prot_Ecto-sp13_S_contig5516.15782.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5516.15782.1
Unique Nameprot_Ecto-sp13_S_contig5516.15782.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length816
Homology
BLAST of mRNA_Ecto-sp13_S_contig5516.15782.1 vs. uniprot
Match: D7G031_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G031_ECTSI)

HSP 1 Score: 1070 bits (2767), Expect = 0.000e+0
Identity = 628/697 (90.10%), Postives = 639/697 (91.68%), Query Frame = 0
Query:   82 CGATYTHVESRPGNGGSGTSGMLHHLFKKHPLIHAEIIRANSSSKMRKAEGAVVKESTASSXXXXXXXXXXXXSKEPPQRHPPSSLGSALAQLRACSLAGGXXXXXXXXXSALPSPPMSAEDCLPHDRRFVLMCALQTLDPGSLCSNLGYRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGAGAGGTANAILQDLCEGVRREVASALRAHSESCRRFGWSGPFVGLQVDSTGVPGGEGXXXXXX-----EEVCTASVSFVSEDFGGLVRLAIGARCFRGRHTSHAKEAWIRELTADLFTSICHKSEPKDMYLAATVGGCSGDGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGRGAAGGGSEDECANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXLETVRVEVEELAAALARARGSNTRRVVDSHALFERLLQLAGPLNAHFRQAPTNRSLQPSEWQAIREAASILEPALEVLAKVHXXXXXXXXXXXXXXEGRREAEGVGTSAAAAACNGGDRGAAGAAARDKKKPRGVFLAESIELHANLHCSFIYPLQDIRRDALATAAMGEEVAPAPAMVSAGAGAAPFFSKRVAELTPEAQALLEAVAQGMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSALKLRALKAVSSQLRKFRDPASEVG 773
            CGATYTHVESRPGNGGSGTSGMLHHLFKKHPLIHAEIIRANSSSKMRKAEGAVVKES ASSXXXXXXXXXXX  +  PQ H PSSLGSALAQLRACSL G  XXXXXXXX ALPSPPMSAEDCLPHDRRFVLMCALQTLDPGSLCS+LG+RLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGA A GTANAILQDLC GVRREVASALRAHSESCRR GWSGPFVGLQVDSTG+PGGEGXXXXXX     EEVCTASVSFVSEDFGGLVRLAIGARCFRGR  SHAKE WIRELTADLFTSICHKSEPKD+YLAAT+GGCSG GGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLG  AAGG  ED+CANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXX            AALARARGS TR   DSHALFERLLQLAGPLNAHFRQAPT+RSLQPSEWQAIRE ASILEPALEVLAKVH     XXXXXXXX EGRR AEGVGTSAAAAACNGGDRGAAGAAARDKKKPRG+FLAESIELHANLHCSFIYPLQDIR DALATAA GE VA APAMV+AGAGAAPF SKRVAELTPEAQALLEAVA+GMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSALKLRALKAVSSQLRKFRDPASE G
Sbjct:    9 CGATYTHVESRPGNGGSGTSGMLHHLFKKHPLIHAEIIRANSSSKMRKAEGAVVKESAASSXXXXXXXXXXXKGR--PQPHHPSSLGSALAQLRACSLPG--XXXXXXXXXALPSPPMSAEDCLPHDRRFVLMCALQTLDPGSLCSDLGHRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGARAAGTANAILQDLCAGVRREVASALRAHSESCRRLGWSGPFVGLQVDSTGLPGGEGXXXXXXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRQMSHAKETWIRELTADLFTSICHKSEPKDIYLAATIGGCSGGGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGCAAAGGAGEDKCANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXXXXXXXXXXXXXAALARARGSTTR-WTDSHALFERLLQLAGPLNAHFRQAPTDRSLQPSEWQAIRETASILEPALEVLAKVHAREEGXXXXXXXXEEGRRAAEGVGTSAAAAACNGGDRGAAGAAARDKKKPRGIFLAESIELHANLHCSFIYPLQDIRGDALATAATGEGVAAAPAMVAAGAGAAPFCSKRVAELTPEAQALLEAVAEGMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSALKLRALKAVSSQLRKFRDPASEAG 700          
BLAST of mRNA_Ecto-sp13_S_contig5516.15782.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.520e-27
Identity = 171/690 (24.78%), Postives = 265/690 (38.41%), Query Frame = 0
Query:   83 GATYTHVES-RPGNG---GSGTSGMLHHLFKKHPLIHAEIIRANSSSKMRKA--EGAVVKESTASSXXXXXXXXXXXXSKEPPQRHPPSSLGSALAQLRACSLAGGXXXXXXXXXSALPSPPMSAEDCLPHDRRFVLMCALQTLDPGSLCSNLGYRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGAGAGGTANAILQDLCEGVRREVASALRAHSESCRRFGWSGPFVGLQVDSTGVPGGEGXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRHTSHAKEAWIRELTADLFTSICHKS-EPKDMYLAATVGGCSGDGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGRGAAGGGSEDECANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXLETVRVEVEELAAALARARGSNTRRVVDSHALFERLLQLAGPLNAHFRQAPTN-RSLQPSEWQAIREAASILEPALEVLAKVHXXXXXXXXXXXXXXEGRREAEGVGTSAAAAACNGGDRGAAGAAARDKKKPRGVFLAESIELHANLHCSFIYPLQDIRRDALATAAMGEEVAPAPAMVSAGAGAAPFFSKRVAELTPEAQALLEAVAQGMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSALKLRA---LKAVSSQ 761
            G T  H+    P  G   GSGT+G+  H+ K HP    +I     +   RK   + A+  +S+A S                     PS+  S+ + L    +                 P +  +     D RFV+ C +  L P  +  + G++LF+G L+P                     Y  ST   +         T +  L  L   V+  +   LR   E C   G+SG F+G Q+D T V G         EE  T +VS+V +    + R+A+  R F G HT+     WI ELT + F     +  EPKD++LA TV     D G +   A + +GVPV+ C+ +R+++AV  +LG   AG G      N  M D++++  ++V VF H                          E  R+E E+L A     R ++TR       + +RLL L  P+  +FR+ P N R L   EW    E  S+L    EV  ++                                            A+D    + +F+   +             ++ +R D+    A                 A      +V EL+  AQ +LE +   MEE  +G+A +  E +S L+DPR K    +   +G + L+ +A   LKAV +Q
Sbjct:  110 GTTCNHLMKWTPSEGKQRGSGTTGLTKHIEKFHPTTAQKIKEEEGTQAERKESIQAAIAGDSSAGSSTAL-----------------PSASASSSSSLVNYMV-----------------PKLDKKRREMADLRFVIWCCIN-LRPQQMRHDDGFKLFLGALSP--------------------DYVESTMSND---------TFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAG---------EEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGEDVEPKDVFLAFTV-----DQGGNVVNACKALGVPVVKCNCHRVNTAVLWALG--IAGNGRR----NKVMGDLMKKLAALVGVFSHSAVNNDKLK-----------------ELQRLE-EDLHAVYQLIRRNDTR-WTSQFKMMDRLLALKKPITEYFREQPHNSRKLTQPEWTITNEVCSLLSDVSEVTIRMQG------------------------------------------AKDTHISQAMFIIHEV-------------MEMLREDSHPIRAQN---------------ATEPEEMQVLELSSAAQGVLEVLLDVMEEKQVGKAVQQVERLSALMDPRRKSLDGAKLENGSATLRKKAEEDLKAVIAQ 626          
BLAST of mRNA_Ecto-sp13_S_contig5516.15782.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.260e-24
Identity = 108/377 (28.65%), Postives = 167/377 (44.30%), Query Frame = 0
Query:  208 DRRFVLMCALQTLDPGSLCSNLGYRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGAGAGGTANAILQDLCEGVRREVASALRAHSESCRRFGWSGPFVGLQVDSTGVPGGEGXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRHTSHAKEAWIRELTADLFTSICHKS-EPKDMYLAATVGGCSGDGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGRGAAGGGSEDECANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXLETVRVEVEELAAALARARGSNTRRVVDSHALFERLLQLAGPLNAHFRQAPTN-RSLQPSEWQAIREAASILEPALEVLAKV 582
            DRRFVL C +  L P  L  + G++LF+G L+P Y                      +T + +         T N  L +L   V   V   LR   E     G+SGPF+G Q+D T   G         EE  T +V+FV +    + R+A+ AR F G HT+   + WI +LT + F+    +S +P D++LA TV     D G +   A   +GV V+ C+ +RL++AV  +LG   AG G      N  M  ++++  +MV VF H                         L+ ++  +EE  + +      N  R      + +R+L L  P++ +F++ P N R L P+EW    E  S+L    EV  ++
Sbjct:   14 DRRFVLWCCID-LRPEQLRFDQGFKLFLGSLSPEY---------------------VTTTMAKS--------TFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAG---------EEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTV-----DQGKNIINACTALGVTVVECNCHRLNTAVVWALG--IAGKGR----LNPAMGTLMKKLAAMVGVFSH------------------SAVNNDELKELQ-RLEEGFSRIYELLRPNDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRM 321          
BLAST of mRNA_Ecto-sp13_S_contig5516.15782.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 2.200e-24
Identity = 108/377 (28.65%), Postives = 164/377 (43.50%), Query Frame = 0
Query:  208 DRRFVLMCALQTLDPGSLCSNLGYRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGAGAGGTANAILQDLCEGVRREVASALRAHSESCRRFGWSGPFVGLQVDSTGVPGGEGXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRHTSHAKEAWIRELTADLFTSICHKS-EPKDMYLAATVGGCSGDGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGRGAAGGGSEDECANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAXXXXXXXXXXXXXXLETVRVEVEELAAALARARGSNTRRVVDSHALFERLLQLAGPLNAHFRQAPTN-RSLQPSEWQAIREAASILEPALEVLAKV 582
            DRRFVL C +  L P  L  + G++LF+G L+P Y                      +T + +         T N  L +L   V   V   LR   E     G+SGPF+G Q+D T   G         EE  T +V+FV +    + R+A+ AR F G HT+   + WI +LT + F+    +S +P D++LA TV     D G +   A   +GV V+ C+ +RL++AV  +LG   AG G      N  M  ++++  +MV VF H                         L+ +      +   L R    N  R      + +R+L L  P++ +F++ P N R L P+EW    E  S+L    EV  ++
Sbjct:  209 DRRFVLWCCID-LRPEQLRFDQGFKLFLGSLSPEY---------------------VTTTMAKS--------TFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAG---------EEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGESVQPSDVFLAFTV-----DQGKNIINACTALGVTVVECNCHRLNTAVVWALG--IAGKGR----LNPAMGTLMKKLAAMVGVFSH---------------SAVNNDELKELQRLEEGFSRIYELLRR----NDTRWTSQFKMMDRVLALKKPISEYFKKYPQNERKLTPNEWTITNEVCSLLSDVSEVTIRM 516          
BLAST of mRNA_Ecto-sp13_S_contig5516.15782.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.160e-7
Identity = 53/173 (30.64%), Postives = 75/173 (43.35%), Query Frame = 0
Query:  208 DRRFVLMCALQTLDPGSLCSNLGYRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGAGAGGTANAILQDLCEGVRREVASALRAHSESCRRFGWSGPFVGLQVDSTGVPGGEGXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRHTSHAKEAWIRE 380
            DRRFVL C +  L P  L  + G++LF+G L+P Y                      +T + +         T N  L +L   V   V   LR   E     G+SGPF+G Q+D T   G         EE  T +V+FV +    + R+A+ AR F G HT+   + WI +
Sbjct: 1293 DRRFVLWCCID-LRPEQLRFDQGFKLFLGSLSPEY---------------------VTTTMAKS--------TFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAG---------EEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEK 1426          
BLAST of mRNA_Ecto-sp13_S_contig5516.15782.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 1.840e-5
Identity = 56/197 (28.43%), Postives = 78/197 (39.59%), Query Frame = 0
Query:  208 DRRFVLMCALQTLDPGSLCSNLGYRLFVGGLAPGYGAGRRLARRRSGLAPSGSSYAASTAVTEGANGAGAGGTANAILQDLCEGVRREVASALRAHSESCRRFGWSGPFVGLQVDSTGVPGGEGXXXXXXEEVCTASVSFVSEDFGGLVRLAIGARCFRGRHTSHAKEAWIRELTADLFTSICHKSEPKDMYLAATV 404
            D RFV+   +  L P  +  + G++LF+G L+P                     Y  ST   +         T +  L  L   V   V   LR   E C   G+SG F+G Q+D T V G         EE  T +VS+V +    + R+A+  R F G HT+     WI EL   LF      +   D    AT+
Sbjct:  323 DLRFVIWRCIN-LRPQQMRHDDGFKLFLGALSP--------------------DYVESTMSND---------TFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAG---------EEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEELRC-LFLHCVQCAVQDDDIFGATI 479          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5516.15782.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G031_ECTSI0.000e+090.10Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JRT6_9PHAE1.520e-2724.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTB8_9PHAE1.260e-2428.65Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JGG8_9PHAE2.200e-2428.65Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ec... [more]
A0A6H5KVP4_9PHAE1.160e-730.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFJ9_9PHAE1.840e-528.43Fanconi-associated nuclease n=1 Tax=Ectocarpus sp.... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5516contigEcto-sp13_S_contig5516:3750..8857 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5516.15782.1mRNA_Ecto-sp13_S_contig5516.15782.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5516 3238..8951 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5516.15782.1 ID=prot_Ecto-sp13_S_contig5516.15782.1|Name=mRNA_Ecto-sp13_S_contig5516.15782.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=816bp
MDSSNNNGSPAAAAPASSTSPGDPQQLFSPSGRKRKQRTSGVWKYFEQFP
PVAPKGRNVRCTVLVEVPGDPALGLPQRTVRCGATYTHVESRPGNGGSGT
SGMLHHLFKKHPLIHAEIIRANSSSKMRKAEGAVVKESTASSSGSGSGSG
SGGGSKEPPQRHPPSSLGSALAQLRACSLAGGGGGGGGSGGSALPSPPMS
AEDCLPHDRRFVLMCALQTLDPGSLCSNLGYRLFVGGLAPGYGAGRRLAR
RRSGLAPSGSSYAASTAVTEGANGAGAGGTANAILQDLCEGVRREVASAL
RAHSESCRRFGWSGPFVGLQVDSTGVPGGEGGGGGGGEEVCTASVSFVSE
DFGGLVRLAIGARCFRGRHTSHAKEAWIRELTADLFTSICHKSEPKDMYL
AATVGGCSGDGGSSFGRAFQDMGVPVLVCSSYRLHSAVSCSLGRGAAGGG
SEDECANAKMRDVVRRAVSMVEVFEHWRPEGGVFAAAAAAAAGSASGSAT
TLETVRVEVEELAAALARARGSNTRRVVDSHALFERLLQLAGPLNAHFRQ
APTNRSLQPSEWQAIREAASILEPALEVLAKVHAREEGELEGEMEGEEGR
REAEGVGTSAAAAACNGGDRGAAGAAARDKKKPRGVFLAESIELHANLHC
SFIYPLQDIRRDALATAAMGEEVAPAPAMVSAGAGAAPFFSKRVAELTPE
AQALLEAVAQGMEESGLGRAREDTEAVSMLLDPRFKQCCASTCVDGGSAL
KLRALKAVSSQLRKFRDPASEVGGGQGGAGDGGGGAAAARQELGAGAGGA
GAGGGGGQRLAGWTR*
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