prot_Ecto-sp13_S_contig552.15787.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig552.15787.1
Unique Nameprot_Ecto-sp13_S_contig552.15787.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1003
Homology
BLAST of mRNA_Ecto-sp13_S_contig552.15787.1 vs. uniprot
Match: D7FP39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP39_ECTSI)

HSP 1 Score: 1580 bits (4091), Expect = 0.000e+0
Identity = 840/1008 (83.33%), Postives = 869/1008 (86.21%), Query Frame = 0
Query:    1 MNVSAQVATAAAASDLSQQPRQAHRPVHSPQQGSHGTSGGIGGHDLSLPWLADRFYLNVTPAVRESEQNGQGKDWKISQDTNVKYESNRSGSKYGGGGDSVGRGYANGPFFSLERLVDVVSGNGGPGIKAAIFGTMSLQIGRLAEEIPSLFSRANLTVPVLVLHGEKSLRRLRNSSAEVIDTTRGEAGGG----KRGANDCRTSSDRGADYILFRESLGKNASSEQRERLKAAGREDRLDYWEMSMPAHVQVEKVHTGGLGVHHPKFGLLFLKDDSLVVYVGTGNLGVDTAIDATWVQRFDQSKKGEAAYATDLEDGGTSEWKGDFGVTLQAFLAGYSRLMPQDPKKKDETAASRRRLRNTPIEFILRELGVERLGDSFDFSTAAVDLVPTVPTPMGATLARVRPWERPXXXXXXXXXXXXXXXXXXXXXXXXSAPALAVASDATASDGCGGDVNRSVSLQPNSNESTCWERGRHGGDTPVESSLRYCWQDPCPASPSMSPLPLLPVSSHLENGAIRGGXXXXXXRLSAATGSRDGEDPDDDLVGQLGADSADMSSRADEFDSPDGDPARGGPDTKGGDAVECGRAGWTDLRYSGGQLRMKYLLSKRRSQVEEAGPEDLLILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGAWKESRLDSVRIVWPSMQYMDACRKDMSKSTLLRDRQACTTMEVDHKYVMGEDGKTSDWDNNGFVFMSPDQFDGMGLDVHCCLRTFQLHPAIALALPLRPAHVKSVMRLRKAPFSLRPQLPSPQKQAIFAPNKSTNTCDRGGIGNSTMSHSSAEGAVAATXXXXXXXXSAAAGRTADVRGDTGCDGARPVVCANVQHFSWFLLTSACLSKGAQGEVVAHGDRPGTGTATSGAIFKNVELGVLFHSSSERAYHTASLPDCACPACGCSPGSSVPPHRTRTDTREFPPXXXXT--VSPRSIPLPVPFCLHSEAYTDPLTESPNCRFAPYMHTLKSDRPWSVEVQSLLNSNVREAQFA 1002
            MNVSAQ ATAAAASD+SQQPRQAHRP  SP+QG HGTSGGIGGHDLSLPWLADRFYLNV PAVRESE+NGQG+DWKISQDTNVK ESNRSGSK+ GGGDSVGRGYANGPFFSLERLVDVVSG GGPGIKAAIFGTMSLQIGRLAEEIPSLFSR+NLTVPVLVLHGEKSLRRLR+SSAEVI+TTRGEA       K GA+D RT+SD GADYILFRESLGKNASSEQRERLKAAGREDRLDYWEMSMPAHVQVEKVHTGGLGVHHPKFGLLFLKDDSLVVYVGTGNLGVDTAIDATWVQRF QS KGEAA   DL++GGTSEWKGDFGVTLQAFLAGYSRLM QDP KK  TA SRRRLRNTP+EF+LRELG+ERLGDSFDF TAAVDLVPTVPTPMGATL                                                        SVSLQPNSNESTCW+ GR GG+TPVESS R CWQDPC ASPSMSPLPLLPVS+H ENGA R G      RLSAATGS DGEDPDDDL GQ  ADSA  SSRAD+FD+PDG PARG PDT+GGDA+ECG AG TDLRY GGQLRMKYLLSKRR QVEEAGPEDLLILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGAWKESRLDSVRIVWPSMQYM ACRK+MSKSTLLRDRQA T MEVDHKYVMGEDGKT DWDNNGFVFMSPDQFDGMGLD+HCCL+TFQLHPA ALALPLRPAHVKSVMRLRKAPFSLRPQ PSPQKQAIF PNK+TNTCDRGGIGNSTMSHSSAEGAVA  XXXXXXXX    GRTADVRGDTGCDGARPVVC NVQHFSWFLLTSACLSKGAQGEVVAHGDR GTGTA  GAIFKNVELGVLFHSS ERAY+TA LPDCACP+CGCSPGS  PPH TRTDTRE PPXXXX   VSPRSIPLPVPFCLHSEAYTDPLTESPN RFAPYMHTLKS+RPWSVEVQ LLNSNVREAQFA
Sbjct:    1 MNVSAQAATAAAASDVSQQPRQAHRPQQSPKQGGHGTSGGIGGHDLSLPWLADRFYLNVIPAVRESERNGQGEDWKISQDTNVKSESNRSGSKHDGGGDSVGRGYANGPFFSLERLVDVVSGKGGPGIKAAIFGTMSLQIGRLAEEIPSLFSRSNLTVPVLVLHGEKSLRRLRDSSAEVINTTRGEAAXXXXXXKGGASDYRTNSDHGADYILFRESLGKNASSEQRERLKAAGREDRLDYWEMSMPAHVQVEKVHTGGLGVHHPKFGLLFLKDDSLVVYVGTGNLGVDTAIDATWVQRFGQSNKGEAACTRDLDNGGTSEWKGDFGVTLQAFLAGYSRLMRQDPNKKVGTATSRRRLRNTPMEFMLRELGIERLGDSFDFRTAAVDLVPTVPTPMGATL--------------------------------------------------------SVSLQPNSNESTCWDGGRGGGNTPVESSSRSCWQDPCLASPSMSPLPLLPVSTHQENGATRRGGGG---RLSAATGSGDGEDPDDDLDGQRAADSAATSSRADDFDAPDGGPARGAPDTEGGDAIECGGAGGTDLRYYGGQLRMKYLLSKRRGQVEEAGPEDLLILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGAWKESRLDSVRIVWPSMQYMGACRKEMSKSTLLRDRQASTIMEVDHKYVMGEDGKTPDWDNNGFVFMSPDQFDGMGLDLHCCLQTFQLHPATALALPLRPAHVKSVMRLRKAPFSLRPQPPSPQKQAIFTPNKNTNTCDRGGIGNSTMSHSSAEGAVADAXXXXXXXXXXXXGRTADVRGDTGCDGARPVVCTNVQHFSWFLLTSACLSKGAQGEVVAHGDRTGTGTAAPGAIFKNVELGVLFHSSPERAYYTAPLPDCACPSCGCSPGSGGPPHCTRTDTRELPPXXXXXSMVSPRSIPLPVPFCLHSEAYTDPLTESPNVRFAPYMHTLKSERPWSVEVQRLLNSNVREAQFA 949          
BLAST of mRNA_Ecto-sp13_S_contig552.15787.1 vs. uniprot
Match: A0A6H5KRI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI8_9PHAE)

HSP 1 Score: 1098 bits (2839), Expect = 0.000e+0
Identity = 617/694 (88.90%), Postives = 625/694 (90.06%), Query Frame = 0
Query:  323 GVTLQAFLAGYSRLMPQDPKKKDETAASRRRLRNTPIEFILRELGVERLGDSFDFSTAAVDLVPTVPTPMGATLARVRPWERPXXXXXXXXXXXXXXXXXXXXXXXXSAPALAVASDATASDGCGGDVNRSVSLQPNSNESTCWERGRHGGDTPVESSLRYCWQDPCPASPSMSPLPLLPVSSHLENGAIRGGXXXXXX--RLSAATGSRDGEDPDDDLVGQLGADSADMSSRADEFDSPDGDPARGGPDTKGGDAVECGRAGWTDLRYSGGQLRMKYLLSKRRSQVEEAGPEDLLILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGAWKESRLDSVRIVWPSMQYMDACRKDMSKSTLLRDRQACTTMEVDHKYVMGEDGKTSDWDNNGFVFMSPDQFDGMGLDVHCCLRTFQLHPAIALALPLRPAHVKSVMRLRKAPFSLRPQLPSPQKQAIFAPNKSTNTCDRGGIGNSTMSHSSAEGAVAATXXXXXXXXSAAAGRTADVRGDTGCDGARPVVCANVQHFSWFLLTSACLSK------GAQGEVVAHGDRPGTGTATSGAIFKNVELGVLFHSSSERAYHTASLPDCACPACGCSPGSSVPPHRTRTDTREFPPXXXXT------VSPRSIPLPVPFCLHSEAYTDPLTESPNCRFAPYMHTLKSDRPWSVEVQSLLNSNVREAQFA 1002
            G TLQAFLA YSRLM QDPK KDETA SRR+LRNTPIEF+LRELGVERLGDSFDFSTAAVDLVPTVPTPMGATLARVRPWERP XXXXXXXXXXXXXXXXXXXXXX SAPALAVA+DA A  GCGGDVNRSVSLQPNSNES CWERGR GG TPVESS RYCWQDPCPASPSMSPLPLLPV       A  G XXXXXX  RL AATGSRDG D DDDL GQ GADSADMSSRAD+FDSPDGDPARGGPDTKGGDAVEC RAG TDLR  GGQLRMKYLLSKRRSQVEEAGPED+LILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGAWKESRLDSVRIVWPSMQYMDACRK+MSKSTLLRDRQ  TTMEVDHKYVMGEDGKT DWDNNGFVFMSPDQFDGMGLD+HCCLRTFQLHPA ALALPLRPAHVKS MRLRKAPF LRPQLPSPQKQAIFAPNK+TNTCDRGGIGNS MSHSSAEGAVA  XXXXXXX  AAAGRTADVRGDTGCDGARPVVCANVQHFSWFLLTSACLSK      GAQGEVVAHGDR GTGTA SGAIFKNVELGVLFHSS ERAYHTA LPDCACPACGCSPGS VPPHR RTDT E PPXXXX       VSPRSIPLPVPF L SEAYTDPLTESPNCRFAPYMHTLKSDRPWSVEVQSLLNSNVREAQFA
Sbjct:    6 GCTLQAFLAEYSRLMRQDPKTKDETATSRRKLRNTPIEFMLRELGVERLGDSFDFSTAAVDLVPTVPTPMGATLARVRPWERPPXXXXXXXXXXXXXXXXXXXXXX-SAPALAVAADANAIGGCGGDVNRSVSLQPNSNESICWERGRGGGSTPVESSSRYCWQDPCPASPSMSPLPLLPVR---RRNAPXGXXXXXXXXXRLCAATGSRDGNDWDDDLEGQRGADSADMSSRADDFDSPDGDPARGGPDTKGGDAVECDRAGGTDLRCYGGQLRMKYLLSKRRSQVEEAGPEDVLILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGAWKESRLDSVRIVWPSMQYMDACRKEMSKSTLLRDRQVSTTMEVDHKYVMGEDGKTPDWDNNGFVFMSPDQFDGMGLDLHCCLRTFQLHPATALALPLRPAHVKSAMRLRKAPFPLRPQLPSPQKQAIFAPNKNTNTCDRGGIGNSAMSHSSAEGAVAXXXXXXXXXY-AAAGRTADVRGDTGCDGARPVVCANVQHFSWFLLTSACLSKAPSRAAGAQGEVVAHGDRTGTGTAASGAIFKNVELGVLFHSSPERAYHTAPLPDCACPACGCSPGSGVPPHRIRTDTLELPPXXXXXXXXXXMVSPRSIPLPVPFSLDSEAYTDPLTESPNCRFAPYMHTLKSDRPWSVEVQSLLNSNVREAQFA 694          
BLAST of mRNA_Ecto-sp13_S_contig552.15787.1 vs. uniprot
Match: B8CAD5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAD5_THAPS)

HSP 1 Score: 70.5 bits (171), Expect = 1.490e-8
Identity = 58/147 (39.46%), Postives = 72/147 (48.98%), Query Frame = 0
Query:  257 GVHHPKFGLLFLKDDSLVVYVGTGNLGVDTAIDATWVQRFDQSKKGEAAYATDLEDGGTSEWKGDFGVTLQAFLAGYSRLMPQDPKKKDETAASRRRLRNTPIEFILR-----ELGVERLGDSFDFSTAAVDLVPTVPTPMGATLAR 398
            GVHHPKF LLF K  SLVV + T NL   TA+DA+WVQRF+Q +  +    T ++ G  S    DFGV LQ  LA            K   AA    +   P  F+ R      LG+  L + + F  A V LV TVP    A L +
Sbjct:  618 GVHHPKFFLLFEKRGSLVVIISTSNLTSPTALDASWVQRFEQKELLQHRN-TAIDLGMPS----DFGVILQDLLA------------KQTNAAKVNSM--VPDIFLRRYVDGLSLGLSALSNRYRFDAAQVHLVSTVPGDYSACLPK 745          
BLAST of mRNA_Ecto-sp13_S_contig552.15787.1 vs. uniprot
Match: A0A1E7FI04_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FI04_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.030e-7
Identity = 47/158 (29.75%), Postives = 77/158 (48.73%), Query Frame = 0
Query:  256 LGVHHPKFGLLFLKDDSLVVYVGTGNLGVDTA--IDATWVQRFDQSKKGEAAYATDLEDGGTSEWKG---DFGVTLQAFLAGYSRLMPQDPKKKDETAASRRRLRNT---------------PI-EFILRELGVERLGD---SFDFSTAAVDLVPTVP 389
            +GVHHPKF LLF K  +LVV V T NL   +   ++ +W+QRF +++ G++   +   +    + +    DFG  LQ FL   S        ++ E A+++    N                P+ EF+ + LG+  L +   S++F +A   LVP +P
Sbjct:  238 MGVHHPKFMLLFEKSGNLVVIVTTSNLSKTSCSTVEGSWIQRFYRNRVGDSGRGSRKRNDHNDKQQAQTNDFGPVLQDFLLQLSEAAAHPSGRRKEVASTKPPTNNNSNKDKNKNNPKNNILPLSEFLSKHLGLNSLNEFSSSYNFESARAHLVPVIP 395          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig552.15787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FP39_ECTSI0.000e+083.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRI8_9PHAE0.000e+088.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B8CAD5_THAPS1.490e-839.46Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A1E7FI04_9STRA3.030e-729.75Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010347Tyrosyl-DNA phosphodiesterase IPFAMPF06087Tyr-DNA_phosphocoord: 843..959
e-value: 1.4E-5
score: 24.2
IPR010347Tyrosyl-DNA phosphodiesterase IPANTHERPTHR12415TYROSYL-DNA PHOSPHODIESTERASE 1coord: 250..389
IPR010347Tyrosyl-DNA phosphodiesterase IPANTHERPTHR12415TYROSYL-DNA PHOSPHODIESTERASE 1coord: 845..989
NoneNo IPR availablePANTHERPTHR12415:SF0TYROSYL-DNA PHOSPHODIESTERASE 1coord: 250..389
coord: 845..989
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 843..986

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig552contigEcto-sp13_S_contig552:810..14034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig552.15787.1mRNA_Ecto-sp13_S_contig552.15787.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig552 763..14034 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig552.15787.1 ID=prot_Ecto-sp13_S_contig552.15787.1|Name=mRNA_Ecto-sp13_S_contig552.15787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1003bp
MNVSAQVATAAAASDLSQQPRQAHRPVHSPQQGSHGTSGGIGGHDLSLPW
LADRFYLNVTPAVRESEQNGQGKDWKISQDTNVKYESNRSGSKYGGGGDS
VGRGYANGPFFSLERLVDVVSGNGGPGIKAAIFGTMSLQIGRLAEEIPSL
FSRANLTVPVLVLHGEKSLRRLRNSSAEVIDTTRGEAGGGKRGANDCRTS
SDRGADYILFRESLGKNASSEQRERLKAAGREDRLDYWEMSMPAHVQVEK
VHTGGLGVHHPKFGLLFLKDDSLVVYVGTGNLGVDTAIDATWVQRFDQSK
KGEAAYATDLEDGGTSEWKGDFGVTLQAFLAGYSRLMPQDPKKKDETAAS
RRRLRNTPIEFILRELGVERLGDSFDFSTAAVDLVPTVPTPMGATLARVR
PWERPPPPQQQQQQQTRKKEVRRLSPPPPSAPALAVASDATASDGCGGDV
NRSVSLQPNSNESTCWERGRHGGDTPVESSLRYCWQDPCPASPSMSPLPL
LPVSSHLENGAIRGGGGGGGGRLSAATGSRDGEDPDDDLVGQLGADSADM
SSRADEFDSPDGDPARGGPDTKGGDAVECGRAGWTDLRYSGGQLRMKYLL
SKRRSQVEEAGPEDLLILQPTSIGAGIDAGFLEIFAKNLMPDSAGPLRGA
WKESRLDSVRIVWPSMQYMDACRKDMSKSTLLRDRQACTTMEVDHKYVMG
EDGKTSDWDNNGFVFMSPDQFDGMGLDVHCCLRTFQLHPAIALALPLRPA
HVKSVMRLRKAPFSLRPQLPSPQKQAIFAPNKSTNTCDRGGIGNSTMSHS
SAEGAVAATAAAAAAEGSAAAGRTADVRGDTGCDGARPVVCANVQHFSWF
LLTSACLSKGAQGEVVAHGDRPGTGTATSGAIFKNVELGVLFHSSSERAY
HTASLPDCACPACGCSPGSSVPPHRTRTDTREFPPPPPPTVSPRSIPLPV
PFCLHSEAYTDPLTESPNCRFAPYMHTLKSDRPWSVEVQSLLNSNVREAQ
FA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010347Tdp1