prot_Ecto-sp13_S_contig55206.15791.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig55206.15791.1
Unique Nameprot_Ecto-sp13_S_contig55206.15791.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length106
Homology
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BLAST of mRNA_Ecto-sp13_S_contig55206.15791.1 vs. uniprot
Match: A0A6H5KQT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQT4_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 5.250e-55
Identity = 98/106 (92.45%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:    1 GSDRSTTATADEILTSEGLELRSKGARKVFKQTQRLLEALRTPSESCQYDPDTGARRNCGGGNIGGHSSVVVHYHQSHSGSGLATVRDRFHRGGGGDPGGDAKVTD 106
            G D ST ATADEILTSEGLELRSKGARKVFKQTQRLLEALRTPS SCQYDP+TGARRNCGGGNIGGHSSVVVHYHQSHSGSG ATVRDR HRGGGGDP GDAKVTD
Sbjct:  380 GRDSSTIATADEILTSEGLELRSKGARKVFKQTQRLLEALRTPSASCQYDPETGARRNCGGGNIGGHSSVVVHYHQSHSGSGPATVRDRLHRGGGGDPDGDAKVTD 485
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BLAST of mRNA_Ecto-sp13_S_contig55206.15791.1 vs. uniprot
Match: D8LB35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB35_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 2.180e-53
Identity = 98/106 (92.45%), Postives = 99/106 (93.40%), Query Frame = 0 
Query:    1 GSDRSTTATADEILTSEGLELRSKGARKVFKQTQRLLEALRTPSESCQYDPDTGARRNCGGGNIGGHSSVVVHYHQSHSGSGLATVRDRFHRGGGGDPGGDAKVTD 106
            GSD S  ATADEILTSEGL LRSKGARKVFKQTQRLLEALRTPSESCQYDP+TGARRNCGGGNIGGHSSVVVHYHQSHSGSG ATV DR HRGGGGDPGGDAKVTD
Sbjct:  559 GSDISKIATADEILTSEGLGLRSKGARKVFKQTQRLLEALRTPSESCQYDPETGARRNCGGGNIGGHSSVVVHYHQSHSGSGPATVGDRLHRGGGGDPGGDAKVTD 664
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55206.15791.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQT4_9PHAE5.250e-5592.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB35_ECTSI2.180e-5392.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig55206contigEcto-sp13_S_contig55206:543..860 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig55206.15791.1mRNA_Ecto-sp13_S_contig55206.15791.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig55206 543..862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig55206.15791.1 ID=prot_Ecto-sp13_S_contig55206.15791.1|Name=mRNA_Ecto-sp13_S_contig55206.15791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
GSDRSTTATADEILTSEGLELRSKGARKVFKQTQRLLEALRTPSESCQYD
PDTGARRNCGGGNIGGHSSVVVHYHQSHSGSGLATVRDRFHRGGGGDPGG
DAKVTD
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