prot_Ecto-sp13_S_contig560.15928.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig560.15928.1
Unique Nameprot_Ecto-sp13_S_contig560.15928.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length378
Homology
BLAST of mRNA_Ecto-sp13_S_contig560.15928.1 vs. uniprot
Match: D7FPM7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPM7_ECTSI)

HSP 1 Score: 742 bits (1916), Expect = 1.690e-270
Identity = 363/377 (96.29%), Postives = 370/377 (98.14%), Query Frame = 0
Query:    1 MMFSGRRAAQVAVLVATKAWLGDTECAFRLDGHLDITQPLTLIAPYVDPDSGYRLINPYNPIVYLVNENVYDRYPVNCSVDSWRYLLDNNVTYATNVTFPDANASENATEVSVPGLFAAESHELFIDSYSADKAVAISDSLFGRTIEVALSCDQVQTVTVEDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVLPLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFTGSDGNTYNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCNNINEREDGYVLFKVGDGNGYFDINVANYEAILTDSGSSAFATPWGGGAAGRGWLSSAFTFVVVGALTAWAGKLSESS 377
            MMF+GRRAAQVAVLVAT+AW GDTECAFRLDGHLDITQPLTLIAPYVDP SGYRLINPYNPIVYLVNENVYDRY VNCSVDSWRYLLDNNVTYATNVTFPDANA+ENATEVSVPGLFAAESHELFIDSYSADKAVAISDSLFGRTIEVALSCDQVQTVT EDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVLPLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFTGSDGN YNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCNN+NEREDGYV+FKVGDGNGYFDINVA+YEAILTDSGS+AFATPWGGGAAGRGWLSSAFTFVVVGALTAW GKLSE S
Sbjct:    1 MMFTGRRAAQVAVLVATQAWRGDTECAFRLDGHLDITQPLTLIAPYVDPGSGYRLINPYNPIVYLVNENVYDRYQVNCSVDSWRYLLDNNVTYATNVTFPDANATENATEVSVPGLFAAESHELFIDSYSADKAVAISDSLFGRTIEVALSCDQVQTVTAEDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVLPLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFTGSDGNAYNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCNNVNEREDGYVIFKVGDGNGYFDINVADYEAILTDSGSTAFATPWGGGAAGRGWLSSAFTFVVVGALTAWVGKLSEGS 377          
BLAST of mRNA_Ecto-sp13_S_contig560.15928.1 vs. uniprot
Match: D7FPM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM5_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 3.580e-79
Identity = 134/259 (51.74%), Postives = 180/259 (69.50%), Query Frame = 0
Query:   60 NPIVYLVNENVYDRYPVNCSVDSWRYLLDNNVTYATNVTFPDA-NASENATEVSVPGLFAAESH-ELFIDSYSADKAVAISDSLFGRTIEVALSCDQV-QTVTVEDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVLPLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFTGSDGNTYNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCNNINEREDGYVLFKVG 315
            NPIVYL ++   +   V+C+ DSWRY   N   + T ++FP    +S+ A  VS  G F A    E+ +       A A+SDSL+GR IE+AL+C+Q  Q V  EDSC+ FQ++FTN SP  D  +   AL+RF++PAVPG+ +PLA   SPGD+ LNEGNP+V++DGS    GCNG+++EYLGEDGEWY++FTGSDG  YN+THVFY T+ D L++A IQ+ WSPNLE AL NR VR+ I+C+N    EDGY++FK+G
Sbjct:   67 NPIVYLADDGTEEA--VDCTGDSWRYQAANG-EWKTELSFPATWESSDAAPMVSFEGFFNATGDGEITVSGIPTSIAPAVSDSLYGRNIELALTCNQEDQIVMEEDSCVLFQVDFTNYSPTFDVNM---ALFRFEDPAVPGIEMPLAQPLSPGDIQLNEGNPVVELDGSEVSWGCNGDMAEYLGEDGEWYFWFTGSDGQPYNLTHVFYTTDFDQLHIATIQSAWSPNLEAALHNRYVRLLIHCSNQVNHEDGYLIFKIG 319          
BLAST of mRNA_Ecto-sp13_S_contig560.15928.1 vs. uniprot
Match: A0A6H5L4X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X3_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 2.900e-21
Identity = 81/242 (33.47%), Postives = 112/242 (46.28%), Query Frame = 0
Query:   76 VNCSVDSWRYLLDNNVTYATNVTFPDA-NASENATEVSVPGLFAAESH-ELFIDSYSADKAVAISDSLFGRTIEVALSCDQVQTVTVEDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVLPLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFTGSDGNTYNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCNNINEREDGYVLFKVG 315
            ++C+ DSWR+   +   + T ++FP    +S+ A  VS  G F A    E+ I       A A++DSL+GR IE                                  LL  A  R     +P     +   YS    W            S+     +G  +EYL EDG WY +FTGSDG  YN+THVF+ T+ D L++A IQ+  S NLE A  NR VR+ I C+N    EDGY++F+VG
Sbjct:   18 IDCTGDSWRHQAADG-EWKTELSFPATWESSDAAPIVSFEGFFYAIGDVEVMISGIPTSIAPAVADSLYGRNIE----------------------------------LLWLATKR-----IPSSWRSILACYSK---WALR----TTAQRSMLTWRSSGSKAEYLREDGAWYSWFTGSDGQRYNLTHVFFTTDFDQLHIATIQSARSLNLEAASHNRYVRLLILCSNQVNHEDGYLIFQVG 212          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig560.15928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPM7_ECTSI1.690e-27096.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FPM5_ECTSI3.580e-7951.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4X3_9PHAE2.900e-2133.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..377
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig560contigEcto-sp13_S_contig560:11273..18300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig560.15928.1mRNA_Ecto-sp13_S_contig560.15928.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig560 11273..18361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig560.15928.1 ID=prot_Ecto-sp13_S_contig560.15928.1|Name=mRNA_Ecto-sp13_S_contig560.15928.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
MMFSGRRAAQVAVLVATKAWLGDTECAFRLDGHLDITQPLTLIAPYVDPD
SGYRLINPYNPIVYLVNENVYDRYPVNCSVDSWRYLLDNNVTYATNVTFP
DANASENATEVSVPGLFAAESHELFIDSYSADKAVAISDSLFGRTIEVAL
SCDQVQTVTVEDSCLQFQLNFTNGSPEVDKELLESALYRFQEPAVPGVVL
PLAGAYSPGDVWLNEGNPIVDIDGSVTDEGCNGEVSEYLGEDGEWYYYFT
GSDGNTYNMTHVFYATEQDHLNVAKIQAPWSPNLERALFNRTVRMSIYCN
NINEREDGYVLFKVGDGNGYFDINVANYEAILTDSGSSAFATPWGGGAAG
RGWLSSAFTFVVVGALTAWAGKLSESS*
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