prot_Ecto-sp13_S_contig55465.15834.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig55465.15834.1
Unique Nameprot_Ecto-sp13_S_contig55465.15834.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length63
Homology
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: A0A6H5L3C1_9PHAE (2'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3C1_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 4.800e-25
Identity = 48/54 (88.89%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    1 MEVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGLL 54
            MEVIEFPTVLLDAHSLK+LDEFRVYVRPVRHPVLTPFCTSLTGIEQ  ++GG+L
Sbjct:  376 MEVIEFPTVLLDAHSLKVLDEFRVYVRPVRHPVLTPFCTSLTGIEQSTVDGGVL 429          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: D7FZZ0_ECTSI (2'-phosphotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ0_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 5.840e-25
Identity = 47/54 (87.04%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    1 MEVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGLL 54
            MEVIEFPTVLLDAHSLK+LDEFRVYVRPVRHP+LTPFCTSLTGIEQ  ++GG+L
Sbjct:  334 MEVIEFPTVLLDAHSLKVLDEFRVYVRPVRHPILTPFCTSLTGIEQSTVDGGVL 387          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: A0A8J9Y2N5_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9Y2N5_BRAAE)

HSP 1 Score: 72.0 bits (175), Expect = 6.500e-14
Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    2 EVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGL 53
            EVIEFP VL D  + KI+DEF+ YVRP   P LTP+CT LTGIEQ++++ G+
Sbjct:   30 EVIEFPCVLYDVKNSKIIDEFQQYVRPSEKPELTPYCTDLTGIEQLQVDNGV 81          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: A0A0D2X2L2_CAPO3 (Exonuclease domain-containing protein n=3 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X2L2_CAPO3)

HSP 1 Score: 72.4 bits (176), Expect = 9.900e-14
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:    2 EVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEG 51
            E+IEFPTV+LD  +L+I+  F  YVRPV HP+LTPFCT+LTGI Q  + G
Sbjct:   68 EIIEFPTVVLDTTTLEIVGSFHKYVRPVSHPILTPFCTTLTGITQDMVSG 117          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: A0A6J1TB80_FRAOC (ERI1 exoribonuclease 3-like isoform X1 n=2 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TB80_FRAOC)

HSP 1 Score: 71.2 bits (173), Expect = 2.290e-13
Identity = 29/53 (54.72%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    1 MEVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGL 53
            MEVIEFP + +D+ + + L +F +YVRPV+HP+LTPFC +LTGI Q  ++G L
Sbjct:   72 MEVIEFPCLKIDSSTFETLGKFHIYVRPVKHPLLTPFCVNLTGISQEMVDGQL 124          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: UPI0014222570 (exonuclease domain-containing protein n=5 Tax=Massilia TaxID=149698 RepID=UPI0014222570)

HSP 1 Score: 69.3 bits (168), Expect = 4.440e-13
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    1 MEVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGLL 54
            ME+IE   V++D  SL ++DEF+ ++RPVRHP LTPFCT+LT IEQ  ++   L
Sbjct:   26 MEIIEIGAVMVDGASLAVVDEFQTFIRPVRHPQLTPFCTTLTSIEQKDVDSAPL 79          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: A0A6C2DRN8_9CYAN (Exonuclease domain-containing protein n=1 Tax=Pseudanabaena sp. UWO310 TaxID=2480795 RepID=A0A6C2DRN8_9CYAN)

HSP 1 Score: 69.3 bits (168), Expect = 4.600e-13
Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 MEVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGLL 54
            ME+IE   V+++A  L+I+DEF+ +VRPVRHP LTPFCT LT I+Q+ ++   L
Sbjct:   26 MEIIEIGAVMVEAQELQIIDEFQSFVRPVRHPNLTPFCTKLTSIQQIDVDDAPL 79          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: A0A7S3Y172_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y172_HETAK)

HSP 1 Score: 70.5 bits (171), Expect = 5.350e-13
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:    2 EVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGLLVFSRVHI 61
            E+IEFPTVL+DA +LK++ EF+ YVRPV HP L+ FC SLTGI+Q  ++   +      +
Sbjct:   93 EIIEFPTVLVDARTLKVVSEFQTYVRPVHHPNLSGFCISLTGIQQEWVDQAPIFIEAFEL 152          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: A0A6J2VSV9_CHACN (ERI1 exoribonuclease 2 n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VSV9_CHACN)

HSP 1 Score: 71.2 bits (173), Expect = 6.050e-13
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0
Query:    2 EVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGLLVFSRVHIC 62
            E+IEFP VLL+  S +I  EF  YV+P  HPVL+ FCT LTGI Q ++EGG+     +HIC
Sbjct:   56 EIIEFPAVLLNTSSGEIESEFHTYVQPQEHPVLSGFCTELTGISQTQVEGGV----PLHIC 112          
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Match: A0A2D2DLL9_9BURK (Exonuclease n=1 Tax=Massilia violaceinigra TaxID=2045208 RepID=A0A2D2DLL9_9BURK)

HSP 1 Score: 68.9 bits (167), Expect = 6.250e-13
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    1 MEVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIEGGLL 54
            ME+IE   V++D  SL ++DEF+ ++RPVRHPVL PFCT+LT IEQ  ++   L
Sbjct:   26 MEIIEIGAVMVDGASLAVVDEFQSFIRPVRHPVLAPFCTTLTSIEQKDVDSAPL 79          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55465.15834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L3C1_9PHAE4.800e-2588.892'-phosphotransferase n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7FZZ0_ECTSI5.840e-2587.042'-phosphotransferase n=1 Tax=Ectocarpus siliculos... [more]
A0A8J9Y2N5_BRAAE6.500e-1459.62Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
A0A0D2X2L2_CAPO39.900e-1462.00Exonuclease domain-containing protein n=3 Tax=Caps... [more]
A0A6J1TB80_FRAOC2.290e-1354.72ERI1 exoribonuclease 3-like isoform X1 n=2 Tax=Fra... [more]
UPI00142225704.440e-1353.70exonuclease domain-containing protein n=5 Tax=Mass... [more]
A0A6C2DRN8_9CYAN4.600e-1353.70Exonuclease domain-containing protein n=1 Tax=Pseu... [more]
A0A7S3Y172_HETAK5.350e-1350.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6J2VSV9_CHACN6.050e-1354.10ERI1 exoribonuclease 2 n=1 Tax=Chanos chanos TaxID... [more]
A0A2D2DLL9_9BURK6.250e-1353.70Exonuclease n=1 Tax=Massilia violaceinigra TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..54
e-value: 5.4E-18
score: 67.2
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 2..49
e-value: 1.4E-7
score: 32.3
NoneNo IPR availablePANTHERPTHR230443'-5' EXONUCLEASE ERI1-RELATEDcoord: 2..54
NoneNo IPR availablePANTHERPTHR23044:SF37ERI1 EXORIBONUCLEASE 2coord: 2..54
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 2..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig55465contigEcto-sp13_S_contig55465:158..346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig55465.15834.1mRNA_Ecto-sp13_S_contig55465.15834.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig55465 158..370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig55465.15834.1 ID=prot_Ecto-sp13_S_contig55465.15834.1|Name=mRNA_Ecto-sp13_S_contig55465.15834.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=63bp
MEVIEFPTVLLDAHSLKILDEFRVYVRPVRHPVLTPFCTSLTGIEQVRIE
GGLLVFSRVHIC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR012337RNaseH-like_sf