU)

HSP 1 Score: 78.2 bits (191), Expect = 4.060e-14
Identity = 50/130 (38.46%), Postives = 71/130 (54.62%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSGDGLDCSNSYIGNSSRFSPGAKFECTATLTLEQIHID 130
            Q+D+DAG + +TA+     P  S   V DD + T P+ + PG+ + K+    T   G  P   DAGDT+ Y  TVTNTGN  L  V+V+DP +G  + C    +      +PGA  +CTA+ TL Q  +D
Sbjct:  836 QSDVDAGKVDNTATASGRPP--SGGPVTDDDTATTPIAQVPGIALEKESGGSTDVDGNGP---DAGDTIAYTFTVTNTGNVTLDPVSVADPKAGT-VRCPEPKL------APGASTKCTASYTLTQSDVD 953          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: A0A7W4GV13_9ACTN (DUF11 domain-containing protein (Fragment) n=1 Tax=Tessaracoccus sp. MC1756 TaxID=2760311 RepID=A0A7W4GV13_9ACTN)

HSP 1 Score: 74.7 bits (182), Expect = 6.690e-13
Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSGDGLDCSNSYIGNSSRFSPGAKFECTATLTLEQIHIDGRCVESAS 138
            QAD+D GS+ +TA+ V   P    +   DD   T P  + P +E+ KD  DV S           GD + Y    TNTGN  L DV ++DP+  +GL          +  +PGA FEC+AT T+ Q  +D   V++ +
Sbjct: 2092 QADLDNGSVDNTATTVGTPPVGEPVTDTDDE--TVPAAQSPAIELTKDA-DVASYDAV-------GDVITYTFVATNTGNVTLTDVVITDPL--EGLSDLTCVPAQPTTLAPGASFECSATYTVTQADLDAGSVDNTA 2217          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: UPI00047DE064 (DUF11 domain-containing protein n=1 Tax=Haematomicrobium sanguinis TaxID=479106 RepID=UPI00047DE064)

HSP 1 Score: 74.7 bits (182), Expect = 6.730e-13
Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSGDGLDCSNSYIGNSSRFSPGAKFECTATLTLEQIHID 130
            QADIDAG + +TA+     P+  A+E  +DS+ T  L R+PG+ + K+   V   +G      DAGDT++Y  TVTNTGNT L  + +SDP+    + C  + +      +PG    C AT TL    +D
Sbjct:  108 QADIDAGQVDNTATASMRPPSGDAIER-EDSADTVVLEREPGMSLDKESSGVNDTNGTGRD--DAGDTIDYTFTVTNTGNTSLTLIGISDPLISGDIQCPTTSL------APGQSTTCNATYTLTPEDMD 228          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: A0A839IE64_9ACTN (DUF11 domain-containing protein n=1 Tax=Tessaracoccus sp. MC1865 TaxID=2760310 RepID=A0A839IE64_9ACTN)

HSP 1 Score: 74.7 bits (182), Expect = 6.740e-13
Identity = 48/138 (34.78%), Postives = 69/138 (50.00%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSGDGLDCSNSYIGNSSRFSPGAKFECTATLTLEQIHIDGRCVESAS 138
            QAD+D GS+ +TA+ V   P    +   DD   T P  + P +E+ KD  DV S           GD + Y    TNTGN  L DV ++DP+  +GL          +  +PGA FEC+AT T+ Q  +D   V++ +
Sbjct: 2092 QADLDNGSVDNTATTVGTPPVGEPVTDTDDE--TVPAAQSPAIELTKDA-DVASYDAV-------GDVITYTFVATNTGNVTLTDVVITDPL--EGLSDLTCVPAQPTTLAPGASFECSATYTVTQADLDAGSVDNTA 2217          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: UPI001E51F901 (hypothetical protein n=1 Tax=Tessaracoccus sp. ZS01 TaxID=1906324 RepID=UPI001E51F901)

HSP 1 Score: 73.6 bits (179), Expect = 1.690e-12
Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSG-DGLDCSNSYIGNSSRFSPGAKFECTATLTLEQIHIDGRCVESAS 138
            QAD+D GS+ +TA+     P     EV D    T P  + P +E+ KD  DV S           GD + Y    TNTGN  L DV ++DP+ G  GL C  +     +  +PGA  EC+AT T+ Q  +D   V++ +
Sbjct:  910 QADLDNGSVDNTATTTGAPPVGD--EVTDSDDETVPATQSPAIELTKDA-DVASYDAV-------GDVITYSFVATNTGNVTLTDVVITDPLPGLSGLTCDPAQP---TTLAPGASIECSATYTVTQADLDAGSVDNTA 1035          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: A0A1R1I223_9ACTN (Uncharacterized protein n=1 Tax=Tessaracoccus sp. ZS01 TaxID=1906324 RepID=A0A1R1I223_9ACTN)

HSP 1 Score: 73.6 bits (179), Expect = 1.700e-12
Identity = 49/139 (35.25%), Postives = 69/139 (49.64%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSG-DGLDCSNSYIGNSSRFSPGAKFECTATLTLEQIHIDGRCVESAS 138
            QAD+D GS+ +TA+     P     EV D    T P  + P +E+ KD  DV S           GD + Y    TNTGN  L DV ++DP+ G  GL C  +     +  +PGA  EC+AT T+ Q  +D   V++ +
Sbjct: 1502 QADLDNGSVDNTATTTGAPPVGD--EVTDSDDETVPATQSPAIELTKDA-DVASYDAV-------GDVITYSFVATNTGNVTLTDVVITDPLPGLSGLTCDPAQP---TTLAPGASIECSATYTVTQADLDAGSVDNTA 1627          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: UPI001C234DE1 (DUF11 domain-containing protein n=1 Tax=Brevibacterium luteolum TaxID=199591 RepID=UPI001C234DE1)

HSP 1 Score: 72.4 bits (176), Expect = 4.300e-12
Identity = 50/137 (36.50%), Postives = 70/137 (51.09%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSGDGLDCSNSYIGNSSRFSPGAKFECTA-TLTLEQIHIDGRCVES 136
            QADIDAG I +TA V     AP    +++D + T P+ RKP + + K   D+    G  P   D GD ++Y  TVTNTGNT L D+ ++D + G  L C   +  +    +PGA   C      L Q  +DG  V +
Sbjct: 1153 QADIDAGIILNTADVEVT--APGGENLIEDPAVTVPVERKPDLTVNKTASDLRDLDGNGP---DPGDALDYSFTVTNTGNTTLTDIELTDHILGGKLSCGTEFPAS---LTPGASATCGPFEYFLSQDDVDGEGVRN 1281          
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Match: UPI001F1159AE (DUF11 domain-containing protein n=1 Tax=Phycicoccus sp. HDW14 TaxID=2714941 RepID=UPI001F1159AE)

HSP 1 Score: 71.2 bits (173), Expect = 1.060e-11
Identity = 51/138 (36.96%), Postives = 72/138 (52.17%), Query Frame = 0
Query:    1 QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVIDVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSGDGLDCSNSYIGNSSRFSPGAKFECTATLTLEQIHIDGRCVESAS 138
            QAD+D+G++++TA+     PA  A  V DD + T  L   PGV + K    V   +G      DAGDTV Y  TVTN+G   L DV+V D + G       + I  ++  +PGA   CTA L L Q  +D   V++ +
Sbjct:  859 QADLDSGAVTNTATATGTDPAGRA--VTDDDATTTRLDGPPGVTLAKSAGPVRDTNGSGRQ--DAGDTVTYTFTVTNSGAVTLSDVSVRDEVVG------TTAIPCAATLAPGASATCTADLVLTQEEVDRGRVDNTA 986          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5605.15938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQK5_ECTSI5.750e-1939.57Transcriptional regulator, AraC family with Parall... [more]
A0A849HKK8_9MICO1.390e-1541.22DUF11 domain-containing protein n=2 Tax=Knoellia s... [more]
A0A427SX95_9PSEU4.060e-1438.46DUF11 domain-containing protein n=3 Tax=Amycolatop... [more]
A0A7W4GV13_9ACTN6.690e-1334.78DUF11 domain-containing protein (Fragment) n=1 Tax... [more]
UPI00047DE0646.730e-1337.69DUF11 domain-containing protein n=1 Tax=Haematomic... [more]
A0A839IE64_9ACTN6.740e-1334.78DUF11 domain-containing protein n=1 Tax=Tessaracoc... [more]
UPI001E51F9011.690e-1235.25hypothetical protein n=1 Tax=Tessaracoccus sp. ZS0... [more]
A0A1R1I223_9ACTN1.700e-1235.25Uncharacterized protein n=1 Tax=Tessaracoccus sp. ... [more]
UPI001C234DE14.300e-1236.50DUF11 domain-containing protein n=1 Tax=Brevibacte... [more]
UPI001F1159AE1.060e-1136.96DUF11 domain-containing protein n=1 Tax=Phycicoccu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001434Domain of unknown function DUF11PFAMPF01345DUF11coord: 59..95
e-value: 8.0E-8
score: 32.5
IPR001434Domain of unknown function DUF11TIGRFAMTIGR01451TIGR01451coord: 61..93
e-value: 8.3E-9
score: 33.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5605contigEcto-sp13_S_contig5605:6413..6826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5605.15938.1mRNA_Ecto-sp13_S_contig5605.15938.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5605 6413..6826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5605.15938.1 ID=prot_Ecto-sp13_S_contig5605.15938.1|Name=mRNA_Ecto-sp13_S_contig5605.15938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=138bp
QADIDAGSISDTASVVSLSPAPSAMEVVDDSSCTAPLPRKPGVEILKDVI
DVTSASGFHPSVVDAGDTVEYRITVTNTGNTWLGDVAVSDPMSGDGLDCS
NSYIGNSSRFSPGAKFECTATLTLEQIHIDGRCVESAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001434DUF11