prot_Ecto-sp13_S_contig5528.15802.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5528.15802.1
Unique Nameprot_Ecto-sp13_S_contig5528.15802.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length426
Homology
BLAST of mRNA_Ecto-sp13_S_contig5528.15802.1 vs. uniprot
Match: A0A6H5JGV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV2_9PHAE)

HSP 1 Score: 759 bits (1961), Expect = 1.270e-273
Identity = 397/425 (93.41%), Postives = 405/425 (95.29%), Query Frame = 0
Query:    1 MSAVALQAVFYGKSQFSIRDKAQMTVTTALFMIPTALVFPVLLRKANSPPISGTVTKAGRARHDAPFKENSRRHAQHGVLGHHHPLDKKTPHDEQQPALSMKRSSVVRGTFVTKITLQDPPTFARRRERKPSAFVQPPTVVESIGGVSANKTAVYRDIIMSQRVIVAIYLILPVWMAAIFVPMVILVALEASSSPEGDPNALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLCGAMLFDSDAGLATGAMISGLACLLCSYLTRLQRKNEQVLKGVCEQDLITAWSNPTLDMHSAAAAVQRSFRMHLAATRMARAVEFSTWLNNCKPQRSFMYILVNSIIYVTILCLTYTNLVFAARFDRSTCTDWLTTCVLAVMIEATLQQPVVLLMTGVLGDFVEEGADFLLEVLDF 425
            MSAVALQAVFYGKSQFSIR+KAQMTVTTALFMIPTALVFP LLRKAN+PPIS TV KAGR+RHDAPFKENSRRHAQHGVLGHHHP DK TP DEQQPALS KRSSV+RGT VT ITLQDPPT ARRRERKPSAFVQ PTVVESI GVSANKTAVYRDIIM QRVIVA+ LILPVWMAA+FVPMVILVALEASSSPEGDPNALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLCG MLFDSD  LATGAM+SGLACLLCSYLTRLQRKNE VLKGVCEQDLITAWSNPTLDMHSAAA VQRSFRMHLAATRMARAVEFSTWLNNCKPQRS+MYILVNSIIYVTILCL YTNLVFAARFDRSTCTDWLTTCVLAVMIEATLQQPVVLLMTGVLGDFVEEGADFLLEVLDF
Sbjct:  132 MSAVALQAVFYGKSQFSIRNKAQMTVTTALFMIPTALVFPFLLRKANTPPISETVIKAGRSRHDAPFKENSRRHAQHGVLGHHHPPDKNTPRDEQQPALSTKRSSVIRGTVVTNITLQDPPTLARRRERKPSAFVQSPTVVESISGVSANKTAVYRDIIMWQRVIVALCLILPVWMAAVFVPMVILVALEASSSPEGDPNALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLCGGMLFDSDTALATGAMLSGLACLLCSYLTRLQRKNELVLKGVCEQDLITAWSNPTLDMHSAAAVVQRSFRMHLAATRMARAVEFSTWLNNCKPQRSYMYILVNSIIYVTILCLAYTNLVFAARFDRSTCTDWLTTCVLAVMIEATLQQPVVLLMTGVLGDFVEEGADFLLEVLDF 556          
BLAST of mRNA_Ecto-sp13_S_contig5528.15802.1 vs. uniprot
Match: A0A6H5JVI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI0_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.170e-85
Identity = 175/409 (42.79%), Postives = 220/409 (53.79%), Query Frame = 0
Query:    1 MSAVALQAVFYGKSQFSIRDKAQMTVTTALFMIPTALVFPVLLRKANSPPISGTVTKAGRARHDAPFKENSRRHAQHGVLGHHHPLDKKTPHDEQQPALSMKRSSVVRGTFVTKITLQDPPTFARRRERKPSAFVQPPTVVESIGGVSANKTAVYRDIIMSQRVIVAIYLILPVWMAAIFVPMVILVALEASSSPEGDPNALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLCGAMLFDSDAGLATGAMISGLACLLCSYLTRLQRKNEQVLKGVCEQDLITAWSNPTLDMHSAAAAVQRSFR---------------------------------MHLAATRMARAVEFSTWLNNCKPQRSFMYILVNSIIYVTILCLTYTNLVFAARFDR 376
            MSAV LQA+FYGKSQFSIR+KA+MT  TALFMIPTALVFP ++R AN+PP S T+T+              R+H              KT H +QQP    K+    R   V           A+R E            +  + G                                   P V  V  EA  +P G+ NA +HN+TASLGI+C+LLC  SAYGV AHRV  M++AM FQA++AP LVLCGA+L+ S  GLATGA+  GL  L+C+Y  R+ R+ E V++ VCE DLITAWS+P   MHSA   VQ+++R                                 +H A TR AR VEF+TWLN CK +RS M++LVNS++YV ILCLTYTNLVFA +FDR
Sbjct:    1 MSAVTLQAIFYGKSQFSIREKAEMTAATALFMIPTALVFPAMMRLANTPPSSETLTRV-------------RKH--------------KTAH-KQQPQGGNKQLMSQRDRLVK----------AQREEFH--------AALSDVTG-----------------------------------PQVFRVMGEAEKAPGGNQNARLHNVTASLGILCTLLCAVSAYGVAAHRVTIMSQAMVFQAVLAPALVLCGAILYGSSVGLATGAVFGGLGTLVCAYFLRVHRRIELVVRKVCEDDLITAWSHPVPSMHSAVLRVQQAYRGFLLSAYHYCTSFIESTVGDNLVLNLGCTTLTRIHRAMTRTARIVEFTTWLNKCKRRRSVMHMLVNSVVYVVILCLTYTNLVFAIKFDR 328          
BLAST of mRNA_Ecto-sp13_S_contig5528.15802.1 vs. uniprot
Match: D7G0E0_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0E0_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 3.690e-66
Identity = 113/187 (60.43%), Postives = 139/187 (74.33%), Query Frame = 0
Query:  190 EASSSPEGDPNALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLCGAMLFDSDAGLATGAMISGLACLLCSYLTRLQRKNEQVLKGVCEQDLITAWSNPTLDMHSAAAAVQRSFRMHLAATRMARAVEFSTWLNNCKPQRSFMYILVNSIIYVTILCLTYTNLVFAARFDR 376
            EA     G+    +HNLTASLGI C LLC++SAYGV  HRV  M++AMA QA++ P LVLCGA+LF SD GLATGA+  GL  LLC+Y   + RKNE V++ VC++DLIT WS+P   MHSAA  VQR+FRMH AA R  RA+EF+TWL+ CK  RS MY+ +NS++YV ILCLTY NLVFA +FDR
Sbjct:  437 EAEGDAGGNQEEFLHNLTASLGIACGLLCLFSAYGVVTHRVTIMSQAMAAQAVITPALVLCGAVLFGSDIGLATGAVFGGLGTLLCAYFLNMHRKNELVVQRVCQEDLITTWSHPLPFMHSAALPVQRAFRMHRAAKRTTRAIEFNTWLHECKHGRSVMYVCLNSLVYVVILCLTYANLVFAIKFDR 623          
BLAST of mRNA_Ecto-sp13_S_contig5528.15802.1 vs. uniprot
Match: A0A6H5JCS7_9PHAE (REJ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS7_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 2.720e-60
Identity = 152/460 (33.04%), Postives = 223/460 (48.48%), Query Frame = 0
Query:    1 MSAVALQAVFYGKSQFSIRDKAQMTVTTALFMIPTALVFPVLLRKANSPPISGTVTKAGRARHDAPFKENSRRHAQHGVLGHHHPLDKKTPHDEQQPALSMKRSSVVRGTFVTKITLQDPPTFARRRERK---------PSAFVQPPTVVESIGGVSANKTAV---YRDIIMSQRVIVAIYLILPVWMAAI-----FVPMVI-------------------------------LVALEAS------------SSPE------------------------GDPNALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLCGAMLFDSDAGLATGAMISGLACLLCSYLTRLQRKNEQVLKGVCEQDLITAWSNPTLDMHSAAAAVQRSFRMHLAATRMARAVEFSTWLNNCKPQRSFMYILVNSIIYVTILCLTYTNLVFAARFDR 376
            MSA+ LQA+FYGKSQF +R K +MTV +AL M+PT ++FP LLR  N+PP S T+ +    R + P   N      H +        ++  +D +      +RS  +R +       + P + AR +  +         P     P     S+       T +   +RD++  Q+ ++ +YL LP+ +A +     F P  +                               LV+ + S            SS E                        GD +A +HN+  SL + CS+LC  SA+ V +     M +   FQA+VAPGL LCG +L+ S A +A GA++     L+ SYL  +QRK E +L  + E DL+ AWS PT +MH AA  VQR +R+H A+ RM RA+EF TWL+ C+ QR  M +L +  +Y+TILCL YTN+VFA +FDR
Sbjct:  964 MSAILLQAIFYGKSQFGVRQKVEMTVVSALLMLPTGVIFPALLRAGNTPPASQTLKRVA-VRQEEPAGPN------HDLYDELQRKQEERVNDFRIALQDGERSPSIRASKFRHSLHRTPRSNARGQIHRGGFSAPRDSPPRKTAPTRFSRSMSTSDLKPTGLSNTFRDVVAMQKTLLLVYLPLPMLLAMLVSELLFTPQRLRLPCCMPVQQQGHGHDVTVGDLARNKCNRSALVSWKTSQNDFCSCSAGFTSSSEMKRRYRVLCKWQVLRISGEAEAAGGDEHAFLHNMVTSLSVACSVLCALSAFAVVSRSARIMVQTTTFQAVVAPGLALCGVLLYSSSASIAAGAVLGAAVALVGSYLVGVQRKCEDILNELIEGDLVAAWSQPTREMHKAAEIVQRCYRIHHASVRMTRALEFHTWLHGCRRQRRGMQVLASGALYITILCLIYTNMVFAIKFDR 1416          
BLAST of mRNA_Ecto-sp13_S_contig5528.15802.1 vs. uniprot
Match: D7FJB7_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB7_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.140e-46
Identity = 119/352 (33.81%), Postives = 178/352 (50.57%), Query Frame = 0
Query:    1 MSAVALQAVFYGKSQFSIRDKAQMTVTTALFMIPTALVFPVLLRKANSPPISGTVTKAGRARHDAPFKENSRRHAQHGVLGHHHPLDKKTPHDEQ---QPALSMKRSSVVRGTFVTKITLQDPPT------FARRRERKPSAFVQPPTVVESIGGVSANKTAVYRDIIMSQRVIVAIYLILPVWMAAIFVP----------------------MVILVALEASSSPEGDPNALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLCGAMLFDSDAGLATGAMISGLACLLCSYLTRLQRKNEQVLKGVCEQDLITAWSNPTLDMHSAAAAVQRSFRM 321
            MSA+ LQA+FYGKSQF +R K +MTV +AL M+PT ++FP LLR  N+PP S T+ +        P ++       H +        ++   D +   Q A S  R  + RG F        PP       F     R P+ F        +       +TA YRD++  Q+ ++ +YL LP+ +A +                         +V+ ++ EA ++  GD  A +HN+  SL + CS+LC  SA+ V +     M +   FQA+VAPGL LCG ++++S A +A GA++     L+ SYL  +QRK E +L  + E DL+ AWS PT +MH AA  VQR +R+
Sbjct:  902 MSAILLQAIFYGKSQFGVRKKVEMTVISALLMLPTGVIFPALLRAGNTPPASQTLKRV-------PVRQEEPEGPNHDLYDELQRKQEERVDDFRTALQDARSSAREQMHRGGFSA--PRDSPPRKTAPTRFVANVRRSPNEFY-----FSATNATPVVQTAAYRDVVAMQKTLLLVYLPLPMLLAMLVSEQQGHRHDVTVDDLAQNKCNRSALVLRISREAEAA-GGDEYAFLHNMVTSLSVACSVLCALSAFAVVSRSARIMVQTTTFQAVVAPGLALCGVLMYNSSASIAAGAVLGAAVALVGSYLVGVQRKYEDILNELIEGDLVAAWSQPTREMHMAAEIVQRCYRV 1238          
BLAST of mRNA_Ecto-sp13_S_contig5528.15802.1 vs. uniprot
Match: D7FJB6_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJB6_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.380e-42
Identity = 115/335 (34.33%), Postives = 184/335 (54.93%), Query Frame = 0
Query:    1 MSAVALQAVFYGKSQFSIRDKAQMTVTTALFMIPTALVFPVLLRKANSPPISGTVTKAGRARHDAPFKENSRRHAQHGVLGHHHPLDKKTPHDEQQPALSMKRSSVVRGTFVTKITLQDPPTFARRRERKPSAFVQPPTVVESIGGVS----------ANKTAVYRDIIMSQRVIVAIYLILPVWMAAIFVPMVILVALEASSSPEGDPNALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLCGAMLFDSDAGLATGAMISGLACLLCSYLTRLQRKNEQVLKGVCEQDLITAWSNPTLDMHSAAAAVQRSFRMHLAA 325
            MSA+ LQA+FYGKSQF +    +M V +ALFM+P  +VFP LLR AN+PP S T+ +          +E   R A++         D++    EQ+       +++ +G    ++  Q+     + R  + ++ ++  T +E+ G  S            +TA Y D++  Q+ ++ +Y+ LP+ + A+ V  V+ V+ EA +   GD  A++HN+  SL +  S+LC+ SA+ V +     M KA AFQ +VAPG+ LCG +L  S   +A GA++  +  L+ +YL  +QRK E++L  + E DL+ AWSNPT +MH AA  +Q  FR    A
Sbjct: 1115 MSAIVLQALFYGKSQFGV----EMAVVSALFMLPAGVVFPALLRVANTPPASQTLQRP------VSLEEQPERTAEYRT-------DRRQV--EQEKTDDGFLATLQQGDATRRVGFQE-----QHRPPRKASPIRMFTAIEAQGTASPFLKPKPNAAVVETAAYLDVVEMQKALLLVYVPLPI-LLAMLVSEVLSVSREAEAD-GGDEYAVLHNMVTSLSLASSVLCMVSAFSVMSRSARTMRKATAFQGVVAPGMALCGVLLLGSSVFIAAGAVLGAVITLVGAYLVGIQRKYEEILSDLIEGDLVAAWSNPTREMHKAAETIQCCFRCKTVA 1423          
BLAST of mRNA_Ecto-sp13_S_contig5528.15802.1 vs. uniprot
Match: A0A835ZE00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE00_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 8.560e-19
Identity = 47/104 (45.19%), Postives = 66/104 (63.46%), Query Frame = 0
Query:  320 RMHLAATRMARAVEFSTWLNNCKPQRSFMYILVNSIIYVTILCLTYTNLVFAARFDRSTCTDWLTTCVLAVMIEATLQQPVVLLMTGVLGDFVEEGADFLLEVL 423
            R   A T   RA EF+ WL  C P R+ + +L ++   + I CL Y NLV+   FD  T   WL TC  A+++E  +QQP+VL++T VLGDFVE+G++ LL+VL
Sbjct:  144 RTQRARTTAIRAAEFAAWLKGCAPHRAALLLLAHACTALAIACLLYVNLVYGVVFDERTGCGWLLTCFFAMLVEGIVQQPLVLMVTAVLGDFVEQGSNVLLDVL 247          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5528.15802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JGV2_9PHAE1.270e-27393.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVI0_9PHAE3.170e-8542.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0E0_ECTSI3.690e-6660.43GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JCS7_9PHAE2.720e-6033.04REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB7_ECTSI1.140e-4633.81GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJB6_ECTSI1.380e-4234.33GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZE00_9STRA8.560e-1945.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 261..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..255
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 280..346
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 44..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 371..425
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 226..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..225
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 190..200
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 256..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 347..370
NoneNo IPR availableTMHMMTMhelixcoord: 24..43
NoneNo IPR availableTMHMMTMhelixcoord: 201..223
NoneNo IPR availableTMHMMTMhelixcoord: 236..255
NoneNo IPR availableTMHMMTMhelixcoord: 349..371
NoneNo IPR availableTMHMMTMhelixcoord: 259..281
NoneNo IPR availableTMHMMTMhelixcoord: 164..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5528contigEcto-sp13_S_contig5528:417..4884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5528.15802.1mRNA_Ecto-sp13_S_contig5528.15802.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5528 2..4920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5528.15802.1 ID=prot_Ecto-sp13_S_contig5528.15802.1|Name=mRNA_Ecto-sp13_S_contig5528.15802.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=426bp
MSAVALQAVFYGKSQFSIRDKAQMTVTTALFMIPTALVFPVLLRKANSPP
ISGTVTKAGRARHDAPFKENSRRHAQHGVLGHHHPLDKKTPHDEQQPALS
MKRSSVVRGTFVTKITLQDPPTFARRRERKPSAFVQPPTVVESIGGVSAN
KTAVYRDIIMSQRVIVAIYLILPVWMAAIFVPMVILVALEASSSPEGDPN
ALVHNLTASLGIVCSLLCVYSAYGVGAHRVIAMTKAMAFQAIVAPGLVLC
GAMLFDSDAGLATGAMISGLACLLCSYLTRLQRKNEQVLKGVCEQDLITA
WSNPTLDMHSAAAAVQRSFRMHLAATRMARAVEFSTWLNNCKPQRSFMYI
LVNSIIYVTILCLTYTNLVFAARFDRSTCTDWLTTCVLAVMIEATLQQPV
VLLMTGVLGDFVEEGADFLLEVLDF*
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