prot_Ecto-sp13_S_contig5519.15784.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5519.15784.1
Unique Nameprot_Ecto-sp13_S_contig5519.15784.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length201
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5519.15784.1 vs. uniprot
Match: D8LDC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDC3_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 1.070e-114
Identity = 185/200 (92.50%), Postives = 187/200 (93.50%), Query Frame = 0 
Query:    1 GRRLVIYEASGGRHELSILEAISLLPLCRELDIPSTVMLTGIEVAPGTMQQSLSTFPIIELHCFPSMGQWPPPIEAINPTIDTGKYVQVQALSVTKAAEISRSAGSVVASGHGGVRSRKYDGLTVDVSLPGVILRRGCSCSEEXXXXXXXXXXXXXXXXDATDADADGVVFLCRVVNDRNGRRFPVLSSTGGGDDDAYDV 200
            GRRLVIYEASGGRHELSI EAISLLPLCREL IPSTV LTGIEVAPGTMQQSLSTFPIIELHC PSMGQWPPPIEAINPTIDTGKYVQVQALSVTKAAEISRSAGSVVASGHGGVRSRKYDGLTVDVSLPGVILRRGCSC+EE     XXXXXXXXXX DA DADADGVVFLCRVV+DRNGRRFPVLSSTGGGDDDA  V
Sbjct:   62 GRRLVIYEASGGRHELSIREAISLLPLCRELHIPSTVTLTGIEVAPGTMQQSLSTFPIIELHCLPSMGQWPPPIEAINPTIDTGKYVQVQALSVTKAAEISRSAGSVVASGHGGVRSRKYDGLTVDVSLPGVILRRGCSCNEEEAQAWXXXXXXXXXXMDAADADADGVVFLCRVVDDRNGRRFPVLSSTGGGDDDACGV 261
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BLAST of mRNA_Ecto-sp13_S_contig5519.15784.1 vs. uniprot
Match: A0A6H5JHX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHX2_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 1.380e-99
Identity = 173/257 (67.32%), Postives = 175/257 (68.09%), Query Frame = 0 
Query:    1 GRRLVIYEASGGRHELSILEAISLLPLCRELDIPSTVMLTGIEVAPGTMQQSLSTFPIIELHCFPSMGQWPPPIEAINPTIDTGKYVQVQALSVTKAAEISRSAGSVVASGHGGVRSRKYDG---------------------------------------------------------LTVDVSLPGVILRRGCSCSEEXXXXXXXXXXXXXXXXDATDADADGVVFLCRVVNDRNGRRFPVLSSTGGGDDDAYDV 200
            GRRLVIYEASGGRHELSI EAISLLPLCRELDIPSTV LTGIEVAPGTMQ SLSTFPIIELHC PSMGQ PPPIEAI+PTIDTGKYVQVQALSVTKAAEISRSAGSVVASGHGGVRSRKYDG                                                         LTVDVSLPGV LRRGCSCSEE                DATDADADGVVFLCRVVNDRNGRRFPVLSST GGD+DA  V
Sbjct:  104 GRRLVIYEASGGRHELSIREAISLLPLCRELDIPSTVTLTGIEVAPGTMQPSLSTFPIIELHCLPSMGQRPPPIEAISPTIDTGKYVQVQALSVTKAAEISRSAGSVVASGHGGVRSRKYDGETKAGLFLGPRGRNLLPFEGCESLTKLFTRISAARAKLTRIHSLTAESQNVRCTHPGLTVDVSLPGVTLRRGCSCSEEEARAWARDCLLPSPTMDATDADADGVVFLCRVVNDRNGRRFPVLSSTRGGDEDACGV 360
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5519.15784.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDC3_ECTSI1.070e-11492.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHX2_9PHAE1.380e-9967.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5519contigEcto-sp13_S_contig5519:3987..8904 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5519.15784.1mRNA_Ecto-sp13_S_contig5519.15784.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5519 3987..8904 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5519.15784.1 ID=prot_Ecto-sp13_S_contig5519.15784.1|Name=mRNA_Ecto-sp13_S_contig5519.15784.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=201bp
GRRLVIYEASGGRHELSILEAISLLPLCRELDIPSTVMLTGIEVAPGTMQ
QSLSTFPIIELHCFPSMGQWPPPIEAINPTIDTGKYVQVQALSVTKAAEI
SRSAGSVVASGHGGVRSRKYDGLTVDVSLPGVILRRGCSCSEEEARAWAR
DRPLPAPAMDATDADADGVVFLCRVVNDRNGRRFPVLSSTGGGDDDAYDV
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