prot_Ecto-sp13_S_contig5508.15765.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig5508.15765.1
Unique Nameprot_Ecto-sp13_S_contig5508.15765.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: D8LE14_ECTSI (TPR Domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE14_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 9.380e-123
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0
Query:    1 GFHDDGDRSPPGTNSNGHRRFGRVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKYEMPSSSQGLLGSKDSAGGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            GFHDDGDRSPPGTNS+GHRRFGRVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKYEMPSSS GLLGSKDSAGGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKA+ENYKKFLAVCKTLKDPFIEGVCHNCMG
Sbjct:   78 GFHDDGDRSPPGTNSSGHRRFGRVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKYEMPSSSHGLLGSKDSAGGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKALENYKKFLAVCKTLKDPFIEGVCHNCMG 260          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: A0A6H5LCZ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCZ2_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 6.990e-96
Identity = 157/200 (78.50%), Postives = 161/200 (80.50%), Query Frame = 0
Query:    1 GFHDDGDRSPPGTNSNGHRRFGRVDTPLRVEPPPSFNAPARPVDQTQDQQIKA-----------------SAFSPAAFTMRKYEMPSSSQGLLGSKDSAGGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            GFHDDGDRSP GTNSNGHRRFGRVD+PLRVEPPPSFNAPARPVDQTQDQQIKA                 SAFSP+AFTMRK                   SSTASLVGSLRQRQEP KRDLTENHASYRIAMSDY+MLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKA+ENYKKFLAVCKTLKD FIEGVCHNCMG
Sbjct:   77 GFHDDGDRSPLGTNSNGHRRFGRVDSPLRVEPPPSFNAPARPVDQTQDQQIKARPTHSLIDRCLCHAEGASAFSPSAFTMRK-------------------SSTASLVGSLRQRQEPKKRDLTENHASYRIAMSDYNMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAIENYKKFLAVCKTLKDLFIEGVCHNCMG 257          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: A0A836C9X6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 7.710e-34
Identity = 74/164 (45.12%), Postives = 102/164 (62.20%), Query Frame = 0
Query:   20 RFGRVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKYEMPSSSQGLLGSKDSAGGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            RF ++DTPLR+ PP   N P R  +QT++Q+I+ASAF+PA+F  R+  +  +          A GS T ++      R   ++R  +EN A    A+SDY +LA SSQR+GR +MEGLAY+  GV  D+MGQY KA+E YKK+L VC+   D   E + HNCMG
Sbjct:   11 RFPQLDTPLRLSPPSHMNTPERTDEQTEEQRIRASAFAPASFARRRAALALA----------AAGSDTQTMPDG---RAPVSRRTHSENQAPSVTAISDYTVLASSSQRAGRPQMEGLAYFCIGVLYDNMGQYGKALEAYKKYLGVCRRTDDKQGEALAHNCMG 161          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: A0A7S2C237_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C237_9STRA)

HSP 1 Score: 130 bits (328), Expect = 7.550e-33
Identity = 69/165 (41.82%), Postives = 107/165 (64.85%), Query Frame = 0
Query:   20 RFGRVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKYEMPSSSQG-LLGSKDSAGGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            +F ++D PLRV+PP S  AP R    ++D+QI+ SAFSP AF++R       S+  +LG+         +   G  + + + +    ++N A ++ A+SDY MLAFSSQR+G+ +MEG AY +  +T+D+M QY KA+E+Y KFL+VC+ + DP IEG+ +NC+G
Sbjct:   60 QFPQIDMPLRVDPPASLKAPERVEALSRDRQIRDSAFSPHAFSLRSSVTQRLSEPPVLGTGGGNASRGVSEARGKSKTKIDSSVAAHSQNQAPHKTAVSDYSMLAFSSQRAGKTQMEGQAYLAIAITLDNMQQYTKAIESYGKFLSVCEKMGDPVIEGLAYNCLG 224          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: A0A7S2UWM0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWM0_9STRA)

HSP 1 Score: 110 bits (274), Expect = 6.270e-25
Identity = 67/182 (36.81%), Postives = 100/182 (54.95%), Query Frame = 0
Query:   20 RFGRVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKY---------------EMPSSSQGLLGSKDSA---GGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            R+ ++DTPLRV+PP S  AP R    T++QQI+  AFSP AFT+R                 E  +  Q + G+ D      G ++    G   Q+     +   +  A+YR A+ D  MLA+SS+R+G+ E EG AYY+ GV +D++G + KA+E Y  FL VC+  ++   E + HNC+G
Sbjct:   77 RYPQIDTPLRVDPPSSMKAPHRVEPPTREQQIRDQAFSPQAFTLRVQVLTPLLSEDIQTRLREEKNKKQVVWGADDQRPQMNGMASGEDGGKGSQKD----KQWGQMDATYRTAIRDLQMLAYSSKRAGKTETEGHAYYALGVLLDNLGHFHKAIEAYNSFLGVCRASQEVVQEALAHNCIG 254          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: A0A7S2RJ11_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ11_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.290e-21
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 0
Query:   21 FGRVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKYEMPSSSQGLLGSKDSAGGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            F ++DTPLR++PP    AP R    ++D  ++  AFSPAAF  R  + PS+     G     GG      +G   Q Q           A YR A++DY MLAFSSQR+G+ +MEG +Y +  ++ D++ Q+ +A+ENY+K+L V +   +   E +  NC+G
Sbjct:   28 FPQIDTPLRIQPPEYMKAPERVQPDSKDTLLRRLAFSPAAFVGRHRKGPSND----GPSAKEGGH-----LGPAGQDQ-----------ADYRNAVADYSMLAFSSQRAGKLDMEGQSYLAIAISNDNVEQFQQAIENYEKYLLVARKTGETLGEALARNCIG 170          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: A0A8J8NP76_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NP76_HALGN)

HSP 1 Score: 75.5 bits (184), Expect = 1.070e-12
Identity = 52/162 (32.10%), Postives = 79/162 (48.77%), Query Frame = 0
Query:   23 RVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKYEMPSSSQGL-LGSKDSAGGSSTASLVGSLRQRQEPTKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            RV+ P R+E P  FN P R  D    ++++  A    A  ++      SS GL +   DS                          N  + +  + DY++LAF+ +R+G+   EG AYYS GV  D++G+Y  A+E YK+FL VCK + D   E + +NC+G
Sbjct:   74 RVNQPQRIELPIYFNTPKRKEDIISKKRLENQAQELTASVLK------SSSGLNMAYADSY-------------------------NRIAAQKRLKDYNILAFACKRAGKSRDEGRAYYSTGVLYDNLGKYKAAIEQYKRFLQVCKAIGDVHGEALSYNCIG 204          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: J9JA71_9SPIT (TPR Domain containing protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9JA71_9SPIT)

HSP 1 Score: 75.1 bits (183), Expect = 1.440e-12
Identity = 32/76 (42.11%), Postives = 52/76 (68.42%), Query Frame = 0
Query:  108 NHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            N  + +  + DY++LAF+ +R+G+   EG AYYS GV  D++G+Y +A++ YK+FL VCK + D   E + +NC+G
Sbjct:  130 NRIAAQKRLKDYNILAFACKRAGKSRDEGRAYYSTGVLFDNLGKYKQAIDQYKRFLQVCKAIGDAHGEALSYNCIG 205          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: A0A482SQ84_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQ84_9ARCH)

HSP 1 Score: 73.9 bits (180), Expect = 1.960e-12
Identity = 51/165 (30.91%), Postives = 82/165 (49.70%), Query Frame = 0
Query:   23 RVDTPLRVEPPPSFNAPARPVDQTQDQQIKASAFSPAAFTMRKYEMPSSSQGLLGSKDSAGGSSTASLVGSLRQRQEPT---KRDLTENH-ASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            +++T LRV  P   N P R    T+DQ I  S FSP A  + + +                       +  ++ +++PT   K  +  +H A  + A+ D+ +LAFSS+R+G+ ++E LAY S GV  D+  +Y  A+ENYK +L + + L D        NC+G
Sbjct:   15 KLETALRVAIP--INVPERNAKPTRDQYIYNSTFSPFAVALTRQK---------------------ENLDHVKTQKDPTDIGKNIINMDHDAQVKTALKDFSVLAFSSKRAGKKDVEALAYASLGVMYDNQEEYFSAVENYKLYLHLSQELNDSIGAAAACNCIG 156          
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Match: A0A078AHX3_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078AHX3_STYLE)

HSP 1 Score: 74.3 bits (181), Expect = 2.660e-12
Identity = 32/76 (42.11%), Postives = 52/76 (68.42%), Query Frame = 0
Query:  108 NHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMGQYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG 183
            N  + +  + DY++LAF+ +R+G+   EG AYYS GV  D++G+Y +A++ YK+FL VCK + D   E + +NC+G
Sbjct:  126 NRIAAQKRLKDYNILAFACKRAGKSRDEGRAYYSTGVLYDNLGKYKQAIDQYKRFLQVCKAIGDVHGEALSYNCIG 201          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig5508.15765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LE14_ECTSI9.380e-12398.36TPR Domain containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LCZ2_9PHAE6.990e-9678.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C9X6_9STRA7.710e-3445.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2C237_9STRA7.550e-3341.82Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2UWM0_9STRA6.270e-2536.81Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RJ11_9STRA3.290e-2136.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J8NP76_HALGN1.070e-1232.10Uncharacterized protein n=1 Tax=Halteria grandinel... [more]
J9JA71_9SPIT1.440e-1242.11TPR Domain containing protein n=1 Tax=Oxytricha tr... [more]
A0A482SQ84_9ARCH1.960e-1230.91Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A078AHX3_STYLE2.660e-1242.11Uncharacterized protein n=1 Tax=Stylonychia lemnae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 77..183
e-value: 3.9E-7
score: 31.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 112..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig5508contigEcto-sp13_S_contig5508:1603..5163 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig5508.15765.1mRNA_Ecto-sp13_S_contig5508.15765.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig5508 1601..5163 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig5508.15765.1 ID=prot_Ecto-sp13_S_contig5508.15765.1|Name=mRNA_Ecto-sp13_S_contig5508.15765.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
GFHDDGDRSPPGTNSNGHRRFGRVDTPLRVEPPPSFNAPARPVDQTQDQQ
IKASAFSPAAFTMRKYEMPSSSQGLLGSKDSAGGSSTASLVGSLRQRQEP
TKRDLTENHASYRIAMSDYHMLAFSSQRSGRHEMEGLAYYSAGVTMDSMG
QYPKAMENYKKFLAVCKTLKDPFIEGVCHNCMG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf