prot_Ecto-sp13_S_contig5511.15771.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5511.15771.1
Unique Nameprot_Ecto-sp13_S_contig5511.15771.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length126
Homology
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: A0A6H5KJL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL6_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 5.120e-53
Identity = 78/119 (65.55%), Postives = 92/119 (77.31%), Query Frame = 0
Query:    8 VEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHHGDYAPEGGWACDWRDNTDDNPSPSLL 126
            VE+DCRKLEEL VCDWLRSISRRVP NDVI VATKCD+ GGN R+ G RME+ C+ WL+ WVR+GMQPVR+E  VCLTSCF  R+D +   + G++  +GGWACDWRD  DD P P  L
Sbjct:  165 VEEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLAGGNAREIGSRMEKTCRTWLSGWVRNGMQPVRLEPHVCLTSCFPVRVDKQGDRNAGNHGSKGGWACDWRDEEDDQPPPGFL 283          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 3.390e-47
Identity = 79/123 (64.23%), Postives = 91/123 (73.98%), Query Frame = 0
Query:    4 VGDQVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHHGDYAPEGGWACDWRDNTDDNPSPSLL 126
             G QV++DCRKLEEL VCDWLRS+SRRVP NDVI VATKCD+VGGN  + GRR+E+A + WLASWV DGMQPVR+E  VCLTSC A  +        G  A E GWACDWRD+ DD P P L+
Sbjct:  330 TGGQVKEDCRKLEELRVCDWLRSVSRRVPNNDVILVATKCDLVGGNAEEFGRRIEQATRTWLASWVHDGMQPVRLEPGVCLTSCCASAVGENGEKSTGHNASERGWACDWRDDRDDMPPPGLV 452          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 3.420e-47
Identity = 84/125 (67.20%), Postives = 93/125 (74.40%), Query Frame = 0
Query:    4 VGDQVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHHG--DYAPEGGWACDWRDNTDDNPSPSLL 126
             G QV++DCRKLEEL VCDWLRSISRRVP NDVI VATKCD VGGN  + G+R+E A + WLASWVR GMQPVR+E  VCLTSC     +V E G     + A EGGW CDWRD  DDNPSPSLL
Sbjct:  430 TGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCT--TNVCEDGERSTRNQAMEGGWTCDWRDGKDDNPSPSLL 552          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 4.330e-47
Identity = 79/121 (65.29%), Postives = 90/121 (74.38%), Query Frame = 0
Query:    6 DQVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHHGDYAPEGGWACDWRDNTDDNPSPSLL 126
            DQV +DCRKLEEL VCDWLRSISRRVP NDVI VATKCD+ GGN    G RME AC++WL+SWVR+G+QPVR+E  V LTSCF   +        G +  +GGWACDWRD  D NPSPSLL
Sbjct:  288 DQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLL 408          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 1.190e-46
Identity = 77/125 (61.60%), Postives = 93/125 (74.40%), Query Frame = 0
Query:    2 QGVGDQVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHHGDYAPEGGWACDWRDNTDDNPSPSLL 126
            +  G+  ++DCRKLEEL VCDWLRSISRRVP NDVI VATKCD+VGGN  + G RME +C+ WL+ WVR+GMQPVR+E  VCLTSCF  R+        G++  +GGWACDWR+  DD PSPS L
Sbjct:  499 EDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHVWKGGWACDWRNVEDDQPSPSFL 623          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: A0A6H5L846_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L846_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 9.220e-46
Identity = 88/176 (50.00%), Postives = 101/176 (57.39%), Query Frame = 0
Query:    3 GVGDQVEKDCRKLEELCVCDWLRSISRRVPGN--------------------------------------------DVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDV-------REGGH-HGDYAPEGGWACDWRDNTDDNPSPSLL 126
            GVG QV+KDCRKLE+LCVCDWLRSISRRVP N                                            DVI VATKCD+ GGN  +TGRR+EEAC+ WLA WVRDGMQPVRVED VCLTSC              ++G    G++A +G WACDWRDN D+N SP+LL
Sbjct:  143 GVGGQVDKDCRKLEDLCVCDWLRSISRRVPDNEGGSYVIFGKVEHRTSNKRIVRSSTFWGRRQEEEHKKQPHQTHPDVILVATKCDLAGGNAWETGRRIEEACRTWLADWVRDGMQPVRVEDGVCLTSCCVXXXXXXXXXXXXKQGNDSRGNHASKGTWACDWRDNADENSSPNLL 318          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 5.730e-44
Identity = 79/122 (64.75%), Postives = 91/122 (74.59%), Query Frame = 0
Query:    6 DQVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREG-GHHGDYAPEGGWACDWRDNTDDNPSPSLL 126
            DQVE+DCRKL+ L VCDWLRSISRRVPGNDVI VATKCD+V GN  +TGRR+E AC+ WL++WVR+GM PVR+E  V LTSCF P  D   G  + G  A + GWACDWR    D  SPSLL
Sbjct:  219 DQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCF-PIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLL 339          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 5.790e-44
Identity = 77/125 (61.60%), Postives = 88/125 (70.40%), Query Frame = 0
Query:    7 QVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHHGDYAPE-----GGWACDWRDNTDDNPSPSLL 126
            +VE+DCRKLEEL VCDWLRSISRRVP NDVI V TKCD+ GGN  + G R+E AC+ WL+SWVR GMQPV++E  V  TSCF       EGG HG+   E     G WACDW D  DD+P PSLL
Sbjct:  239 EVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNAAEIGERVEHACRTWLSSWVRHGMQPVQLEPGVSFTSCFPA-----EGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLL 358          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: A0A6H5KSA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA3_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 1.260e-43
Identity = 74/109 (67.89%), Postives = 83/109 (76.15%), Query Frame = 0
Query:    6 DQVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHHGDYAPEGGWACDWR 114
            DQVE+DCRKLE L VCDWLRSISRRVPGNDVI VATKCD+V GN  +TGRRME ACQ WL+SWVRDGM  VR+E  V LTSCF   +        G++A + GWACDWR
Sbjct:  161 DQVEEDCRKLEGLRVCDWLRSISRRVPGNDVILVATKCDLVSGNVEETGRRMEHACQTWLSSWVRDGMDAVRLERHVSLTSCFPIVVGEHGESSPGNHASKQGWACDWR 269          
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 2.020e-43
Identity = 76/128 (59.38%), Postives = 91/128 (71.09%), Query Frame = 0
Query:    4 VGDQVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNPRDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHHGD-----YAPEGGWACDWRDNTDDNPSPSLL 126
             G Q+ +DCRKLEEL VC+WLRSI+RRVP ND I VATKCD+VGGN  + GRRME+AC+ WLASWVR+GMQPVR+E  V LTSC   R      G HG+     +  EGGW CDWR +  D+ +P LL
Sbjct:  358 TGGQIMEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGNAAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTRF-----GEHGERGTANHTVEGGWVCDWRGHIGDDSAPGLL 480          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5511.15771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5KJL6_9PHAE5.120e-5365.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC9_ECTSI3.390e-4764.23LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FUD0_ECTSI3.420e-4767.20LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5KSZ8_9PHAE4.330e-4765.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF46_ECTSI1.190e-4661.60LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5L846_9PHAE9.220e-4650.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZA1_ECTSI5.730e-4464.75LRR-GTPase of the ROCO family, incomplete sequence... [more]
D7G431_ECTSI5.790e-4461.60LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5KSA3_9PHAE1.260e-4367.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC3_ECTSI2.020e-4359.38LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 7..96
e-value: 2.7E-5
score: 26.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5511contigEcto-sp13_S_contig5511:7796..8173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5511.15771.1mRNA_Ecto-sp13_S_contig5511.15771.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5511 7796..8173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5511.15771.1 ID=prot_Ecto-sp13_S_contig5511.15771.1|Name=mRNA_Ecto-sp13_S_contig5511.15771.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=126bp
DQGVGDQVEKDCRKLEELCVCDWLRSISRRVPGNDVIFVATKCDMVGGNP
RDTGRRMEEACQKWLASWVRDGMQPVRVEDSVCLTSCFAPRMDVREGGHH
GDYAPEGGWACDWRDNTDDNPSPSLL
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