prot_Ecto-sp13_S_contig5530.15807.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig5530.15807.1
Unique Name	prot_Ecto-sp13_S_contig5530.15807.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	1059

Homology

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BLAST of mRNA_Ecto-sp13_S_contig5530.15807.1 vs. uniprot
Match: D8LB75_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB75_ECTSI)

HSP 1 Score: 1801 bits (4664), Expect = 0.000e+0
Identity = 979/1054 (92.88%), Postives = 994/1054 (94.31%), Query Frame = 0

Query:    1 MIGSVIVLCIVGFVLWLLLNAGTGFAATKLEFLEPDAPDSSHGGPGERSRLRVRYGPLSLRAKHVLLAEKSLKIVSGFLIGLYPVDVTQFIKAWWKREERERLEPKLIIRLVGVRVAIKGNGIDDWEKQAEAMAAGIEGGNHNQANLLTALIDKTTPEEGVPPSYIFRLVDAVINAVDVEVEGFHLSLASANHKDTPKEGTQPQQQDASDIRPEAAAAXXXXXXXXSGTASGSHCVGCEWVLGVKFDRFRLCKKAHPSDETLGVTPRTLKVKSFNMYYDTDGTPVRGRSSFNKPDNQQRESVGSPPPAASGATAVVREENDPELYIEDGALPLTSGILGXXXXXXXXXDGLRQPDDHNSLLMVESIGGTLLFPDLMCVLLGVGRQPGGKGKILAVDFDQMRGVVVELEPFQVFSLLNDALPLLAMMGPYAEWCSNARLQWHKEAFARRPGAAA-GGVPVTPEELEKYAEALGSLPDGDGEKKYKGDAAELRKLDKNMSLSQIMLTRMRVRNWDATRPERVMLVANLLLNSIDPFQGVPAEDLEGTLVSEPEGAAAGDGGGGAESDEEAPSISSGQSEAPLPSLPTDGPEEDDRLEALLYYAAQESAYAGAENPVLMEIDVRMSAQDVSLLVYHPPYDKNKSADKNKASSREVDLGQGGDDNDSIFAGSSDGGDDGSLPEMDQLSRQHSGGSVKLGGDDGELATEEALRLRDSLQLPALAASVAINDFKFGFNMLMGSVAAEAATTPCAEGAGEGGPSXXXXXXXXXXXXXXXXXXXXPEEEGPVQLHTFSGALFPDALPIRLYKPSRLGQGADLRIESYGDNDKVGDGVAGMNLSLVLGGTRVTDFGALEEGGVLPTLIGGPAAVSAGGDGDDSHAAGGTTKATLALFVGGRLEAGLDFQSCTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEEEEEATGGAGTTEVVDARWKAIDKDSRDARTNVVMAQCSALTLDMKSGSAFEALAVSVYDFSVAPCVQRPEASDAAIVSCGRLHETGVAIALRGPLPELLEVIHRGLPLK 1053
            MIGSVIVLCIVGFVLWLLLNAGTGFAATKLEFLEPDAPDSSHGGPGERSRLRVRYGPLSLRAKHVLLAEKSLKIVSGFL+GLYPVDVTQFIKAWWKREERERLEPKLIIRLVGVRVAIKGNGIDDWEKQAEAMAAGIEG NHNQANLLTALIDKTTPEEGVPPS+IFRLVDAVINAVDVEVEGFHLSLASANHKDTP+EGTQP+QQDAS IRP  AAAXXXXXXXX G AS SH VG EWVLGVKFDRFRLCKKAHPSDETLGVTPRTLKVKSFNMYYDTDGTPVR RSSFNKP NQQR SVGSPPPAA GATAVVR ++DPELYIEDGA PLTSG+LG         DGLRQPDDHNSLLMVESIGGTLLFPDLMCVLLGVGRQPGGKGKILAVDFDQMRGVVVELEPFQVFSLLNDALPLLA+MGPYAEWCSNARLQWHKEAFARRPGAAA GGVP TPEELEKYAEALGSLPDGDGEKKYKGDAAELRKLDKNMSLSQIMLTRMRVRNWDATRPERVMLVANLLLNSIDPFQGVP           PEGAAAGDG   AESDEEAPSISSGQSEAPLPSLPTDGPEED RLEALLYYAAQESAYAGAENPVLMEID+RMSAQDVSLLVYHPP D NKSA K+KASSREVDLGQGGDDNDSIFAGSSDGGDDGSLPEMDQLSRQHSGGSVKLGGDDGELATEEALRLRDSLQLPALAASVAINDFKFGFNMLMGSVAAEAATTPCAEGAGEG        XXXXXXXXXXXXXXXPEEEGPVQLHTFSG LFPDALPIRLYKPSRLGQGADLR+ES+GDND+VGDGVAGM+LSLVLGGTRVTDFGALE+GGVLPTLIGGPAAVSA GDGDDSHAAGGTTKATLALFVGGRLEAGLDFQSCTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEE  EATGG GTTEVVDARWKAIDKDSRDARTNVVMAQCSAL LDMKSGSAFEALAVSV DFSVAPCVQRPEASDAAIVSCGRLHETGVAIALRGPLPELLEVIHRG PLK
Sbjct:    1 MIGSVIVLCIVGFVLWLLLNAGTGFAATKLEFLEPDAPDSSHGGPGERSRLRVRYGPLSLRAKHVLLAEKSLKIVSGFLVGLYPVDVTQFIKAWWKREERERLEPKLIIRLVGVRVAIKGNGIDDWEKQAEAMAAGIEGVNHNQANLLTALIDKTTPEEGVPPSHIFRLVDAVINAVDVEVEGFHLSLASANHKDTPEEGTQPEQQDASGIRP--AAAXXXXXXXXGGIASSSHGVGSEWVLGVKFDRFRLCKKAHPSDETLGVTPRTLKVKSFNMYYDTDGTPVRRRSSFNKPHNQQRASVGSPPPAAPGATAVVRGDDDPELYIEDGASPLTSGVLGGRDGG----DGLRQPDDHNSLLMVESIGGTLLFPDLMCVLLGVGRQPGGKGKILAVDFDQMRGVVVELEPFQVFSLLNDALPLLALMGPYAEWCSNARLQWHKEAFARRPGAAAAGGVPATPEELEKYAEALGSLPDGDGEKKYKGDAAELRKLDKNMSLSQIMLTRMRVRNWDATRPERVMLVANLLLNSIDPFQGVP-----------PEGAAAGDGXXXAESDEEAPSISSGQSEAPLPSLPTDGPEEDTRLEALLYYAAQESAYAGAENPVLMEIDIRMSAQDVSLLVYHPPCDNNKSAGKSKASSREVDLGQGGDDNDSIFAGSSDGGDDGSLPEMDQLSRQHSGGSVKLGGDDGELATEEALRLRDSLQLPALAASVAINDFKFGFNMLMGSVAAEAATTPCAEGAGEG--------XXXXXXXXXXXXXXXPEEEGPVQLHTFSGTLFPDALPIRLYKPSRLGQGADLRVESFGDNDEVGDGVAGMSLSLVLGGTRVTDFGALEDGGVLPTLIGGPAAVSAAGDGDDSHAAGGTTKATLALFVGGRLEAGLDFQSCTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEEXXEATGGVGTTEVVDARWKAIDKDSRDARTNVVMAQCSALALDMKSGSAFEALAVSVCDFSVAPCVQRPEASDAAIVSCGRLHETGVAIALRGPLPELLEVIHRGFPLK 1029

[Close]

BLAST of mRNA_Ecto-sp13_S_contig5530.15807.1 vs. uniprot
Match: A0A6H5K9E5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E5_9PHAE)

HSP 1 Score: 1791 bits (4638), Expect = 0.000e+0
Identity = 982/1097 (89.52%), Postives = 1001/1097 (91.25%), Query Frame = 0

Query:    1 MIGSVIVLCIVGFVLWLLLNAGTGFAATKLEFLEPDAPDSSHGGPGERSRLRVRYGPLSLRAKHVLLAEKSLKIVSGFLIGLYPVDVTQ----------------FIKAWWKREERERLEPKLIIRLVGVRVAIKGNGIDDWEKQAEAMAAGIEGGNHNQANLLTALIDKTTPEEGVPPSYIFRLVDAVINAVDVEVEGFHLSLASANHKDTPKEGTQPQQQDASDIRPEAAAAXXXXXXXXSGTASGSHCVGCEWVLGVKFDRFRLCKKAHPSDETLGVTPRTLKVKSFNMYYDTDGTPVRGRSSFNKPDNQQRESVGSPPPAASGATAVVREENDPELYIEDGALPLTSGILGXXXXXXXXXDGLRQPDDHNSLLMVESIGGTLLFPDLMCVLLGVGRQPGGKGKILAVDFDQMRGVVVELEPFQVFSLLNDALPLLAMMGPYAEWCSNARLQWHKEAFARRPGAAAGGVPVTPEELEKYAEALGSLPDGDGEKKYKGDAAELRKLDKNMSLSQIMLTRMRVRNWDATRPERVMLVANLLLNSIDPFQGVPAEDLEGTLVSEPEGAAAGDGGGGAESDEEAPSISSGQSEAPLPSLPTDGPEEDDRLEALLYYAAQESAYAGAENPVLMEIDVRMSAQDVSLLVYHPPYDKNKSADKNKASSREVDLGQGGDDNDSIFAGSSDGGDDGSLPEMDQLSRQHSGGSVKLGGDDGELATEEALRLRDSLQLPALAASVAINDFKFGFNMLMGSVAAEAATTPCAEGAGEGGPSXXXXXXXXXXXXXXXXXXXXPEEEGPVQLHTFSGALFPDALPIRLYKPSRLGQGADLRIESYGDNDKVGDGVAGMNLSLVLGGTRVTDFGALEEGGVLPTLIGGPAAVSAGGDGDDSHAAGGTTKATLALFVGGRLEAGLDFQSCTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEEEEEATGGAGTTEVVDARWKAIDK----------------------------DSRDARTNVVMAQCSALTLDMKSGSAFEALAVSVYDFSVAPCVQRPEASDAAIVSCGRLHETGVAIALRGPLPELLEVIHRGLPLK 1053
            MIGSVIVLCIVGFVLWLLLNAGTGFAATKLEFLEP+APDSS GGPGERSRLRVRYGPLSLRAKHVLLAEKSLKIVSGFL+GLYPVDVTQ                FIKAWWKREERERLEPKLIIRLVGVRVAIKGNGIDDWEKQAEAMAAGIEGGNHNQANLLTALIDKTTPEEGVPPS+IFRLVD VINAVDVEVEGFHLSL+SANHKDTP+EGTQPQQQDASDIRP  AAA        SGTASGSH VGCEWVLGVKFDRFRLCKKAHPSDETLGVTPRTLKVKSFNMYYDTDGTPVRG SSFNKP NQQRESV SPPPAASGA AVVR ++DPELYIE+GALPLTSG+LG XXXX    DGLRQPDDHNSLLMVESIGGTLLFPDLMCVLLGVGRQPGGKGKILAVDFDQMRGVVVELEPFQVFSLLNDALPLLA+MGPY+EWCSNARL WHKEAFARRPGAAAGGVPVTPEELEKYAEALGSLPDG+GEKKYKGDAAELRKLDKNMSLSQIMLTRMRVRNWDATRPERVMLVANLLLNSIDPFQGVPAE+LEGT  SEP G AAGDGGGGAESDEEAPSISSGQSEAPLPSLPTDGPEED RLEALLYYAAQESAYAGAENPVLMEID+RMSAQDVSLLVYHPP D  KSADKNKASSREVDLGQGGDDNDSIFAGSSDGGDDGSLPEMDQLSRQHSGGSVKLGGDDGELATEEALRLRDSLQLPALAASVAINDFKFGFNMLMGSVAAEAA  PCAE        XXXXXXXXXXXXXXXXXXXXPEEEGPVQL+TFSGALFPDALPIRLYKPSRLGQGADLR+ES+GDNDKVGDGVAGM+LSLVLGGTRVTDFGALE+GGVLPTLIGGPAAVSA GDGD SHAAGGTTKATLALFVGGRLEAGLDFQSCTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEE  EATGG GTTEVVDARWKAIDK                            DSRDARTNVVMAQCSAL LDMKSGSAFEALAVSV DFSVAPCVQR EASDAAIVSCGRLHETGVAIALRGP PELLEVIHRG PLK
Sbjct:    1 MIGSVIVLCIVGFVLWLLLNAGTGFAATKLEFLEPNAPDSSQGGPGERSRLRVRYGPLSLRAKHVLLAEKSLKIVSGFLVGLYPVDVTQVRVDEYRVHFGWGLIKFIKAWWKREERERLEPKLIIRLVGVRVAIKGNGIDDWEKQAEAMAAGIEGGNHNQANLLTALIDKTTPEEGVPPSHIFRLVDGVINAVDVEVEGFHLSLSSANHKDTPEEGTQPQQQDASDIRPATAAAAPAAS---SGTASGSHGVGCEWVLGVKFDRFRLCKKAHPSDETLGVTPRTLKVKSFNMYYDTDGTPVRGHSSFNKPHNQQRESVRSPPPAASGANAVVRGDDDPELYIEEGALPLTSGVLGGXXXX----DGLRQPDDHNSLLMVESIGGTLLFPDLMCVLLGVGRQPGGKGKILAVDFDQMRGVVVELEPFQVFSLLNDALPLLALMGPYSEWCSNARLHWHKEAFARRPGAAAGGVPVTPEELEKYAEALGSLPDGNGEKKYKGDAAELRKLDKNMSLSQIMLTRMRVRNWDATRPERVMLVANLLLNSIDPFQGVPAEELEGTPASEPVGEAAGDGGGGAESDEEAPSISSGQSEAPLPSLPTDGPEEDARLEALLYYAAQESAYAGAENPVLMEIDIRMSAQDVSLLVYHPPCDNAKSADKNKASSREVDLGQGGDDNDSIFAGSSDGGDDGSLPEMDQLSRQHSGGSVKLGGDDGELATEEALRLRDSLQLPALAASVAINDFKFGFNMLMGSVAAEAAAAPCAEXXXXX--XXXXXXXXXXXXXXXXXXXXXPEEEGPVQLYTFSGALFPDALPIRLYKPSRLGQGADLRVESFGDNDKVGDGVAGMSLSLVLGGTRVTDFGALEDGGVLPTLIGGPAAVSAAGDGDGSHAAGGTTKATLALFVGGRLEAGLDFQSCTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEEXXEATGGVGTTEVVDARWKAIDKVRGAYLFLGRLDARFSVRVDAFSLILPQDSRDARTNVVMAQCSALVLDMKSGSAFEALAVSVCDFSVAPCVQRLEASDAAIVSCGRLHETGVAIALRGPQPELLEVIHRGFPLK 1088

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig5530.15807.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig5530.15807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LB75_ECTSI	0.000e+0	92.88	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K9E5_9PHAE	0.000e+0	89.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 926..948
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..1058
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig5530	contig	Ecto-sp13_S_contig5530:432..5421 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig5530.15807.1	mRNA_Ecto-sp13_S_contig5530.15807.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig5530 432..5421 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig5530.15807.1 ID=prot_Ecto-sp13_S_contig5530.15807.1|Name=mRNA_Ecto-sp13_S_contig5530.15807.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1059bp
MIGSVIVLCIVGFVLWLLLNAGTGFAATKLEFLEPDAPDSSHGGPGERSR
LRVRYGPLSLRAKHVLLAEKSLKIVSGFLIGLYPVDVTQFIKAWWKREER
ERLEPKLIIRLVGVRVAIKGNGIDDWEKQAEAMAAGIEGGNHNQANLLTA
LIDKTTPEEGVPPSYIFRLVDAVINAVDVEVEGFHLSLASANHKDTPKEG
TQPQQQDASDIRPEAAAAAAAAPAASSGTASGSHCVGCEWVLGVKFDRFR
LCKKAHPSDETLGVTPRTLKVKSFNMYYDTDGTPVRGRSSFNKPDNQQRE
SVGSPPPAASGATAVVREENDPELYIEDGALPLTSGILGGGGGGGGGGDG
LRQPDDHNSLLMVESIGGTLLFPDLMCVLLGVGRQPGGKGKILAVDFDQM
RGVVVELEPFQVFSLLNDALPLLAMMGPYAEWCSNARLQWHKEAFARRPG
AAAGGVPVTPEELEKYAEALGSLPDGDGEKKYKGDAAELRKLDKNMSLSQ
IMLTRMRVRNWDATRPERVMLVANLLLNSIDPFQGVPAEDLEGTLVSEPE
GAAAGDGGGGAESDEEAPSISSGQSEAPLPSLPTDGPEEDDRLEALLYYA
AQESAYAGAENPVLMEIDVRMSAQDVSLLVYHPPYDKNKSADKNKASSRE
VDLGQGGDDNDSIFAGSSDGGDDGSLPEMDQLSRQHSGGSVKLGGDDGEL
ATEEALRLRDSLQLPALAASVAINDFKFGFNMLMGSVAAEAATTPCAEGA
GEGGPSPLPPGDAADAGAGAAAGAGEPEEEGPVQLHTFSGALFPDALPIR
LYKPSRLGQGADLRIESYGDNDKVGDGVAGMNLSLVLGGTRVTDFGALEE
GGVLPTLIGGPAAVSAGGDGDDSHAAGGTTKATLALFVGGRLEAGLDFQS
CTVVALPGRIMAIIDVVLACLMGPPAAREAQELNALEEEVEAEEEEEATG
GAGTTEVVDARWKAIDKDSRDARTNVVMAQCSALTLDMKSGSAFEALAVS
VYDFSVAPCVQRPEASDAAIVSCGRLHETGVAIALRGPLPELLEVIHRGL
PLKVLLYS*