prot_Ecto-sp13_S_contig5525.15797.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5525.15797.1
Unique Nameprot_Ecto-sp13_S_contig5525.15797.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length105
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5525.15797.1 vs. uniprot
Match: D7FNL3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNL3_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 4.600e-51
Identity = 86/87 (98.85%), Postives = 87/87 (100.00%), Query Frame = 0 
Query:    1 MDLLQEANLKRGYYIGPRSEDEMVEYWRQVHHLALPSSSFAFVKVRIGGMVLTYPSWCVIRGQREIPEATKAMRGRILDSFTDALDG 87
            MDLLQEANLKRGYY+GPRSEDEMVEYWRQVHHLALPSSSFAFVKVRIGGMVLTYPSWCVIRGQREIPEATKAMRGRILDSFTDALDG
Sbjct: 1085 MDLLQEANLKRGYYVGPRSEDEMVEYWRQVHHLALPSSSFAFVKVRIGGMVLTYPSWCVIRGQREIPEATKAMRGRILDSFTDALDG 1171
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BLAST of mRNA_Ecto-sp13_S_contig5525.15797.1 vs. uniprot
Match: A0A6H5L2K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K3_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.860e-28
Identity = 64/89 (71.91%), Postives = 68/89 (76.40%), Query Frame = 0 
Query:    1 MDLLQEANLKRGYYIGPRSEDEMVEYWRQVHHLALPSSSFAFVKVRIGGMVLTYPSWCVIRGQREIPEATKAMRGRILDSFTDALDGKN 89
            MDLLQEANLKRGYY+GPRSEDEM    R V  L  P + F F        VLTYPSWCVIRGQ+EIPEATKAMRGRILDSFTDALDG +
Sbjct: 1105 MDLLQEANLKRGYYVGPRSEDEMEFDSRDV--LVAPDA-FLFP-------VLTYPSWCVIRGQKEIPEATKAMRGRILDSFTDALDGNS 1183
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5525.15797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNL3_ECTSI4.600e-5198.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2K3_9PHAE3.860e-2871.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5525contigEcto-sp13_S_contig5525:377..1548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5525.15797.1mRNA_Ecto-sp13_S_contig5525.15797.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5525 370..1548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5525.15797.1 ID=prot_Ecto-sp13_S_contig5525.15797.1|Name=mRNA_Ecto-sp13_S_contig5525.15797.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
MDLLQEANLKRGYYIGPRSEDEMVEYWRQVHHLALPSSSFAFVKVRIGGM
VLTYPSWCVIRGQREIPEATKAMRGRILDSFTDALDGKNPYRGRNNVHCC
VSMA*
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