prot_Ecto-sp13_S_contig5593.15910.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5593.15910.1
Unique Nameprot_Ecto-sp13_S_contig5593.15910.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length900
Homology
BLAST of mRNA_Ecto-sp13_S_contig5593.15910.1 vs. uniprot
Match: D7FW09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW09_ECTSI)

HSP 1 Score: 1453 bits (3761), Expect = 0.000e+0
Identity = 773/902 (85.70%), Postives = 802/902 (88.91%), Query Frame = 0
Query:    1 SKGTSSTERRPPSSGQQPDQPGVGGGRGGVPSSXXXXXXXXXXXXXXXXXDHGDSSGDVTKQETVVDAAKARALGFELWCKNPYTWFSFGEVVLEGGCYALTLAFLVKAVALLPSGLHQQEKASLTRKRRLILRFGRFSDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQARYTRDSQSALRVQRAWRRHRVIRVLHDLVSKQIAALRIQRFMRKWRKNGFILALRLVATSALELRQLGAKYTKAMGLTAQAAAANRLXXXXXXXXXXXXXARALIAHRRVSRRKQAIAALQAFCRGCRLRWALSAAFEESLRLESVAHDLRQQRDCGDGGREEGAYTCKEVVQPSLNPEGVGNTDREGRRGLLATPLRPRHWDGCKPHKE-TLAGYNAPPNVQLGVITRRNFPMDVGCAKGFRPPNLAAFLWESREDAYGSRCADHGADDNKTLVAPHLSKETESPRSYVDTAVARSSHGDDGAVFEASATAVASSACREDLVRMGSERNEVDLGDCLSGQHGGGRPPAFEELPASPVSALPLLQPPRWVPATVAPEGAFHRALACSTLIVSSPSFDSASARRLFSRMGKPMPAASPPRDEPQQEADDVKGMAAGVRRGQADRNPTHREEKG--RPKKHPTGCLHANGLKHILLLGESPIGDGGLSELSSAMRCGWLPRLTTLVIGGPGCKVGPRGVAALAKALSTSGCSQLQHLSMSNCCRGRPKRXXXXXXXGCKTWLLNLTSVSAEKAAAEAHAAWDCFFRHLQRLPSLTTLSIQDAGLENRDVRSMSIAMQILPADRLRCLRLDGNCVGESGLRMLLTALTSRRRRLPALWLRRQRPALVESGAREIIEGAFRDGLFAEVEFERPFEVMGGRSHLALIERTSETEDLGRRARKHPTSHIYI 899
            SKGTSSTERRPPSSGQQPDQ GVGGGRGGVPSS                 DHGDSS  VTK+ETVVDAAKARALGFELWCKNPYTWFSFGEVVLEGGCYALTLAFL KAVALLPSGLHQQEK             GRF DAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQ  YTR+SQSALRVQRAWR HRVIRVLHDLVSKQ AALRIQRFMR+WRK+GFILALRLVATSALEL +LGAKYTKAMGL AQAAAA+RL             AR LIAHRRVSRRK+AIAALQAFCRGCRLRWALSAAFEESLRLE VAHDLRQQRDCGDGGREEGAYTC+E V+P  + EGVGNTDREG+RG  A PLRPRH DGCKPHKE   AGYNAP NVQLGVI RRNFPMD GCAKGFRPPNLAAFLWESRE+AYGS CAD G DDN TL+ PHL  ETESPRSYVD+A ARSSHGDDGAVFEASATAVASSACRED VRMGSE+NEVDLGDC   QHGGGRPPAF+ELPASPVS LPLLQPPRWVPATVAPEGAFHRALACSTLIV+SPSFDS+SARRLFSRMGKP+PAASPPRDEPQQEADDVKGMAAGVRRG+AD NPTH EEK   R KKHP GCLHANGLKH+LL+GESPIGDGGLSELSSA+RCGWLPRLTTLVIGGPGCKVGPRGVAALA ALSTSGCSQLQHLSMSNCC GR K+XXXXXXXGCKT LLN  SVSAEKAAAEAHAAWDCFFRHLQRLPSL TLSIQDAGLENRDVRS+SIA+QILPADRLRCLRL+GNCVGESGLRMLLTALTSRRRRLPALWLRRQRPALVESGAR+I EGAFRDGLFAEVEFERPFEVMGGRSHLALIE T+ETEDLGRRA KHPTSHIYI
Sbjct:  269 SKGTSSTERRPPSSGQQPDQQGVGGGRGGVPSSLPSTADSSCLGRGGGRGDHGDSSCGVTKKETVVDAAKARALGFELWCKNPYTWFSFGEVVLEGGCYALTLAFLAKAVALLPSGLHQQEK-------------GRFGDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQ--YTRESQSALRVQRAWRGHRVIRVLHDLVSKQTAALRIQRFMREWRKHGFILALRLVATSALELSKLGAKYTKAMGLAAQAAAADRLQALTASAEAVQRAARVLIAHRRVSRRKEAIAALQAFCRGCRLRWALSAAFEESLRLEYVAHDLRQQRDCGDGGREEGAYTCEEGVEPGPDREGVGNTDREGKRGPSAAPLRPRHGDGCKPHKEEAFAGYNAPLNVQLGVIARRNFPMDAGCAKGFRPPNLAAFLWESREEAYGSCCADDGTDDNPTLLVPHLGNETESPRSYVDSA-ARSSHGDDGAVFEASATAVASSACREDPVRMGSEQNEVDLGDCSPDQHGGGRPPAFDELPASPVSPLPLLQPPRWVPATVAPEGAFHRALACSTLIVNSPSFDSSSARRLFSRMGKPIPAASPPRDEPQQEADDVKGMAAGVRRGKADLNPTHGEEKEKRRLKKHP-GCLHANGLKHVLLVGESPIGDGGLSELSSAVRCGWLPRLTTLVIGGPGCKVGPRGVAALATALSTSGCSQLQHLSMSNCCLGRQKQXXXXXXXGCKTSLLNPASVSAEKAAAEAHAAWDCFFRHLQRLPSLATLSIQDAGLENRDVRSLSIALQILPADRLRCLRLNGNCVGESGLRMLLTALTSRRRRLPALWLRRQRPALVESGARDIFEGAFRDGLFAEVEFERPFEVMGGRSHLALIECTTETEDLGRRALKHPTSHIYI 1153          
BLAST of mRNA_Ecto-sp13_S_contig5593.15910.1 vs. uniprot
Match: A0A6H5JP04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP04_9PHAE)

HSP 1 Score: 1369 bits (3544), Expect = 0.000e+0
Identity = 732/905 (80.88%), Postives = 758/905 (83.76%), Query Frame = 0
Query:   56 SGDVTKQETVVDAAKARALGFELWCKNPYTWFSFGEVVLEGGCYALTLAFLVKAVALLPSGLHQQEKASLTRKRRLILRFGRFSDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQARYTRDSQSALRVQRAWRRHRVIRVLHDLVSKQIAALRIQRFMRKWRKNGFILALRLVATSALELRQ----------------------------------LGAKYTKAMGLTAQAAAANRLXXXXXXXXXXXXXARALIAHRRVSRRKQAIAALQAFCRGCRLRWALSAAFEESLRLESVAHDLRQQRDCGDGGREEGAYTCKEVVQPSLNPEGVGNTDREGRRGLLATPLRPRHWDGCKPHKETLAGYNAPPNVQLGVITRRNFPMDVGCAKGFRPPNLAAFLWESREDAYGSRCADHGADDNKTLVAPHLSKETESPRSYVDTAVARSSHGDDGAVFEASATAVASSACREDLVRMGSERNEVDLGDCLSGQHGGGRPPAFEELPASPVSALPLLQPPRWVPATVAPEGAFHRALACSTLIVSSPSFDSASARRLFSRMGKPMPAASPPRDEPQQEADDVKGMAAGVRRGQADRNPTHREEKGRPKKHPTGCLHANGLKHILLLGESPIGDGGLSELSSAMRCGWLPRLTTLVIGGPGCKVGPRGVAALAKALSTSGCSQLQHLSMSNCCRGRPKRXXXXXXXGCKTWLLNLTSVSAEKAAAEAHAAWDCFFRHLQRLPSLTTLSIQDAGLENRDVRSMSIAMQILPADRLRCLRLDGNCVGESGLRMLLTALTSRRRRLPALWLRRQRPALVESGAREIIEGAFRDGLFAEV---------------------------EFERPFEVMGGRSHLALIERTSETEDLGRRARKHPTSHIYI 899
            SG VTK +T+VDAAKARALGFELWCKNPYTWF++GEVVLEGGCYALTLAFL KAVALLPSGL QQEK             GRF DAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQARYTR+SQSALRVQRAWR HRVIRVL DLVSKQIAA RIQRFMR+WRK+GFILALRL A SALELRQ                                  LG  YTKAMGLTAQAAAA+RL             ARALIAHRRVSRRK+AIAALQAF RGCRLRWALSAAFEESLR+ESVA DLRQQRDCGDGGREEGA+TC+E V+P L+PEGVGNTDREG+RGL AT LRPRH DGCKPHK+T  GYNAPPNVQLGVITRRN PMDV CAKGFRPPNLAAFLWESREDAYGSRCAD GADDN  L+APHL KE ESPRSYVD AVARSSHG D AVF ASATAVASSACREDL RMGSE+NEVDLGDCLS QHGGGRPPAF+ELPASPVSALPLLQPPRWVPATVAPEGAFHRALACSTLIVSSPSFDSASARRLFSRMGKPMPAASPPRDEPQQE DDVKGMAAGVRRGQ D N TH EEK R  KHPTGCL+ANGL+HILLLGESPIGDGGLSELSSA+RCGWLPRLTTLVIGGPGCKVGPRGVAALA ALSTSGCSQLQHLSMSNCC GRPK   XXXXX       NL SVSAEKAAAEAHAAWDCFFRHLQRLPSL TLSIQDAGLENRDVRS+SIA+QILPADRLRCLRL+GNCVGESGLRMLLTAL SRRRRLPALWLRRQRPALVESGAREI E AFRDGLFAEV                           EFERPFEVMGGRSHLALIERT+ETEDLGRRA KHPTSHIYI
Sbjct:  319 SGGVTKNKTIVDAAKARALGFELWCKNPYTWFNYGEVVLEGGCYALTLAFLAKAVALLPSGLLQQEK-------------GRFGDAHSAAEEARDLDPFGKAVRLLCPRLMALHSVDARCQARYTRESQSALRVQRAWRGHRVIRVLRDLVSKQIAAFRIQRFMREWRKHGFILALRLAAISALELRQVVRRRRSRSWVWHERRAAWVDGEATLARIHAPPKLGTNYTKAMGLTAQAAAADRLQALAASAEAVQRAARALIAHRRVSRRKEAIAALQAFFRGCRLRWALSAAFEESLRIESVARDLRQQRDCGDGGREEGAHTCEEGVKPGLDPEGVGNTDREGKRGLSATSLRPRHGDGCKPHKDTFGGYNAPPNVQLGVITRRNLPMDVSCAKGFRPPNLAAFLWESREDAYGSRCADDGADDNTALLAPHLGKEKESPRSYVDAAVARSSHGHDHAVFVASATAVASSACREDLARMGSEQNEVDLGDCLSDQHGGGRPPAFDELPASPVSALPLLQPPRWVPATVAPEGAFHRALACSTLIVSSPSFDSASARRLFSRMGKPMPAASPPRDEPQQETDDVKGMAAGVRRGQVDLNLTHGEEKERLIKHPTGCLYANGLEHILLLGESPIGDGGLSELSSAVRCGWLPRLTTLVIGGPGCKVGPRGVAALATALSTSGCSQLQHLSMSNCCLGRPKGRRXXXXXXXXXXXSNLASVSAEKAAAEAHAAWDCFFRHLQRLPSLATLSIQDAGLENRDVRSLSIALQILPADRLRCLRLNGNCVGESGLRMLLTALRSRRRRLPALWLRRQRPALVESGAREIFERAFRDGLFAEVKRVPHPMNIERIEGKFRAANRNTWWLVEFERPFEVMGGRSHLALIERTTETEDLGRRALKHPTSHIYI 1210          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5593.15910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW09_ECTSI0.000e+085.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JP04_9PHAE0.000e+080.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 671..700
e-value: 5.5
score: 11.9
coord: 793..820
e-value: 0.78
score: 17.9
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 646..831
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 735..852
e-value: 3.7E-7
score: 31.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 635..722
e-value: 2.0E-7
score: 32.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5593contigEcto-sp13_S_contig5593:3260..9032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5593.15910.1mRNA_Ecto-sp13_S_contig5593.15910.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5593 3260..9032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5593.15910.1 ID=prot_Ecto-sp13_S_contig5593.15910.1|Name=mRNA_Ecto-sp13_S_contig5593.15910.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=900bp
SKGTSSTERRPPSSGQQPDQPGVGGGRGGVPSSLPSTADSSSLGRGGGRG
DHGDSSGDVTKQETVVDAAKARALGFELWCKNPYTWFSFGEVVLEGGCYA
LTLAFLVKAVALLPSGLHQQEKASLTRKRRLILRFGRFSDAHSAAEEARD
LDPFGKAVRLLCPRLMALHSVDARCQARYTRDSQSALRVQRAWRRHRVIR
VLHDLVSKQIAALRIQRFMRKWRKNGFILALRLVATSALELRQLGAKYTK
AMGLTAQAAAANRLQALAASAEAVQRAARALIAHRRVSRRKQAIAALQAF
CRGCRLRWALSAAFEESLRLESVAHDLRQQRDCGDGGREEGAYTCKEVVQ
PSLNPEGVGNTDREGRRGLLATPLRPRHWDGCKPHKETLAGYNAPPNVQL
GVITRRNFPMDVGCAKGFRPPNLAAFLWESREDAYGSRCADHGADDNKTL
VAPHLSKETESPRSYVDTAVARSSHGDDGAVFEASATAVASSACREDLVR
MGSERNEVDLGDCLSGQHGGGRPPAFEELPASPVSALPLLQPPRWVPATV
APEGAFHRALACSTLIVSSPSFDSASARRLFSRMGKPMPAASPPRDEPQQ
EADDVKGMAAGVRRGQADRNPTHREEKGRPKKHPTGCLHANGLKHILLLG
ESPIGDGGLSELSSAMRCGWLPRLTTLVIGGPGCKVGPRGVAALAKALST
SGCSQLQHLSMSNCCRGRPKRRRRRHHHGCKTWLLNLTSVSAEKAAAEAH
AAWDCFFRHLQRLPSLTTLSIQDAGLENRDVRSMSIAMQILPADRLRCLR
LDGNCVGESGLRMLLTALTSRRRRLPALWLRRQRPALVESGAREIIEGAF
RDGLFAEVEFERPFEVMGGRSHLALIERTSETEDLGRRARKHPTSHIYI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf