prot_Ecto-sp13_S_contig5513.15778.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5513.15778.1
Unique Nameprot_Ecto-sp13_S_contig5513.15778.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length112
Homology
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BLAST of mRNA_Ecto-sp13_S_contig5513.15778.1 vs. uniprot
Match: D7G5Y5_ECTSI (DEK C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y5_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.090e-28
Identity = 55/58 (94.83%), Postives = 56/58 (96.55%), Query Frame = 0 
Query:   54 ASGPTTDELRAKVEELIANSEDVSSLTFKMMKGQLEEHFGIPLADRKPELIDILSEAM 111
            ASGPTTDELR KVEELIANS+DVSSLTFKMMK QLEEHFGIPLADRKPELIDILSEAM
Sbjct:   70 ASGPTTDELRVKVEELIANSQDVSSLTFKMMKSQLEEHFGIPLADRKPELIDILSEAM 127
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5513.15778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5Y5_ECTSI1.090e-2894.83DEK C-terminal domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..55
NoneNo IPR availableSUPERFAMILY109715DEK C-terminal domaincoord: 52..104
IPR014876DEK, C-terminalPFAMPF08766DEK_Ccoord: 57..102
e-value: 1.8E-8
score: 34.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5513contigEcto-sp13_S_contig5513:6615..8109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5513.15778.1mRNA_Ecto-sp13_S_contig5513.15778.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5513 6615..8109 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5513.15778.1 ID=prot_Ecto-sp13_S_contig5513.15778.1|Name=mRNA_Ecto-sp13_S_contig5513.15778.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=112bp
MLSKGKSGAGASASPPAKRAKTPPKATKKRKAAEVEEEEEEEDEEEEEEE
EEEASGPTTDELRAKVEELIANSEDVSSLTFKMMKGQLEEHFGIPLADRK
PELIDILSEAM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014876DEK_C