prot_Ecto-sp13_S_contig55100.15769.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig55100.15769.1
Unique Nameprot_Ecto-sp13_S_contig55100.15769.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length35
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig55100.15769.1 vs. uniprot
Match: D8LH68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH68_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.850e-8
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0 
Query:   10 ASYIPLPRLWDTSLEKIRRRCHIDAT 35
            AS+IPLPRLWDTSLEKIRRRCHIDAT
Sbjct:  336 ASFIPLPRLWDTSLEKIRRRCHIDAT 361
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig55100.15769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LH68_ECTSI1.850e-896.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig55100contigEcto-sp13_S_contig55100:332..436 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig55100.15769.1mRNA_Ecto-sp13_S_contig55100.15769.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig55100 200..436 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig55100.15769.1 ID=prot_Ecto-sp13_S_contig55100.15769.1|Name=mRNA_Ecto-sp13_S_contig55100.15769.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=35bp
MFARCCCEQASYIPLPRLWDTSLEKIRRRCHIDAT
back to top