prot_Ecto-sp13_S_contig56.15922.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig56.15922.1
Unique Nameprot_Ecto-sp13_S_contig56.15922.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length480
Homology
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BLAST of mRNA_Ecto-sp13_S_contig56.15922.1 vs. uniprot
Match: D7G541_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G541_ECTSI)

HSP 1 Score: 795 bits (2052), Expect = 1.810e-288
Identity = 408/437 (93.36%), Postives = 419/437 (95.88%), Query Frame = 0 
Query:   43 MAKKKLELRFAAREKFSLMDKGTRETTAAKSIQRVKAEADRQATQLWEEGFTYAPAMTGDDTETPPSAPRVVFENALTEEGFLGFARDLDLLGLPFATHTGLISLFRRYASKLTKGAALQARAKGLFSWLCKSSGVHRLGKEDIAKLLDGLGLPRVSDEDALPYTYADGMWDSNAFCRHLHDNQWITEVAGSDESVTSGNRLSGSADGASTDSRQRDSDESSTSSDRSELASAVSDSSVSTEDSTPWADRFVGMKKDGFEKAIQELACTVRLPGEACECEGCSTRRVREAKLEHQEGPTMDKEMERLRINAHANEMHTSWATVRLYFEVLAPNAAKLFAAKANASQDIFGSPWFSHTSRNLLFENDQMLREIFLTLVGRQGDRDALNDRGGGSRNQSEDTTVLKGLRADCRWVFSLASCRRSQRNVRVSALTMFRCA 479
            MAKKKLELRFAAREKFSLMDKGTRETTAAKSIQRVKAE +RQATQLWEEGFTYAPAM GDDTETPPSAPRVVFENALTEEGFLGFARDLD+L LPFATHTGLISLFRRYASKLTKGAALQARAKGLFSWLCKSSGVHRLGKEDIAKLLDGLGLPR+SDEDALPYTYADGMWD NAFCRHLHDNQWITEVA  DESVTSGNRLSGSADGAS DSRQRDSDESSTSSD SELASAVSDSSVST+DSTPWADRFVGMKKDGFEKAIQELACTVRLPGEACECEGCSTRRVREAKLEHQEG TMDKEMERLRI  HA E+HTSWATVRLYFE+LAPNAAKLFAAKANASQDIFGSPW S TSRNLLF+NDQML+EIFLTLVGRQGDRD+LNDR GGSRNQ EDTTVLKGLRADCRWVFSL+SCRRS+R  RVSALTMFRCA
Sbjct:    1 MAKKKLELRFAAREKFSLMDKGTRETTAAKSIQRVKAEVERQATQLWEEGFTYAPAMNGDDTETPPSAPRVVFENALTEEGFLGFARDLDILALPFATHTGLISLFRRYASKLTKGAALQARAKGLFSWLCKSSGVHRLGKEDIAKLLDGLGLPRISDEDALPYTYADGMWDYNAFCRHLHDNQWITEVADGDESVTSGNRLSGSADGASADSRQRDSDESSTSSDPSELASAVSDSSVSTDDSTPWADRFVGMKKDGFEKAIQELACTVRLPGEACECEGCSTRRVREAKLEHQEGTTMDKEMERLRIKMHAKELHTSWATVRLYFEILAPNAAKLFAAKANASQDIFGSPWSSPTSRNLLFDNDQMLQEIFLTLVGRQGDRDSLNDREGGSRNQLEDTTVLKGLRADCRWVFSLSSCRRSRRKFRVSALTMFRCA 437
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig56.15922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G541_ECTSI1.810e-28893.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig56contigEcto-sp13_S_contig56:23435..31007 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig56.15922.1mRNA_Ecto-sp13_S_contig56.15922.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig56 23435..31069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig56.15922.1 ID=prot_Ecto-sp13_S_contig56.15922.1|Name=mRNA_Ecto-sp13_S_contig56.15922.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=480bp
MTVQLRRRGVATVEPVKIDHVEDRRPTARSKGLSKTLKRAEHMAKKKLEL
RFAAREKFSLMDKGTRETTAAKSIQRVKAEADRQATQLWEEGFTYAPAMT
GDDTETPPSAPRVVFENALTEEGFLGFARDLDLLGLPFATHTGLISLFRR
YASKLTKGAALQARAKGLFSWLCKSSGVHRLGKEDIAKLLDGLGLPRVSD
EDALPYTYADGMWDSNAFCRHLHDNQWITEVAGSDESVTSGNRLSGSADG
ASTDSRQRDSDESSTSSDRSELASAVSDSSVSTEDSTPWADRFVGMKKDG
FEKAIQELACTVRLPGEACECEGCSTRRVREAKLEHQEGPTMDKEMERLR
INAHANEMHTSWATVRLYFEVLAPNAAKLFAAKANASQDIFGSPWFSHTS
RNLLFENDQMLREIFLTLVGRQGDRDALNDRGGGSRNQSEDTTVLKGLRA
DCRWVFSLASCRRSQRNVRVSALTMFRCA*
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