prot_Ecto-sp13_S_contig5523.15795.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5523.15795.1
Unique Nameprot_Ecto-sp13_S_contig5523.15795.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length178
Homology
BLAST of mRNA_Ecto-sp13_S_contig5523.15795.1 vs. uniprot
Match: D8LHE3_ECTSI (HIT-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE3_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 9.610e-91
Identity = 147/176 (83.52%), Postives = 154/176 (87.50%), Query Frame = 0
Query:    1 KHLEPRPGNAPLRHRLKLFTKPWGEAAAXXXXXXXKTSGEASRVGTTMAVTGRQQKQQLRLFLQRVPCAAKRPLYWELDGGEPLGIALKGKTVIEHPTVYVTLDGKEATERFPTLVTDLESSDDITEDPSRVIGELERAMAPPVPAAVCLAVEEGLAPTDGLAPMDATSSEGEDGD 176
            KHLEPRPGNAPLRHRLKLFTKPWGEAAA       KTSG AS+    M VTGRQQKQQLRLFLQRVPCAAKRPLY ELDGGEPLG ALKGKTVIEHPTVYVTL+GKE TERFPTLV DLE +DDI EDPSRVIGELERAMAPPVPAA CL+V+EGL P DGLAPMDATSSEG++GD
Sbjct:  228 KHLEPRPGNAPLRHRLKLFTKPWGEAAAAATAATAKTSGVASK----MVVTGRQQKQQLRLFLQRVPCAAKRPLYLELDGGEPLGTALKGKTVIEHPTVYVTLNGKETTERFPTLVADLEPNDDIAEDPSRVIGELERAMAPPVPAAACLSVKEGLPPMDGLAPMDATSSEGDEGD 399          
BLAST of mRNA_Ecto-sp13_S_contig5523.15795.1 vs. uniprot
Match: A0A6H5KFC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC8_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 6.900e-64
Identity = 108/137 (78.83%), Postives = 115/137 (83.94%), Query Frame = 0
Query:   40 EASRVGTTMAVTGRQQKQQLRLFLQRVPCAAKRPLYWELDGGEPLGIALKGKTVIEHPTVYVTLDGKEATERFPTLVTDLESSDDITEDPSRVIGELERAMAPPVPAAVCLAVEEGLAPTDGLAPMDATSSEGEDGD 176
            E  RV + MA TGRQQ+QQLRLFLQRVPC AKRPLYWELDGGE LG+ LKGKTVIEHPTVYVTLDGKE TERFPTLV DLES+DDI E+PS+VIGELERAMA PVPA   L V+EGLAP      MDATSSEGEDGD
Sbjct:   24 ERRRVASKMAATGRQQRQQLRLFLQRVPCPAKRPLYWELDGGESLGVVLKGKTVIEHPTVYVTLDGKETTERFPTLVADLESNDDIAENPSQVIGELERAMAAPVPATASLTVKEGLAP------MDATSSEGEDGD 154          
BLAST of mRNA_Ecto-sp13_S_contig5523.15795.1 vs. uniprot
Match: A0A6S9K1D3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K1D3_HETAK)

HSP 1 Score: 53.1 bits (126), Expect = 2.240e-5
Identity = 36/101 (35.64%), Postives = 44/101 (43.56%), Query Frame = 0
Query:    2 HLEPRPGNAPLRHRL-KLFTKPWGEAAAXXXXXXXKTSGEASRVGTTMAVTGRQQKQQLRLFLQRVPCAAKRPLYWELDGGEPLGIALKGKTVIEHPTVYV 101
            HL+PRPGNAPLRHRL     K W E                   GT            L  +L+R+P  A    Y  LD    L   L+G TV+E PT+Y+
Sbjct:   12 HLDPRPGNAPLRHRLGPALAKAWAE-------------------GT------------LGFYLERLPGRANARRYRALDPARTLSEGLRGATVVEFPTIYL 81          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5523.15795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHE3_ECTSI9.610e-9183.52HIT-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KFC8_9PHAE6.900e-6478.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6S9K1D3_HETAK2.240e-535.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5523contigEcto-sp13_S_contig5523:4923..8510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5523.15795.1mRNA_Ecto-sp13_S_contig5523.15795.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5523 4923..8510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5523.15795.1 ID=prot_Ecto-sp13_S_contig5523.15795.1|Name=mRNA_Ecto-sp13_S_contig5523.15795.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=178bp
KHLEPRPGNAPLRHRLKLFTKPWGEAAAAAAAAAAKTSGEASRVGTTMAV
TGRQQKQQLRLFLQRVPCAAKRPLYWELDGGEPLGIALKGKTVIEHPTVY
VTLDGKEATERFPTLVTDLESSDDITEDPSRVIGELERAMAPPVPAAVCL
AVEEGLAPTDGLAPMDATSSEGEDGDGS
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